Protein–RNA interactions for Protein: Q6PCD5

RFWD3, E3 ubiquitin-protein ligase RFWD3, humanhuman

Predictions only

Length 774 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFWD3Q6PCD5 NMRK1-203ENST00000376811 2050 ntTSL 2 BASIC18.89■□□□□ 0.61
RFWD3Q6PCD5 BAIAP2-203ENST00000416299 1442 ntTSL 2 BASIC18.89■□□□□ 0.61
RFWD3Q6PCD5 RNPS1-202ENST00000320225 2241 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
RFWD3Q6PCD5 INPP5J-205ENST00000404390 2215 ntAPPRIS P3 TSL 2 BASIC18.89■□□□□ 0.61
RFWD3Q6PCD5 CAMK2B-203ENST00000347193 1577 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
RFWD3Q6PCD5 GAREM2-201ENST00000401533 4161 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
RFWD3Q6PCD5 TIMM8A-201ENST00000372902 1664 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
RFWD3Q6PCD5 AJUBA-202ENST00000361265 2569 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
RFWD3Q6PCD5 EPB41L2-211ENST00000525271 2568 ntTSL 2 BASIC18.88■□□□□ 0.61
RFWD3Q6PCD5 TRIM63-201ENST00000374272 1770 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
RFWD3Q6PCD5 PCSK5-202ENST00000376767 2845 ntTSL 2 BASIC18.88■□□□□ 0.61
RFWD3Q6PCD5 GLIS1-202ENST00000628545 2807 ntAPPRIS ALT2 TSL 5 BASIC18.88■□□□□ 0.61
RFWD3Q6PCD5 VOPP1-201ENST00000285279 2962 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
RFWD3Q6PCD5 HOXA9-201ENST00000343483 2060 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
RFWD3Q6PCD5 BANP-202ENST00000355022 2164 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
RFWD3Q6PCD5 LHX8-201ENST00000294638 2373 ntAPPRIS P3 TSL 1 (best) BASIC18.88■□□□□ 0.61
RFWD3Q6PCD5 TADA3-201ENST00000301964 2355 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
RFWD3Q6PCD5 DCBLD2-201ENST00000326840 6122 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
RFWD3Q6PCD5 HIST1H2AI-201ENST00000358739 503 ntAPPRIS P1 BASIC18.88■□□□□ 0.61
RFWD3Q6PCD5 UFSP1-201ENST00000388761 996 ntAPPRIS P1 BASIC18.88■□□□□ 0.61
RFWD3Q6PCD5 AC079031.1-201ENST00000542627 1035 ntTSL 3 BASIC18.88■□□□□ 0.61
RFWD3Q6PCD5 AC009084.1-201ENST00000566869 317 ntTSL 5 BASIC18.88■□□□□ 0.61
RFWD3Q6PCD5 AC004771.4-201ENST00000576752 474 ntTSL 5 BASIC18.88■□□□□ 0.61
RFWD3Q6PCD5 AL121672.3-201ENST00000608644 468 ntBASIC18.88■□□□□ 0.61
RFWD3Q6PCD5 Metazoa_SRP.33-201ENST00000613468 285 ntBASIC18.88■□□□□ 0.61
RFWD3Q6PCD5 KCNE1B-204ENST00000623803 811 ntAPPRIS P2 TSL 1 (best) BASIC18.88■□□□□ 0.61
RFWD3Q6PCD5 CLN3-259ENST00000637551 1083 ntTSL 5 BASIC18.88■□□□□ 0.61
RFWD3Q6PCD5 EHMT1-204ENST00000462484 2707 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
RFWD3Q6PCD5 AGPAT2-205ENST00000538402 1357 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
RFWD3Q6PCD5 KCNQ2-205ENST00000360480 2775 ntAPPRIS ALT2 TSL 5 BASIC18.88■□□□□ 0.61
RFWD3Q6PCD5 PDIA2-202ENST00000404312 1575 ntAPPRIS ALT2 TSL 5 BASIC18.88■□□□□ 0.61
RFWD3Q6PCD5 SIGLEC10-204ENST00000436984 1776 ntTSL 2 BASIC18.88■□□□□ 0.61
