Protein–RNA interactions for Protein: Q6S5L8

SHC4, SHC-transforming protein 4, humanhuman

Predictions only

Length 630 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHC4Q6S5L8 ACP6-201ENST00000392988 1555 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
SHC4Q6S5L8 UPF1-201ENST00000262803 5348 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
SHC4Q6S5L8 SCNN1D-201ENST00000325425 2679 ntAPPRIS ALT2 TSL 1 (best) BASIC20.45■□□□□ 0.86
SHC4Q6S5L8 DNAAF4-202ENST00000348518 1897 ntAPPRIS P1 TSL 5 BASIC20.45■□□□□ 0.86
SHC4Q6S5L8 STXBP2-202ENST00000414284 1859 ntAPPRIS ALT1 TSL 1 (best) BASIC20.45■□□□□ 0.86
SHC4Q6S5L8 YAP1-201ENST00000282441 5386 ntAPPRIS P3 TSL 1 (best) BASIC20.45■□□□□ 0.86
SHC4Q6S5L8 DCAF8-218ENST00000610139 1607 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
SHC4Q6S5L8 ILK-203ENST00000420936 1692 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
SHC4Q6S5L8 VRK3-225ENST00000601912 1668 ntAPPRIS ALT2 TSL 5 BASIC20.45■□□□□ 0.86
SHC4Q6S5L8 RAB29-205ENST00000446390 1441 ntTSL 2 BASIC20.44■□□□□ 0.86
SHC4Q6S5L8 STRN4-201ENST00000263280 3210 ntAPPRIS P3 TSL 1 (best) BASIC20.44■□□□□ 0.86
SHC4Q6S5L8 TBC1D10C-201ENST00000312390 1497 ntTSL 5 BASIC20.44■□□□□ 0.86
SHC4Q6S5L8 AL645608.8-201ENST00000606034 2086 ntBASIC20.44■□□□□ 0.86
SHC4Q6S5L8 ZSWIM4-201ENST00000254323 4339 ntAPPRIS P1 TSL 2 BASIC20.44■□□□□ 0.86
SHC4Q6S5L8 DTX2-202ENST00000413936 2472 ntAPPRIS P3 TSL 1 (best) BASIC20.44■□□□□ 0.86
SHC4Q6S5L8 LTBP3-202ENST00000322147 4046 ntAPPRIS P3 TSL 1 (best) BASIC20.44■□□□□ 0.86
SHC4Q6S5L8 AC008969.1-203ENST00000313957 1897 ntTSL 2 BASIC20.44■□□□□ 0.86
SHC4Q6S5L8 MAP3K13-213ENST00000454237 526 ntTSL 3 BASIC20.44■□□□□ 0.86
SHC4Q6S5L8 RPL39L-203ENST00000455270 653 ntAPPRIS P1 TSL 2 BASIC20.44■□□□□ 0.86
SHC4Q6S5L8 CD81-212ENST00000526072 1172 ntTSL 5 BASIC20.44■□□□□ 0.86
SHC4Q6S5L8 CENPS-CORT-205ENST00000602787 571 ntAPPRIS P1 TSL 3 BASIC20.44■□□□□ 0.86
SHC4Q6S5L8 FMR1-AS1_2.1-201ENST00000613724 127 ntBASIC20.44■□□□□ 0.86
SHC4Q6S5L8 GOLGA3-203ENST00000456883 5496 ntAPPRIS ALT2 TSL 1 (best) BASIC20.44■□□□□ 0.86
SHC4Q6S5L8 FAM234A-203ENST00000399932 3213 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
SHC4Q6S5L8 TLE3-201ENST00000317509 5207 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
SHC4Q6S5L8 AP5S1-201ENST00000246041 1960 ntAPPRIS P1 TSL 4 BASIC20.44■□□□□ 0.86
SHC4Q6S5L8 TMEM175-222ENST00000622959 1967 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
SHC4Q6S5L8 CTSB-204ENST00000453527 2011 ntAPPRIS P1 TSL 2 BASIC20.44■□□□□ 0.86
SHC4Q6S5L8 PTPN6-204ENST00000456013 2389 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
SHC4Q6S5L8 AC139713.2-201ENST00000641328 2723 ntBASIC20.44■□□□□ 0.86
SHC4Q6S5L8 FAM50A-202ENST00000393600 1352 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
SHC4Q6S5L8 JKAMP-201ENST00000261247 1726 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
