Protein–RNA interactions for Protein: Q8IZC6

COL27A1, Collagen alpha-1(XXVII) chain, humanhuman

Predicted RBP Predictions only

Length 1,860 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL27A1Q8IZC6 LMX1B-203ENST00000526117 1195 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
COL27A1Q8IZC6 AL390334.1-205ENST00000555797 411 ntTSL 3 BASIC16.97■□□□□ 0.31
COL27A1Q8IZC6 AL121820.2-201ENST00000556301 279 ntTSL 2 BASIC16.97■□□□□ 0.31
COL27A1Q8IZC6 RIN3-211ENST00000557762 517 ntTSL 3 BASIC16.97■□□□□ 0.31
COL27A1Q8IZC6 DCTPP1-204ENST00000568434 853 ntTSL 2 BASIC16.97■□□□□ 0.31
COL27A1Q8IZC6 RAB3IP-202ENST00000362025 2055 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
COL27A1Q8IZC6 AP004609.1-201ENST00000498872 1646 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
COL27A1Q8IZC6 ZNF324B-202ENST00000545523 2368 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
COL27A1Q8IZC6 USP21-203ENST00000368002 2342 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
COL27A1Q8IZC6 CDCA4-201ENST00000336219 2513 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
COL27A1Q8IZC6 SLC25A27-202ENST00000411689 2526 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
COL27A1Q8IZC6 AZIN2-203ENST00000373441 1443 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
COL27A1Q8IZC6 NPR3-203ENST00000415167 1753 ntAPPRIS P3 TSL 1 (best) BASIC16.97■□□□□ 0.31
COL27A1Q8IZC6 AC022898.2-201ENST00000616822 1312 ntBASIC16.97■□□□□ 0.31
COL27A1Q8IZC6 TPCN2-208ENST00000637342 2856 ntTSL 5 BASIC16.97■□□□□ 0.31
COL27A1Q8IZC6 DUSP12-201ENST00000367943 1270 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
COL27A1Q8IZC6 MCCD1P2-201ENST00000423228 335 ntBASIC16.97■□□□□ 0.31
COL27A1Q8IZC6 AP005019.1-201ENST00000545254 664 ntTSL 3 BASIC16.97■□□□□ 0.31
COL27A1Q8IZC6 LINC00668-203ENST00000579012 605 ntTSL 3 BASIC16.97■□□□□ 0.31
COL27A1Q8IZC6 ARHGDIA-208ENST00000581876 709 ntTSL 3 BASIC16.97■□□□□ 0.31
COL27A1Q8IZC6 PGS1-201ENST00000262764 2201 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
COL27A1Q8IZC6 ZNF331-214ENST00000511154 2120 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
COL27A1Q8IZC6 REEP4-201ENST00000306306 1710 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
COL27A1Q8IZC6 ACP5-201ENST00000218758 1630 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
COL27A1Q8IZC6 ATAD3A-202ENST00000378755 2612 ntTSL 2 BASIC16.96■□□□□ 0.31
COL27A1Q8IZC6 COLEC11-206ENST00000403096 1557 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
COL27A1Q8IZC6 VAV1-210ENST00000602142 2620 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
COL27A1Q8IZC6 TOR3A-201ENST00000352445 1182 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
COL27A1Q8IZC6 TRIM36-203ENST00000379618 693 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
COL27A1Q8IZC6 JMJD7-203ENST00000408047 1192 ntTSL 5 BASIC16.96■□□□□ 0.31
COL27A1Q8IZC6 SPDYE21P-201ENST00000413323 827 ntBASIC16.96■□□□□ 0.31
