Protein–RNA interactions for Protein: Q6Q0C0

TRAF7, E3 ubiquitin-protein ligase TRAF7, humanhuman

Predictions only

Length 670 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF7Q6Q0C0 AC011498.3-201ENST00000590159 569 ntTSL 4 BASIC19.68■□□□□ 0.74
TRAF7Q6Q0C0 CYGB-205ENST00000590175 830 ntTSL 3 BASIC19.68■□□□□ 0.74
TRAF7Q6Q0C0 Z83851.2-201ENST00000609564 659 ntBASIC19.68■□□□□ 0.74
TRAF7Q6Q0C0 AXIN2-208ENST00000611991 1019 ntTSL 5 BASIC19.68■□□□□ 0.74
TRAF7Q6Q0C0 C1QL3-202ENST00000619991 783 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
TRAF7Q6Q0C0 HMGN3-203ENST00000620514 1010 ntTSL 3 BASIC19.68■□□□□ 0.74
TRAF7Q6Q0C0 AC107918.4-202ENST00000641623 219 ntBASIC19.68■□□□□ 0.74
TRAF7Q6Q0C0 FOXP3-201ENST00000376197 1326 ntTSL 2 BASIC19.68■□□□□ 0.74
TRAF7Q6Q0C0 HOXB9-201ENST00000311177 2581 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
TRAF7Q6Q0C0 ZNF787-202ENST00000587279 1657 ntTSL 2 BASIC19.68■□□□□ 0.74
TRAF7Q6Q0C0 AC132938.6-201ENST00000623828 1655 ntBASIC19.68■□□□□ 0.74
TRAF7Q6Q0C0 C16orf70-208ENST00000569600 1353 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
TRAF7Q6Q0C0 ASMTL-201ENST00000381317 2027 ntAPPRIS P3 TSL 1 (best) BASIC19.68■□□□□ 0.74
TRAF7Q6Q0C0 UBE2N-201ENST00000318066 5186 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
TRAF7Q6Q0C0 IDH3G-202ENST00000370092 1712 ntTSL 5 BASIC19.68■□□□□ 0.74
TRAF7Q6Q0C0 SPAST-203ENST00000615843 5212 ntAPPRIS P4 TSL 1 (best) BASIC19.68■□□□□ 0.74
TRAF7Q6Q0C0 PDCD10-201ENST00000392750 2067 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
TRAF7Q6Q0C0 BTG3-202ENST00000348354 1456 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
TRAF7Q6Q0C0 IFNL4-204ENST00000634967 1493 ntAPPRIS ALT2 TSL 1 (best) BASIC19.67■□□□□ 0.74
TRAF7Q6Q0C0 GTF2IRD2-207ENST00000625377 1910 ntTSL 5 BASIC19.67■□□□□ 0.74
TRAF7Q6Q0C0 ELOF1-201ENST00000252445 1019 ntAPPRIS P1 TSL 2 BASIC19.67■□□□□ 0.74
TRAF7Q6Q0C0 ROMO1-201ENST00000336695 496 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
TRAF7Q6Q0C0 MSANTD3-201ENST00000374885 786 ntTSL 2 BASIC19.67■□□□□ 0.74
TRAF7Q6Q0C0 TMEM128-202ENST00000382753 1221 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
TRAF7Q6Q0C0 AP001107.6-201ENST00000526655 516 ntTSL 3 BASIC19.67■□□□□ 0.74
TRAF7Q6Q0C0 ECSIT-207ENST00000588998 818 ntTSL 3 BASIC19.67■□□□□ 0.74
TRAF7Q6Q0C0 MTDHP4-201ENST00000600287 670 ntBASIC19.67■□□□□ 0.74
TRAF7Q6Q0C0 SELENOM-210ENST00000611680 689 ntAPPRIS ALT2 TSL 5 BASIC19.67■□□□□ 0.74
TRAF7Q6Q0C0 CAND2-206ENST00000626378 333 ntTSL 5 BASIC19.67■□□□□ 0.74
TRAF7Q6Q0C0 NETO1-207ENST00000583169 2357 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
TRAF7Q6Q0C0 USP48-201ENST00000308271 4595 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
TRAF7Q6Q0C0 FAR2P2-204ENST00000424873 2070 ntTSL 2 BASIC19.67■□□□□ 0.74