SHC4Q6S5L8 MIEF2-204ENST00000395706 2441 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
SHC4Q6S5L8 GGA1-203ENST00000343632 3159 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
SHC4Q6S5L8 FAM13C-204ENST00000468840 2110 ntAPPRIS ALT2 TSL 2 BASIC20.44■□□□□ 0.86
SHC4Q6S5L8 PSMG4-209ENST00000473000 4603 ntTSL 2 BASIC20.44■□□□□ 0.86
SHC4Q6S5L8 VPS26A-202ENST00000373382 3229 ntAPPRIS P1 TSL 5 BASIC20.44■□□□□ 0.86
SHC4Q6S5L8 ARHGEF19-201ENST00000270747 3029 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
SHC4Q6S5L8 FLT1-207ENST00000615840 6453 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
SHC4Q6S5L8 SEL1L-204ENST00000555824 1631 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
SHC4Q6S5L8 CYB561D2-201ENST00000232508 1225 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
SHC4Q6S5L8 OCIAD2-201ENST00000273860 636 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
SHC4Q6S5L8 TSPAN14-202ENST00000341863 1037 ntTSL 5 BASIC20.43■□□□□ 0.86
SHC4Q6S5L8 RHOC-204ENST00000369633 1295 ntAPPRIS P1 TSL 3 BASIC20.43■□□□□ 0.86
SHC4Q6S5L8 ROMO1-202ENST00000374072 350 ntTSL 5 BASIC20.43■□□□□ 0.86
SHC4Q6S5L8 DMKN-208ENST00000424570 1293 ntAPPRIS ALT2 TSL 1 (best) BASIC20.43■□□□□ 0.86
SHC4Q6S5L8 AC074183.1-201ENST00000439105 782 ntTSL 5 BASIC20.43■□□□□ 0.86
SHC4Q6S5L8 SNCB-205ENST00000510387 730 ntAPPRIS P1 TSL 2 BASIC20.43■□□□□ 0.86
SHC4Q6S5L8 LINC00599-204ENST00000521242 716 ntTSL 3 BASIC20.43■□□□□ 0.86
SHC4Q6S5L8 AC010203.1-204ENST00000548782 407 ntBASIC20.43■□□□□ 0.86
SHC4Q6S5L8 AL132780.2-201ENST00000557615 1021 ntTSL 3 BASIC20.43■□□□□ 0.86
SHC4Q6S5L8 OCIAD2-210ENST00000620187 697 ntTSL 3 BASIC20.43■□□□□ 0.86
SHC4Q6S5L8 PCGF6-202ENST00000369847 2230 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
SHC4Q6S5L8 TCIRG1-201ENST00000265686 2677 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
SHC4Q6S5L8 RAB39A-201ENST00000320578 1830 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
SHC4Q6S5L8 KCNA2-201ENST00000316361 2827 ntAPPRIS P1 TSL 2 BASIC20.43■□□□□ 0.86
SHC4Q6S5L8 BPHL-203ENST00000380379 1928 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
SHC4Q6S5L8 APP-202ENST00000348990 3355 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
SHC4Q6S5L8 PNCK-203ENST00000370145 1455 ntTSL 2 BASIC20.43■□□□□ 0.86
SHC4Q6S5L8 TMEM216-203ENST00000515837 1958 ntAPPRIS P2 TSL 2 BASIC20.43■□□□□ 0.86
SHC4Q6S5L8 ZBTB16-201ENST00000335953 2523 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
SHC4Q6S5L8 AL034417.2-201ENST00000445300 2044 ntTSL 2 BASIC20.43■□□□□ 0.86
SHC4Q6S5L8 GYPC-202ENST00000356887 2067 ntAPPRIS ALT2 TSL 1 (best) BASIC20.42■□□□□ 0.86
SHC4Q6S5L8 LINC00602-201ENST00000629776 2065 ntBASIC20.42■□□□□ 0.86
SHC4Q6S5L8 CCDC7-203ENST00000362006 2133 ntAPPRIS P2 TSL 1 (best) BASIC20.42■□□□□ 0.86
SHC4Q6S5L8 JPT1-203ENST00000409753 1605 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
