Protein–RNA interactions for Protein: Q8NEP7

KLHDC9, Kelch domain-containing protein 9, humanhuman

Predictions only

Length 349 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KLHDC9Q8NEP7 AC021188.1-201ENST00000421534 740 ntTSL 3 BASIC19.91■□□□□ 0.78
KLHDC9Q8NEP7 AL135791.1-201ENST00000429214 826 ntTSL 5 BASIC19.91■□□□□ 0.78
KLHDC9Q8NEP7 KRT18P2-201ENST00000447938 1258 ntBASIC19.91■□□□□ 0.78
KLHDC9Q8NEP7 AC007364.1-201ENST00000449714 1022 ntTSL 2 BASIC19.91■□□□□ 0.78
KLHDC9Q8NEP7 CDKN2A-209ENST00000498628 926 ntTSL 2 BASIC19.91■□□□□ 0.78
KLHDC9Q8NEP7 AL137786.1-202ENST00000555496 789 ntTSL 5 BASIC19.91■□□□□ 0.78
KLHDC9Q8NEP7 ARHGDIA-208ENST00000581876 709 ntTSL 3 BASIC19.91■□□□□ 0.78
KLHDC9Q8NEP7 ELOF1-204ENST00000587806 1172 ntTSL 2 BASIC19.91■□□□□ 0.78
KLHDC9Q8NEP7 COPE-211ENST00000600932 1144 ntTSL 5 BASIC19.91■□□□□ 0.78
KLHDC9Q8NEP7 MIR1199-201ENST00000621445 119 ntBASIC19.91■□□□□ 0.78
KLHDC9Q8NEP7 AC005593.1-201ENST00000624894 515 ntBASIC19.91■□□□□ 0.78
KLHDC9Q8NEP7 LAYN-203ENST00000436913 2590 ntTSL 2 BASIC19.91■□□□□ 0.78
KLHDC9Q8NEP7 AMDHD2-203ENST00000413459 2049 ntTSL 2 BASIC19.91■□□□□ 0.78
KLHDC9Q8NEP7 AC005332.7-201ENST00000614046 2005 ntBASIC19.91■□□□□ 0.78
KLHDC9Q8NEP7 RBFOX1-222ENST00000585867 1580 ntTSL 2 BASIC19.91■□□□□ 0.78
KLHDC9Q8NEP7 CFC1-202ENST00000615342 1554 ntTSL 5 BASIC19.91■□□□□ 0.78
KLHDC9Q8NEP7 P2RY6-209ENST00000540342 1611 ntAPPRIS P1 TSL 2 BASIC19.91■□□□□ 0.78
KLHDC9Q8NEP7 GALNT10-202ENST00000377661 3778 ntTSL 5 BASIC19.9■□□□□ 0.78
KLHDC9Q8NEP7 AC004817.3-201ENST00000602957 2129 ntBASIC19.9■□□□□ 0.78
KLHDC9Q8NEP7 GGN-201ENST00000334928 2239 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
KLHDC9Q8NEP7 NECTIN1-202ENST00000340882 1059 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
KLHDC9Q8NEP7 AL355310.2-201ENST00000369843 688 ntTSL 3 BASIC19.9■□□□□ 0.78
KLHDC9Q8NEP7 TRIM36-203ENST00000379618 693 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
KLHDC9Q8NEP7 MCFD2-205ENST00000409218 648 ntAPPRIS P1 TSL 2 BASIC19.9■□□□□ 0.78
KLHDC9Q8NEP7 AL122058.1-202ENST00000426580 252 ntTSL 3 BASIC19.9■□□□□ 0.78
KLHDC9Q8NEP7 AP006288.1-201ENST00000446065 395 ntBASIC19.9■□□□□ 0.78
KLHDC9Q8NEP7 LINC00237-202ENST00000455890 1220 ntTSL 2 BASIC19.9■□□□□ 0.78
KLHDC9Q8NEP7 AC126696.3-201ENST00000563993 575 ntTSL 4 BASIC19.9■□□□□ 0.78
KLHDC9Q8NEP7 COX5A-206ENST00000568783 571 ntTSL 3 BASIC19.9■□□□□ 0.78
KLHDC9Q8NEP7 AP002449.1-201ENST00000588211 474 ntTSL 2 BASIC19.9■□□□□ 0.78
KLHDC9Q8NEP7 LINC02084-201ENST00000606069 1096 ntBASIC19.9■□□□□ 0.78
KLHDC9Q8NEP7 KNOP1-205ENST00000568230 1311 ntAPPRIS ALT2 TSL 5 BASIC19.9■□□□□ 0.78
KLHDC9Q8NEP7 FNDC8-201ENST00000158009 1388 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
KLHDC9Q8NEP7 LCA10-201ENST00000618311 1392 ntTSL 2 BASIC19.9■□□□□ 0.78
