Protein–RNA interactions for Protein: Q86UQ8

NFE4, Transcription factor NF-E4, humanhuman

Predictions only

Length 179 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NFE4Q86UQ8 TMEM74-201ENST00000297459 1741 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
NFE4Q86UQ8 ITSN2-201ENST00000355123 6300 ntAPPRIS P4 TSL 1 (best) BASIC13.02□□□□□ -0.33
NFE4Q86UQ8 ZNF114-206ENST00000600687 1742 ntAPPRIS P1 TSL 5 BASIC13.02□□□□□ -0.33
NFE4Q86UQ8 THOP1-205ENST00000586677 1872 ntTSL 2 BASIC13.02□□□□□ -0.33
NFE4Q86UQ8 PARD3-206ENST00000374776 3389 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
NFE4Q86UQ8 BECN1-201ENST00000361523 2112 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
NFE4Q86UQ8 PRPF19-201ENST00000227524 2157 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
NFE4Q86UQ8 MFSD2A-202ENST00000372811 2154 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
NFE4Q86UQ8 FBXO18-203ENST00000397269 3640 ntTSL 5 BASIC13.01□□□□□ -0.33
NFE4Q86UQ8 SH3BP5-206ENST00000426925 2190 ntTSL 2 BASIC13.01□□□□□ -0.33
NFE4Q86UQ8 NOL4L-211ENST00000621426 6577 ntAPPRIS P2 TSL 5 BASIC13.01□□□□□ -0.33
NFE4Q86UQ8 DHX33-202ENST00000433302 2225 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
NFE4Q86UQ8 SPATC1L-201ENST00000291672 2303 ntAPPRIS P1 TSL 2 BASIC13.01□□□□□ -0.33
NFE4Q86UQ8 ADGRB2-201ENST00000373655 5400 ntAPPRIS P4 TSL 1 (best) BASIC13.01□□□□□ -0.33
NFE4Q86UQ8 WNT5B-202ENST00000397196 2303 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
NFE4Q86UQ8 GDPD5-214ENST00000533784 2441 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
NFE4Q86UQ8 DCAF12L2-201ENST00000360028 2599 ntAPPRIS P1 BASIC13.01□□□□□ -0.33
NFE4Q86UQ8 AP5B1-201ENST00000532090 4811 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
NFE4Q86UQ8 CENPA-201ENST00000233505 1299 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
NFE4Q86UQ8 EMC6-201ENST00000248378 653 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
NFE4Q86UQ8 KIAA1522-201ENST00000294521 878 ntAPPRIS ALT2 TSL 2 BASIC13.01□□□□□ -0.33
NFE4Q86UQ8 HLA-DRB1-201ENST00000360004 1229 ntAPPRIS P1 BASIC13.01□□□□□ -0.33
NFE4Q86UQ8 ID1-202ENST00000376112 994 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
NFE4Q86UQ8 MAP1LC3A-203ENST00000397709 698 ntAPPRIS P1 TSL 3 BASIC13.01□□□□□ -0.33
NFE4Q86UQ8 MIR1238-201ENST00000408483 83 ntBASIC13.01□□□□□ -0.33
NFE4Q86UQ8 AC004951.3-201ENST00000418645 1148 ntBASIC13.01□□□□□ -0.33
NFE4Q86UQ8 ATP5S-204ENST00000426751 1171 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
NFE4Q86UQ8 PTPA-216ENST00000432651 857 ntTSL 2 BASIC13.01□□□□□ -0.33
NFE4Q86UQ8 HRASLS5-205ENST00000539221 1167 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
NFE4Q86UQ8 FITM1-202ENST00000559294 800 ntBASIC13.01□□□□□ -0.33
NFE4Q86UQ8 AQP4-AS1-204ENST00000582605 525 ntTSL 4 BASIC13.01□□□□□ -0.33