COL27A1Q8IZC6 SNHG11-204ENST00000420006 720 ntTSL 3 BASIC16.96■□□□□ 0.31
COL27A1Q8IZC6 AL122058.1-202ENST00000426580 252 ntTSL 3 BASIC16.96■□□□□ 0.31
COL27A1Q8IZC6 SNHG11-206ENST00000432153 1181 ntTSL 3 BASIC16.96■□□□□ 0.31
COL27A1Q8IZC6 METTL21AP1-201ENST00000438852 635 ntBASIC16.96■□□□□ 0.31
COL27A1Q8IZC6 GSTZ1-207ENST00000553586 979 ntAPPRIS ALT1 TSL 5 BASIC16.96■□□□□ 0.31
COL27A1Q8IZC6 AC092718.3-202ENST00000564536 1032 ntAPPRIS P5 TSL 5 BASIC16.96■□□□□ 0.31
COL27A1Q8IZC6 AC018845.2-201ENST00000568326 409 ntBASIC16.96■□□□□ 0.31
COL27A1Q8IZC6 TCAP-202ENST00000578283 583 ntTSL 5 BASIC16.96■□□□□ 0.31
COL27A1Q8IZC6 LPAR3-201ENST00000370611 1720 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
COL27A1Q8IZC6 ARHGAP22-203ENST00000374172 2380 ntTSL 2 BASIC16.96■□□□□ 0.31
COL27A1Q8IZC6 TINAGL1-202ENST00000457433 2140 ntAPPRIS ALT2 TSL 2 BASIC16.96■□□□□ 0.31
COL27A1Q8IZC6 AP001351.1-201ENST00000501397 1865 ntTSL 2 BASIC16.96■□□□□ 0.3
COL27A1Q8IZC6 TSPAN17-202ENST00000310032 2550 ntTSL 5 BASIC16.96■□□□□ 0.3
COL27A1Q8IZC6 BAIAP2L2-201ENST00000332536 2065 ntAPPRIS ALT2 TSL 5 BASIC16.96■□□□□ 0.3
COL27A1Q8IZC6 FOXP3-206ENST00000557224 1371 ntTSL 2 BASIC16.96■□□□□ 0.3
COL27A1Q8IZC6 CXXC1-202ENST00000412036 2280 ntAPPRIS ALT1 TSL 1 (best) BASIC16.96■□□□□ 0.3
COL27A1Q8IZC6 PHYHD1-201ENST00000308941 1599 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
COL27A1Q8IZC6 PCBP3-206ENST00000400314 2202 ntAPPRIS P2 TSL 5 BASIC16.95■□□□□ 0.3
COL27A1Q8IZC6 ZNF579-201ENST00000325421 2899 ntAPPRIS P1 TSL 2 BASIC16.95■□□□□ 0.3
COL27A1Q8IZC6 DHRS7-212ENST00000611054 1321 ntTSL 5 BASIC16.95■□□□□ 0.3
COL27A1Q8IZC6 PPP1R7-202ENST00000272983 1954 ntTSL 2 BASIC16.95■□□□□ 0.3
COL27A1Q8IZC6 GYG2P1-204ENST00000382966 639 ntTSL 3 BASIC16.95■□□□□ 0.3
COL27A1Q8IZC6 HDAC11-202ENST00000402259 1000 ntTSL 3 BASIC16.95■□□□□ 0.3
COL27A1Q8IZC6 ATP6V0C-202ENST00000564973 1081 ntTSL 2 BASIC16.95■□□□□ 0.3
COL27A1Q8IZC6 COX5A-206ENST00000568783 571 ntTSL 3 BASIC16.95■□□□□ 0.3
COL27A1Q8IZC6 AL022326.1-202ENST00000641533 845 ntBASIC16.95■□□□□ 0.3
COL27A1Q8IZC6 KLC2-204ENST00000394067 2898 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
COL27A1Q8IZC6 FDXR-205ENST00000544854 1827 ntTSL 2 BASIC16.95■□□□□ 0.3
COL27A1Q8IZC6 OPN3-201ENST00000366554 2620 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
COL27A1Q8IZC6 ZNF561-AS1-204ENST00000587536 1799 ntTSL 2 BASIC16.95■□□□□ 0.3
COL27A1Q8IZC6 HNRNPLL-203ENST00000378915 2523 ntTSL 5 BASIC16.95■□□□□ 0.3
COL27A1Q8IZC6 KIAA0895-204ENST00000415803 2865 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
COL27A1Q8IZC6 SRPX-202ENST00000432886 1725 ntTSL 2 BASIC16.95■□□□□ 0.3
COL27A1Q8IZC6 FAM129C-201ENST00000332386 2222 ntAPPRIS ALT2 TSL 1 (best) BASIC16.95■□□□□ 0.3
COL27A1Q8IZC6 PCDHB2-202ENST00000622947 2231 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
COL27A1Q8IZC6 CHGA-202ENST00000334654 1474 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