RFWD3Q6PCD5 PAX1-205ENST00000613128 5352 ntAPPRIS ALT2 TSL 1 (best) BASIC18.88■□□□□ 0.61
RFWD3Q6PCD5 IRAK3-202ENST00000457197 1853 ntTSL 2 BASIC18.88■□□□□ 0.61
RFWD3Q6PCD5 AMDHD2-203ENST00000413459 2049 ntTSL 2 BASIC18.88■□□□□ 0.61
RFWD3Q6PCD5 USP39-201ENST00000323701 2177 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
RFWD3Q6PCD5 NOMO2-201ENST00000330537 4352 ntAPPRIS ALT2 TSL 5 BASIC18.88■□□□□ 0.61
RFWD3Q6PCD5 PCOLCE-AS1-201ENST00000442166 2537 ntTSL 2 BASIC18.88■□□□□ 0.61
RFWD3Q6PCD5 SCARB1-203ENST00000415380 2731 ntTSL 2 BASIC18.87■□□□□ 0.61
RFWD3Q6PCD5 ZNF74-201ENST00000357502 2788 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
RFWD3Q6PCD5 PCSK7-201ENST00000320934 4649 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
RFWD3Q6PCD5 RPL3-201ENST00000216146 1442 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
RFWD3Q6PCD5 NDUFAF2-201ENST00000296597 719 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
RFWD3Q6PCD5 SLC12A4-201ENST00000316341 4765 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
RFWD3Q6PCD5 PHF12-202ENST00000332830 4759 ntAPPRIS P1 TSL 2 BASIC18.87■□□□□ 0.61
RFWD3Q6PCD5 PDZD3-202ENST00000355547 2252 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
RFWD3Q6PCD5 RPRD1A-201ENST00000357384 1850 ntAPPRIS P1 TSL 5 BASIC18.87■□□□□ 0.61
RFWD3Q6PCD5 LINC00311-201ENST00000366314 1566 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
RFWD3Q6PCD5 CD55-206ENST00000391921 2433 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
RFWD3Q6PCD5 VKORC1-205ENST00000394975 1012 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
RFWD3Q6PCD5 SLC29A4-202ENST00000396872 5685 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
RFWD3Q6PCD5 AP000347.1-209ENST00000437294 557 ntTSL 4 BASIC18.87■□□□□ 0.61
RFWD3Q6PCD5 HAUS8-202ENST00000448593 1545 ntAPPRIS ALT2 TSL 5 BASIC18.87■□□□□ 0.61
RFWD3Q6PCD5 TSSC2-201ENST00000450217 709 ntBASIC18.87■□□□□ 0.61
RFWD3Q6PCD5 AC106791.1-202ENST00000508281 1148 ntTSL 2 BASIC18.87■□□□□ 0.61
RFWD3Q6PCD5 KRT8P26-201ENST00000534154 1276 ntBASIC18.87■□□□□ 0.61
RFWD3Q6PCD5 MCTP2-205ENST00000543482 1422 ntTSL 2 BASIC18.87■□□□□ 0.61
RFWD3Q6PCD5 LINC01582-202ENST00000561215 452 ntTSL 4 BASIC18.87■□□□□ 0.61
RFWD3Q6PCD5 LIMD2-211ENST00000583211 1298 ntTSL 3 BASIC18.87■□□□□ 0.61
RFWD3Q6PCD5 AC027097.1-202ENST00000592201 1954 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
RFWD3Q6PCD5 RAB4B-EGLN2-201ENST00000594136 2554 ntAPPRIS P1 TSL 2 BASIC18.87■□□□□ 0.61
RFWD3Q6PCD5 AC010463.1-201ENST00000596542 1207 ntAPPRIS P1 TSL 2 BASIC18.87■□□□□ 0.61
RFWD3Q6PCD5 TXNDC12-205ENST00000610127 806 ntTSL 2 BASIC18.87■□□□□ 0.61
RFWD3Q6PCD5 AKR1A1-214ENST00000621846 1360 ntAPPRIS P1 TSL 5 BASIC18.87■□□□□ 0.61
RFWD3Q6PCD5 VEGFA-206ENST00000372077 2834 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
RFWD3Q6PCD5 VHL-202ENST00000345392 2696 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