SHC4Q6S5L8 PSMD11-202ENST00000457654 2159 ntAPPRIS P1 TSL 2 BASIC20.42■□□□□ 0.86
SHC4Q6S5L8 SBF2-AS1-201ENST00000498905 2709 ntTSL 5 BASIC20.42■□□□□ 0.86
SHC4Q6S5L8 SLC22A7-201ENST00000372574 1822 ntAPPRIS ALT2 TSL 1 (best) BASIC20.42■□□□□ 0.86
SHC4Q6S5L8 SORCS2-203ENST00000507866 6152 ntAPPRIS P2 TSL 1 (best) BASIC20.42■□□□□ 0.86
SHC4Q6S5L8 NOMO3-202ENST00000399336 4356 ntAPPRIS P2 TSL 1 (best) BASIC20.42■□□□□ 0.86
SHC4Q6S5L8 SLC25A3P1-201ENST00000443844 931 ntBASIC20.42■□□□□ 0.86
SHC4Q6S5L8 ADCYAP1-202ENST00000450565 918 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
SHC4Q6S5L8 CBLN1-202ENST00000536749 718 ntAPPRIS P1 TSL 5 BASIC20.42■□□□□ 0.86
SHC4Q6S5L8 AL023973.1-201ENST00000624619 620 ntBASIC20.42■□□□□ 0.86
SHC4Q6S5L8 AC008735.6-201ENST00000635964 1292 ntAPPRIS P1 TSL 2 BASIC20.42■□□□□ 0.86
SHC4Q6S5L8 ASCC2-223ENST00000542393 2594 ntTSL 2 BASIC20.42■□□□□ 0.86
SHC4Q6S5L8 RTBDN-201ENST00000322912 1328 ntAPPRIS P3 TSL 1 (best) BASIC20.42■□□□□ 0.86
SHC4Q6S5L8 LUC7L-202ENST00000337351 2097 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
SHC4Q6S5L8 FAM53A-207ENST00000489363 2776 ntTSL 2 BASIC20.42■□□□□ 0.86
SHC4Q6S5L8 PTX4-201ENST00000293922 1422 ntAPPRIS P2 TSL 1 (best) BASIC20.42■□□□□ 0.86
SHC4Q6S5L8 LRRC20-203ENST00000358141 2924 ntTSL 2 BASIC20.42■□□□□ 0.86
SHC4Q6S5L8 EPS8L2-205ENST00000526198 2289 ntAPPRIS ALT2 TSL 1 (best) BASIC20.42■□□□□ 0.86
SHC4Q6S5L8 TBC1D2B-202ENST00000409931 6086 ntAPPRIS P3 TSL 1 (best) BASIC20.42■□□□□ 0.86
SHC4Q6S5L8 CORO6-210ENST00000580212 2345 ntTSL 5 BASIC20.42■□□□□ 0.86
SHC4Q6S5L8 SRP9-203ENST00000366839 1596 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
SHC4Q6S5L8 GPAT2P1-202ENST00000471661 1569 ntTSL 2 BASIC20.42■□□□□ 0.86
SHC4Q6S5L8 AL079301.1-201ENST00000424580 1633 ntTSL 2 BASIC20.42■□□□□ 0.86
SHC4Q6S5L8 PSRC1-203ENST00000369907 1717 ntAPPRIS P3 TSL 1 (best) BASIC20.41■□□□□ 0.86
SHC4Q6S5L8 FYTTD1-205ENST00000424384 1758 ntTSL 2 BASIC20.41■□□□□ 0.86
SHC4Q6S5L8 RIN1-201ENST00000311320 2693 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
SHC4Q6S5L8 PODN-203ENST00000395871 2744 ntTSL 5 BASIC20.41■□□□□ 0.86
SHC4Q6S5L8 KCNQ5-202ENST00000355194 6566 ntAPPRIS ALT1 TSL 5 BASIC20.41■□□□□ 0.86
SHC4Q6S5L8 KCNQ5-206ENST00000402622 6596 ntAPPRIS ALT2 TSL 5 BASIC20.41■□□□□ 0.86
SHC4Q6S5L8 HMGA1-201ENST00000311487 1920 ntAPPRIS P4 TSL 1 (best) BASIC20.41■□□□□ 0.86
SHC4Q6S5L8 AC005498.3-201ENST00000596587 2045 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
SHC4Q6S5L8 DUS3L-201ENST00000309061 2113 ntAPPRIS P3 TSL 1 (best) BASIC20.41■□□□□ 0.86
SHC4Q6S5L8 CFLAR-208ENST00000423241 2128 ntAPPRIS P3 TSL 1 (best) BASIC20.41■□□□□ 0.86
SHC4Q6S5L8 INPP4A-205ENST00000409851 3365 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
SHC4Q6S5L8 CEP83-AS1-201ENST00000623122 2482 ntBASIC20.41■□□□□ 0.86
Retrieved 100 of 98,524 protein–RNA pairs in 38.4 ms