NFE4Q86UQ8 RENBP-202ENST00000393700 1388 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
NFE4Q86UQ8 GPBAR1-202ENST00000519574 1382 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
NFE4Q86UQ8 C6orf89-203ENST00000373685 1400 ntAPPRIS ALT2 TSL 5 BASIC13.01□□□□□ -0.33
NFE4Q86UQ8 BTBD1-202ENST00000379403 1467 ntTSL 5 BASIC13.01□□□□□ -0.33
NFE4Q86UQ8 AMACR-206ENST00000502637 1598 ntTSL 5 BASIC13.01□□□□□ -0.33
NFE4Q86UQ8 AUP1-201ENST00000377526 1695 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
NFE4Q86UQ8 FARSA-202ENST00000423140 1720 ntTSL 2 BASIC13.01□□□□□ -0.33
NFE4Q86UQ8 CAMK2G-205ENST00000372765 1822 ntTSL 5 BASIC13.01□□□□□ -0.33
NFE4Q86UQ8 SPON2-203ENST00000431380 1802 ntAPPRIS P1 TSL 5 BASIC13.01□□□□□ -0.33
NFE4Q86UQ8 HNF1B-202ENST00000614313 1819 ntTSL 5 BASIC13.01□□□□□ -0.33
NFE4Q86UQ8 HNF1B-203ENST00000617272 1820 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
NFE4Q86UQ8 SULT1A1-204ENST00000395609 1871 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
NFE4Q86UQ8 C16orf59-204ENST00000563531 1864 ntAPPRIS ALT2 TSL 5 BASIC13.01□□□□□ -0.33
NFE4Q86UQ8 PRRT1-201ENST00000211413 1909 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
NFE4Q86UQ8 CLDN9-201ENST00000445369 2050 ntAPPRIS P1 BASIC13.01□□□□□ -0.33
NFE4Q86UQ8 SMPD3-211ENST00000568373 2073 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
NFE4Q86UQ8 AC005865.2-201ENST00000505276 2303 ntTSL 2 BASIC13.01□□□□□ -0.33
NFE4Q86UQ8 SLX1B-SULT1A4-201ENST00000344620 2424 ntTSL 2 BASIC13.01□□□□□ -0.33
NFE4Q86UQ8 AC135776.1-201ENST00000319817 2481 ntBASIC13.01□□□□□ -0.33
NFE4Q86UQ8 LINC01502-201ENST00000445997 2471 ntTSL 2 BASIC13.01□□□□□ -0.33
NFE4Q86UQ8 GPER1-202ENST00000397088 2639 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
NFE4Q86UQ8 RARA-206ENST00000425707 3041 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
NFE4Q86UQ8 DIP2A-204ENST00000457905 3044 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
NFE4Q86UQ8 GOSR1-201ENST00000225724 6039 ntAPPRIS P3 TSL 1 (best) BASIC13.01□□□□□ -0.33
NFE4Q86UQ8 MCF2L-203ENST00000375604 6445 ntAPPRIS P3 TSL 2 BASIC13.01□□□□□ -0.33
NFE4Q86UQ8 MYO1B-204ENST00000392318 5082 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
NFE4Q86UQ8 MFSD11-202ENST00000355954 2832 ntTSL 1 (best) BASIC13□□□□□ -0.33
NFE4Q86UQ8 PAK4-202ENST00000358301 2739 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
NFE4Q86UQ8 MCM9-201ENST00000316068 2442 ntTSL 1 (best) BASIC13□□□□□ -0.33
NFE4Q86UQ8 DIABLO-206ENST00000443649 2250 ntAPPRIS P1 TSL 2 BASIC13□□□□□ -0.33
NFE4Q86UQ8 PTPRF-209ENST00000438120 6377 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
NFE4Q86UQ8 FTCDNL1-204ENST00000622774 1997 ntTSL 1 (best) BASIC13□□□□□ -0.33
NFE4Q86UQ8 WIZ-201ENST00000263381 5695 ntAPPRIS P2 TSL 2 BASIC13□□□□□ -0.33
NFE4Q86UQ8 TSSK2-201ENST00000399635 1816 ntAPPRIS P1 BASIC13□□□□□ -0.33