RFWD3Q6PCD5 ATRIP-202ENST00000346691 2509 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
RFWD3Q6PCD5 ANKS3-230ENST00000614075 2387 ntAPPRIS P1 TSL 5 BASIC18.86■□□□□ 0.61
RFWD3Q6PCD5 MAP3K6-207ENST00000493901 4309 ntAPPRIS P1 TSL 5 BASIC18.86■□□□□ 0.61
RFWD3Q6PCD5 FAM53A-205ENST00000472884 2086 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
RFWD3Q6PCD5 ROCK2-202ENST00000315872 8292 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
RFWD3Q6PCD5 NFATC4-228ENST00000556759 2025 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
RFWD3Q6PCD5 ZGPAT-202ENST00000355969 1871 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
RFWD3Q6PCD5 PSTPIP1-203ENST00000558012 1896 ntAPPRIS P2 TSL 1 (best) BASIC18.86■□□□□ 0.61
RFWD3Q6PCD5 AL024508.2-201ENST00000607749 1894 ntBASIC18.86■□□□□ 0.61
RFWD3Q6PCD5 GTF2H4-201ENST00000259895 1735 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
RFWD3Q6PCD5 KRT13-201ENST00000246635 1699 ntAPPRIS P4 TSL 1 (best) BASIC18.86■□□□□ 0.61
RFWD3Q6PCD5 PRELID3A-203ENST00000587735 1694 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
RFWD3Q6PCD5 CCDC74B-202ENST00000392984 1353 ntAPPRIS ALT2 TSL 5 BASIC18.86■□□□□ 0.61
RFWD3Q6PCD5 ADPGK-AS1-201ENST00000563592 2730 ntTSL 2 BASIC18.86■□□□□ 0.61
RFWD3Q6PCD5 RABAC1-201ENST00000222008 821 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
RFWD3Q6PCD5 IGHGP-201ENST00000390555 1178 ntBASIC18.86■□□□□ 0.61
RFWD3Q6PCD5 HCG4P8-203ENST00000443049 980 ntBASIC18.86■□□□□ 0.61
RFWD3Q6PCD5 LAMTOR4-205ENST00000468582 621 ntTSL 2 BASIC18.86■□□□□ 0.61
RFWD3Q6PCD5 PHB2-207ENST00000542912 1138 ntTSL 5 BASIC18.86■□□□□ 0.61
RFWD3Q6PCD5 H3F3B-206ENST00000587560 551 ntAPPRIS P1 TSL 2 BASIC18.86■□□□□ 0.61
RFWD3Q6PCD5 RABAC1-208ENST00000601078 728 ntTSL 3 BASIC18.86■□□□□ 0.61
RFWD3Q6PCD5 AL390719.2-201ENST00000606993 987 ntBASIC18.86■□□□□ 0.61
RFWD3Q6PCD5 AC092119.3-201ENST00000612618 583 ntBASIC18.86■□□□□ 0.61
RFWD3Q6PCD5 CCNI2-201ENST00000378731 2355 ntAPPRIS P3 TSL 1 (best) BASIC18.86■□□□□ 0.61
RFWD3Q6PCD5 ADRA1A-201ENST00000276393 2281 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
RFWD3Q6PCD5 PGM5-202ENST00000396396 3338 ntAPPRIS P1 TSL 2 BASIC18.86■□□□□ 0.61
RFWD3Q6PCD5 GRIN3B-201ENST00000234389 3281 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
RFWD3Q6PCD5 NCOA6-207ENST00000616167 3271 ntAPPRIS ALT2 TSL 5 BASIC18.86■□□□□ 0.61
RFWD3Q6PCD5 UPF1-201ENST00000262803 5348 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
RFWD3Q6PCD5 XYLT2-203ENST00000507602 2107 ntTSL 2 BASIC18.86■□□□□ 0.61
RFWD3Q6PCD5 ADCY5-202ENST00000462833 7311 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
RFWD3Q6PCD5 HMGA1-201ENST00000311487 1920 ntAPPRIS P4 TSL 1 (best) BASIC18.86■□□□□ 0.61
RFWD3Q6PCD5 SIL1-202ENST00000394817 1923 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
RFWD3Q6PCD5 PPP2R2C-209ENST00000515571 1832 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
Retrieved 100 of 98,524 protein–RNA pairs in 36.7 ms