KLHDC9Q8NEP7 CBLC-202ENST00000341505 1441 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
KLHDC9Q8NEP7 AC010460.3-201ENST00000511359 1579 ntBASIC19.9■□□□□ 0.78
KLHDC9Q8NEP7 ACP5-201ENST00000218758 1630 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
KLHDC9Q8NEP7 HLA-A-203ENST00000376809 1611 ntAPPRIS P1 BASIC19.9■□□□□ 0.78
KLHDC9Q8NEP7 JMJD6-202ENST00000397625 1603 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
KLHDC9Q8NEP7 PRICKLE4-204ENST00000458694 1646 ntAPPRIS P2 TSL 5 BASIC19.9■□□□□ 0.78
KLHDC9Q8NEP7 ABI3-202ENST00000419580 1718 ntAPPRIS P1 TSL 5 BASIC19.9■□□□□ 0.78
KLHDC9Q8NEP7 CRELD1-206ENST00000452070 1778 ntAPPRIS P1 TSL 2 BASIC19.9■□□□□ 0.78
KLHDC9Q8NEP7 TRIM7-205ENST00000422067 1954 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
KLHDC9Q8NEP7 HTR1E-201ENST00000305344 2052 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
KLHDC9Q8NEP7 CTNNBL1-204ENST00000405275 2076 ntTSL 5 BASIC19.9■□□□□ 0.78
KLHDC9Q8NEP7 CDO1-201ENST00000250535 1860 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
KLHDC9Q8NEP7 DUOXA1-201ENST00000267803 1996 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
KLHDC9Q8NEP7 FFAR3-201ENST00000327809 1796 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
KLHDC9Q8NEP7 AQP12A-201ENST00000337801 1084 ntAPPRIS ALT2 TSL 1 (best) BASIC19.89■□□□□ 0.77
KLHDC9Q8NEP7 HELT-201ENST00000338875 1008 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
KLHDC9Q8NEP7 IGKV4-1-201ENST00000390243 538 ntAPPRIS P1 BASIC19.89■□□□□ 0.77
KLHDC9Q8NEP7 SNHG11-205ENST00000421599 1046 ntTSL 3 BASIC19.89■□□□□ 0.77
KLHDC9Q8NEP7 RBM6-204ENST00000422955 2324 ntTSL 2 BASIC19.89■□□□□ 0.77
KLHDC9Q8NEP7 MCCD1P2-201ENST00000423228 335 ntBASIC19.89■□□□□ 0.77
KLHDC9Q8NEP7 MED15P9-202ENST00000427638 1841 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
KLHDC9Q8NEP7 PAX4-204ENST00000463946 1613 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
KLHDC9Q8NEP7 AC108751.1-201ENST00000490852 363 ntBASIC19.89■□□□□ 0.77
KLHDC9Q8NEP7 LINC02123-201ENST00000514869 885 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
KLHDC9Q8NEP7 ST3GAL4-209ENST00000526727 1967 ntAPPRIS ALT1 TSL 1 (best) BASIC19.89■□□□□ 0.77
KLHDC9Q8NEP7 ADM-207ENST00000530439 1839 ntTSL 2 BASIC19.89■□□□□ 0.77
KLHDC9Q8NEP7 CPSF1-207ENST00000531727 704 ntTSL 3 BASIC19.89■□□□□ 0.77
KLHDC9Q8NEP7 H2AFJ-203ENST00000544848 644 ntAPPRIS P1 BASIC19.89■□□□□ 0.77
KLHDC9Q8NEP7 AC012645.3-201ENST00000568506 470 ntTSL 3 BASIC19.89■□□□□ 0.77
KLHDC9Q8NEP7 GPX3-209ENST00000614343 1478 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
KLHDC9Q8NEP7 LCE1E-203ENST00000619588 267 ntAPPRIS ALT2 TSL 5 BASIC19.89■□□□□ 0.77
KLHDC9Q8NEP7 NPAS4-204ENST00000639555 878 ntTSL 5 BASIC19.89■□□□□ 0.77
KLHDC9Q8NEP7 GLT1D1-204ENST00000442111 2995 ntAPPRIS P1 TSL 5 BASIC19.89■□□□□ 0.77
KLHDC9Q8NEP7 CNTNAP3B-202ENST00000341990 2666 ntTSL 2 BASIC19.89■□□□□ 0.77