TRAF7Q6Q0C0 FAM53A-205ENST00000472884 2086 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
TRAF7Q6Q0C0 ISCU-205ENST00000535729 1330 ntTSL 2 BASIC19.67■□□□□ 0.74
TRAF7Q6Q0C0 TCTA-201ENST00000273590 2146 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
TRAF7Q6Q0C0 FAM214B-203ENST00000378561 5771 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
TRAF7Q6Q0C0 IP6K1-204ENST00000468463 1815 ntTSL 5 BASIC19.67■□□□□ 0.74
TRAF7Q6Q0C0 SDCBP2-201ENST00000339987 1404 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
TRAF7Q6Q0C0 ESR2-212ENST00000556275 2695 ntTSL 2 BASIC19.67■□□□□ 0.74
TRAF7Q6Q0C0 SOX21-201ENST00000376945 2778 ntAPPRIS P1 BASIC19.66■□□□□ 0.74
TRAF7Q6Q0C0 ADCK5-201ENST00000308860 1949 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
TRAF7Q6Q0C0 PROB1-201ENST00000434752 5122 ntAPPRIS P1 BASIC19.66■□□□□ 0.74
TRAF7Q6Q0C0 DMAP1-201ENST00000315913 1552 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
TRAF7Q6Q0C0 TNFSF13-205ENST00000396545 1593 ntAPPRIS ALT1 TSL 1 (best) BASIC19.66■□□□□ 0.74
TRAF7Q6Q0C0 FGFR2-208ENST00000360144 3001 ntTSL 2 BASIC19.66■□□□□ 0.74
TRAF7Q6Q0C0 NSUN2-206ENST00000506139 2619 ntAPPRIS ALT2 TSL 2 BASIC19.66■□□□□ 0.74
TRAF7Q6Q0C0 FAM110A-203ENST00000381939 1737 ntAPPRIS P1 TSL 3 BASIC19.66■□□□□ 0.74
TRAF7Q6Q0C0 MRPL28-201ENST00000199706 1098 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
TRAF7Q6Q0C0 MED15P5-201ENST00000423150 992 ntBASIC19.66■□□□□ 0.74
TRAF7Q6Q0C0 C21orf33-205ENST00000427803 1077 ntTSL 2 BASIC19.66■□□□□ 0.74
TRAF7Q6Q0C0 B4GALT1-AS1-202ENST00000442432 843 ntTSL 2 BASIC19.66■□□□□ 0.74
TRAF7Q6Q0C0 SMIM27-204ENST00000453396 1003 ntAPPRIS ALT2 TSL 3 BASIC19.66■□□□□ 0.74
TRAF7Q6Q0C0 MKNK2-212ENST00000591588 631 ntTSL 2 BASIC19.66■□□□□ 0.74
TRAF7Q6Q0C0 GRTP1-205ENST00000620217 1073 ntTSL 2 BASIC19.66■□□□□ 0.74
TRAF7Q6Q0C0 GDPD1-201ENST00000284116 1821 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
TRAF7Q6Q0C0 ADAMTS19-201ENST00000274487 5234 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
TRAF7Q6Q0C0 CHRNG-201ENST00000389492 1398 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
TRAF7Q6Q0C0 PSMC3IP-204ENST00000587209 1381 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
TRAF7Q6Q0C0 BRSK1-201ENST00000309383 3079 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
TRAF7Q6Q0C0 PLD3-205ENST00000409419 1966 ntAPPRIS P1 TSL 5 BASIC19.66■□□□□ 0.74
TRAF7Q6Q0C0 ST3GAL4-209ENST00000526727 1967 ntAPPRIS ALT1 TSL 1 (best) BASIC19.66■□□□□ 0.74
TRAF7Q6Q0C0 AP002414.3-201ENST00000589352 1468 ntBASIC19.66■□□□□ 0.74
TRAF7Q6Q0C0 CIAO1-203ENST00000488633 1533 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
TRAF7Q6Q0C0 SEMA3D-202ENST00000444867 1605 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
TRAF7Q6Q0C0 GCOM1-202ENST00000380569 1846 ntAPPRIS P3 TSL 2 BASIC19.65■□□□□ 0.74