NFE4Q86UQ8 PFN2-203ENST00000452853 1780 ntAPPRIS ALT1 TSL 1 (best) BASIC13□□□□□ -0.33
NFE4Q86UQ8 CYP2F1-201ENST00000331105 1720 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
NFE4Q86UQ8 AZU1-202ENST00000592205 1713 ntTSL 2 BASIC13□□□□□ -0.33
NFE4Q86UQ8 WWOX-202ENST00000402655 1594 ntTSL 1 (best) BASIC13□□□□□ -0.33
NFE4Q86UQ8 COQ9-210ENST00000567072 1482 ntTSL 3 BASIC13□□□□□ -0.33
NFE4Q86UQ8 SLC35E2-201ENST00000246421 1430 ntAPPRIS P3 TSL 1 (best) BASIC13□□□□□ -0.33
NFE4Q86UQ8 LRRC23-207ENST00000433346 1387 ntTSL 5 BASIC13□□□□□ -0.33
NFE4Q86UQ8 EDA-208ENST00000524573 1381 ntAPPRIS ALT1 TSL 1 (best) BASIC13□□□□□ -0.33
NFE4Q86UQ8 DDAH2-211ENST00000375787 1330 ntAPPRIS P1 TSL 5 BASIC13□□□□□ -0.33
NFE4Q86UQ8 KRT18P22-201ENST00000402024 1347 ntBASIC13□□□□□ -0.33
NFE4Q86UQ8 HBA1-201ENST00000320868 577 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
NFE4Q86UQ8 C9orf129-201ENST00000375419 1154 ntAPPRIS P1 TSL 5 BASIC13□□□□□ -0.33
NFE4Q86UQ8 AL731557.1-201ENST00000425264 744 ntTSL 3 BASIC13□□□□□ -0.33
NFE4Q86UQ8 AC004980.1-204ENST00000429707 299 ntBASIC13□□□□□ -0.33
NFE4Q86UQ8 ASPHD1-203ENST00000483405 1115 ntAPPRIS ALT2 TSL 3 BASIC13□□□□□ -0.33
NFE4Q86UQ8 AC128688.1-201ENST00000487626 519 ntBASIC13□□□□□ -0.33
NFE4Q86UQ8 CHCHD6-204ENST00000508789 1159 ntAPPRIS ALT2 TSL 1 (best) BASIC13□□□□□ -0.33
NFE4Q86UQ8 MLF2-210ENST00000542154 838 ntAPPRIS P1 TSL 5 BASIC13□□□□□ -0.33
NFE4Q86UQ8 AP005242.2-201ENST00000580065 1175 ntBASIC13□□□□□ -0.33
NFE4Q86UQ8 SMAGP-204ENST00000603838 816 ntTSL 2 BASIC13□□□□□ -0.33
NFE4Q86UQ8 AP000525.1-201ENST00000608286 694 ntBASIC13□□□□□ -0.33
NFE4Q86UQ8 AC097493.4-201ENST00000641197 219 ntBASIC13□□□□□ -0.33
NFE4Q86UQ8 LRRC58-201ENST00000295628 7903 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
NFE4Q86UQ8 AP000347.2-202ENST00000421064 3041 ntTSL 1 (best) BASIC13□□□□□ -0.33
NFE4Q86UQ8 SCAMP4-201ENST00000316097 2684 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
NFE4Q86UQ8 SPATA20-202ENST00000356488 2634 ntTSL 1 (best) BASIC13□□□□□ -0.33
NFE4Q86UQ8 ARHGAP27-214ENST00000532891 2604 ntAPPRIS ALT2 TSL 5 BASIC13□□□□□ -0.33
NFE4Q86UQ8 AQP1-204ENST00000441328 2487 ntTSL 1 (best) BASIC13□□□□□ -0.33
NFE4Q86UQ8 FAM208A-209ENST00000493960 5600 ntAPPRIS P2 TSL 5 BASIC13□□□□□ -0.33
NFE4Q86UQ8 SRGAP2B-207ENST00000641863 2367 ntAPPRIS P5 BASIC13□□□□□ -0.33
NFE4Q86UQ8 SLC39A1-211ENST00000621013 2322 ntAPPRIS P1 TSL 2 BASIC13□□□□□ -0.33
NFE4Q86UQ8 DUS1L-202ENST00000354321 2151 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
NFE4Q86UQ8 SCARB2-223ENST00000640640 4608 ntTSL 5 BASIC13□□□□□ -0.33
NFE4Q86UQ8 FBXO44-201ENST00000251546 1896 ntTSL 2 BASIC12.99□□□□□ -0.33
NFE4Q86UQ8 NAT9-201ENST00000357814 1875 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
Retrieved 100 of 98,524 protein–RNA pairs in 37 ms