COL27A1Q8IZC6 PDP1-208ENST00000520728 2554 ntAPPRIS P3 TSL 1 (best) BASIC16.95■□□□□ 0.3
COL27A1Q8IZC6 RCN1-201ENST00000054950 2572 ntAPPRIS P2 TSL 1 (best) BASIC16.95■□□□□ 0.3
COL27A1Q8IZC6 LRRC36-201ENST00000329956 2395 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
COL27A1Q8IZC6 TMEM147-201ENST00000222284 899 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
COL27A1Q8IZC6 UPK2-201ENST00000264031 916 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
COL27A1Q8IZC6 HIST1H2BL-201ENST00000377401 488 ntAPPRIS P1 BASIC16.95■□□□□ 0.3
COL27A1Q8IZC6 ESR1-204ENST00000406599 1251 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
COL27A1Q8IZC6 YBX1P5-201ENST00000509441 847 ntBASIC16.95■□□□□ 0.3
COL27A1Q8IZC6 FAU-209ENST00000531743 697 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
COL27A1Q8IZC6 CR381653.1-203ENST00000625153 577 ntTSL 5 BASIC16.95■□□□□ 0.3
COL27A1Q8IZC6 DMRT3-201ENST00000190165 2183 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
COL27A1Q8IZC6 ATIC-205ENST00000435675 2275 ntTSL 2 BASIC16.94■□□□□ 0.3
COL27A1Q8IZC6 CBX1-201ENST00000225603 2232 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
COL27A1Q8IZC6 LBHD1-210ENST00000532208 1508 ntAPPRIS P2 TSL 5 BASIC16.94■□□□□ 0.3
COL27A1Q8IZC6 IRF3-203ENST00000377139 1613 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
COL27A1Q8IZC6 KLC1-217ENST00000554280 2426 ntTSL 5 BASIC16.94■□□□□ 0.3
COL27A1Q8IZC6 SP100-208ENST00000427101 1922 ntTSL 2 BASIC16.94■□□□□ 0.3
COL27A1Q8IZC6 C6orf48-203ENST00000375638 847 ntAPPRIS P1 TSL 2 BASIC16.94■□□□□ 0.3
COL27A1Q8IZC6 C6orf48-207ENST00000375642 962 ntAPPRIS P1 TSL 2 BASIC16.94■□□□□ 0.3
COL27A1Q8IZC6 PTTG1-202ENST00000393964 1070 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
COL27A1Q8IZC6 AC097532.1-201ENST00000440802 322 ntTSL 2 BASIC16.94■□□□□ 0.3
COL27A1Q8IZC6 PRYP5-201ENST00000451909 266 ntBASIC16.94■□□□□ 0.3
COL27A1Q8IZC6 TMEM106C-214ENST00000550161 976 ntTSL 3 BASIC16.94■□□□□ 0.3
COL27A1Q8IZC6 AL442663.3-201ENST00000554737 1000 ntTSL 3 BASIC16.94■□□□□ 0.3
COL27A1Q8IZC6 LYRM1-209ENST00000568663 857 ntAPPRIS P1 TSL 4 BASIC16.94■□□□□ 0.3
COL27A1Q8IZC6 COQ7-208ENST00000568985 714 ntAPPRIS P3 TSL 2 BASIC16.94■□□□□ 0.3
COL27A1Q8IZC6 AC012617.1-203ENST00000590845 439 ntTSL 2 BASIC16.94■□□□□ 0.3
COL27A1Q8IZC6 AC027612.4-201ENST00000605371 583 ntBASIC16.94■□□□□ 0.3
COL27A1Q8IZC6 AC006504.4-201ENST00000592118 1568 ntBASIC16.94■□□□□ 0.3
COL27A1Q8IZC6 PTCHD3-202ENST00000622555 1720 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
COL27A1Q8IZC6 TSEN34-202ENST00000396383 1548 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
COL27A1Q8IZC6 ABHD14B-203ENST00000395008 1818 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
COL27A1Q8IZC6 INO80E-207ENST00000563197 2103 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Retrieved 100 of 98,524 protein–RNA pairs in 18.7 ms