KLHDC9Q8NEP7 MGAT3-201ENST00000341184 5062 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
KLHDC9Q8NEP7 KHNYN-206ENST00000556842 2443 ntAPPRIS P1 TSL 2 BASIC19.88■□□□□ 0.77
KLHDC9Q8NEP7 ERCC2-203ENST00000391944 2334 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
KLHDC9Q8NEP7 DUS1L-202ENST00000354321 2151 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
KLHDC9Q8NEP7 CSK-202ENST00000439220 1900 ntAPPRIS P1 TSL 2 BASIC19.88■□□□□ 0.77
KLHDC9Q8NEP7 SH3BP5-203ENST00000408919 1880 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
KLHDC9Q8NEP7 MAGI2-201ENST00000354212 6880 ntAPPRIS P3 TSL 1 (best) BASIC19.88■□□□□ 0.77
KLHDC9Q8NEP7 TRMT44-205ENST00000513449 1666 ntAPPRIS ALT2 TSL 1 (best) BASIC19.88■□□□□ 0.77
KLHDC9Q8NEP7 AC083864.1-201ENST00000381493 1497 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
KLHDC9Q8NEP7 MED29-202ENST00000594368 1471 ntTSL 2 BASIC19.88■□□□□ 0.77
KLHDC9Q8NEP7 HMGCLL1-202ENST00000308161 1314 ntTSL 2 BASIC19.88■□□□□ 0.77
KLHDC9Q8NEP7 AC022898.2-201ENST00000616822 1312 ntBASIC19.88■□□□□ 0.77
KLHDC9Q8NEP7 TNNT1-201ENST00000291901 967 ntAPPRIS ALT2 TSL 1 (best) BASIC19.88■□□□□ 0.77
KLHDC9Q8NEP7 VMO1-202ENST00000354194 651 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
KLHDC9Q8NEP7 CD99-204ENST00000381187 892 ntAPPRIS ALT2 TSL 2 BASIC19.88■□□□□ 0.77
KLHDC9Q8NEP7 ODF3B-204ENST00000405135 917 ntTSL 5 BASIC19.88■□□□□ 0.77
KLHDC9Q8NEP7 SPDYE21P-201ENST00000413323 827 ntBASIC19.88■□□□□ 0.77
KLHDC9Q8NEP7 PLA2G12A-202ENST00000502283 1189 ntAPPRIS ALT2 TSL 1 (best) BASIC19.88■□□□□ 0.77
KLHDC9Q8NEP7 AC136632.2-201ENST00000512891 861 ntBASIC19.88■□□□□ 0.77
KLHDC9Q8NEP7 EFCAB1-209ENST00000523092 648 ntTSL 2 BASIC19.88■□□□□ 0.77
KLHDC9Q8NEP7 AC130456.4-201ENST00000568635 665 ntTSL 2 BASIC19.88■□□□□ 0.77
KLHDC9Q8NEP7 GABBR2-201ENST00000259455 5788 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
KLHDC9Q8NEP7 AC005082.1-201ENST00000413042 2259 ntBASIC19.88■□□□□ 0.77
KLHDC9Q8NEP7 PHLPP1-201ENST00000262719 6390 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
KLHDC9Q8NEP7 NDN-201ENST00000331837 1931 ntAPPRIS P1 BASIC19.88■□□□□ 0.77
KLHDC9Q8NEP7 PTPRJ-208ENST00000615445 4773 ntAPPRIS ALT2 TSL 5 BASIC19.88■□□□□ 0.77
KLHDC9Q8NEP7 CACNB3-202ENST00000536187 1872 ntTSL 2 BASIC19.88■□□□□ 0.77
KLHDC9Q8NEP7 LAPTM4B-204ENST00000619747 2758 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
KLHDC9Q8NEP7 HEXDC-203ENST00000577944 1820 ntTSL 5 BASIC19.88■□□□□ 0.77
KLHDC9Q8NEP7 FAM110A-203ENST00000381939 1737 ntAPPRIS P1 TSL 3 BASIC19.88■□□□□ 0.77
KLHDC9Q8NEP7 SWSAP1-201ENST00000312423 1684 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
KLHDC9Q8NEP7 SEMA3D-202ENST00000444867 1605 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
Retrieved 100 of 98,524 protein–RNA pairs in 48 ms