TRAF7Q6Q0C0 RARRES1-201ENST00000237696 1952 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
TRAF7Q6Q0C0 ZMAT3-203ENST00000432729 2944 ntAPPRIS ALT1 TSL 2 BASIC19.65■□□□□ 0.74
TRAF7Q6Q0C0 MOSPD3-201ENST00000223054 1053 ntAPPRIS P1 TSL 2 BASIC19.65■□□□□ 0.74
TRAF7Q6Q0C0 BRCC3-202ENST00000340647 1101 ntAPPRIS P2 TSL 2 BASIC19.65■□□□□ 0.74
TRAF7Q6Q0C0 FAM220CP-201ENST00000395253 831 ntBASIC19.65■□□□□ 0.74
TRAF7Q6Q0C0 RMDN1-202ENST00000430676 1106 ntTSL 2 BASIC19.65■□□□□ 0.74
TRAF7Q6Q0C0 AC007967.3-201ENST00000434308 558 ntBASIC19.65■□□□□ 0.74
TRAF7Q6Q0C0 AC234772.2-201ENST00000456532 375 ntTSL 3 BASIC19.65■□□□□ 0.74
TRAF7Q6Q0C0 TCTN1-223ENST00000550703 2149 ntTSL 2 BASIC19.65■□□□□ 0.74
TRAF7Q6Q0C0 AC025162.1-201ENST00000554022 565 ntTSL 4 BASIC19.65■□□□□ 0.74
TRAF7Q6Q0C0 BCR-202ENST00000359540 4708 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
TRAF7Q6Q0C0 C1orf198-201ENST00000366663 3858 ntAPPRIS P3 TSL 1 (best) BASIC19.65■□□□□ 0.74
TRAF7Q6Q0C0 DUS1L-202ENST00000354321 2151 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
TRAF7Q6Q0C0 MTMR12-203ENST00000382142 5187 ntAPPRIS P3 TSL 1 (best) BASIC19.65■□□□□ 0.74
TRAF7Q6Q0C0 KIF25-AS1-201ENST00000414364 1420 ntTSL 2 BASIC19.65■□□□□ 0.74
TRAF7Q6Q0C0 TSPAN17-202ENST00000310032 2550 ntTSL 5 BASIC19.65■□□□□ 0.74
TRAF7Q6Q0C0 HPDL-201ENST00000334815 1629 ntAPPRIS P1 BASIC19.65■□□□□ 0.74
TRAF7Q6Q0C0 SMARCD3-202ENST00000356800 1669 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
TRAF7Q6Q0C0 SDK1-202ENST00000404826 10397 ntAPPRIS P2 TSL 1 (best) BASIC19.65■□□□□ 0.74
TRAF7Q6Q0C0 REEP2-201ENST00000254901 2099 ntAPPRIS P3 TSL 1 (best) BASIC19.64■□□□□ 0.74
TRAF7Q6Q0C0 IL17RC-215ENST00000455057 2244 ntAPPRIS ALT2 TSL 1 (best) BASIC19.64■□□□□ 0.74
TRAF7Q6Q0C0 MFSD1-219ENST00000622669 2361 ntTSL 1 (best) BASIC19.64■□□□□ 0.74
TRAF7Q6Q0C0 DGKZ-203ENST00000421244 2862 ntAPPRIS ALT2 TSL 1 (best) BASIC19.64■□□□□ 0.73
TRAF7Q6Q0C0 DMKN-206ENST00000418261 1257 ntAPPRIS ALT2 TSL 1 (best) BASIC19.64■□□□□ 0.73
TRAF7Q6Q0C0 AC012363.1-201ENST00000455707 575 ntTSL 4 BASIC19.64■□□□□ 0.73
TRAF7Q6Q0C0 FAM172A-207ENST00000509739 1031 ntTSL 2 BASIC19.64■□□□□ 0.73
TRAF7Q6Q0C0 FLJ20021-201ENST00000527564 790 ntTSL 2 BASIC19.64■□□□□ 0.73
TRAF7Q6Q0C0 UNC93B6-202ENST00000528242 690 ntBASIC19.64■□□□□ 0.73
TRAF7Q6Q0C0 AC105339.3-201ENST00000560043 636 ntBASIC19.64■□□□□ 0.73
TRAF7Q6Q0C0 AP005233.2-201ENST00000561588 372 ntTSL 3 BASIC19.64■□□□□ 0.73
TRAF7Q6Q0C0 AC097374.2-201ENST00000618617 1306 ntBASIC19.64■□□□□ 0.73
TRAF7Q6Q0C0 DBNDD2-204ENST00000372712 1537 ntAPPRIS P1 TSL 5 BASIC19.64■□□□□ 0.73
TRAF7Q6Q0C0 MRPL10-203ENST00000414011 1622 ntTSL 3 BASIC19.64■□□□□ 0.73
TRAF7Q6Q0C0 GFI1B-208ENST00000636263 1604 ntTSL 5 BASIC19.64■□□□□ 0.73
TRAF7Q6Q0C0 COA5-201ENST00000328709 1754 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Retrieved 100 of 98,524 protein–RNA pairs in 23.2 ms