Protein–RNA interactions for Protein: Q5SXM2

SNAPC4, snRNA-activating protein complex subunit 4, humanhuman

Predictions only

Length 1,469 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNAPC4Q5SXM2 EEF1A1-203ENST00000331523 1923 ntAPPRIS P1 TSL 5 BASIC29.44■■■□□ 2.3
SNAPC4Q5SXM2 COLEC11-206ENST00000403096 1557 ntTSL 1 (best) BASIC29.44■■■□□ 2.3
SNAPC4Q5SXM2 LPAR1-201ENST00000358883 2687 ntAPPRIS P2 TSL 2 BASIC29.44■■■□□ 2.3
SNAPC4Q5SXM2 MOGS-202ENST00000409065 2668 ntTSL 5 BASIC29.44■■■□□ 2.3
SNAPC4Q5SXM2 IRAK3-202ENST00000457197 1853 ntTSL 2 BASIC29.44■■■□□ 2.3
SNAPC4Q5SXM2 P3H4-202ENST00000393928 2601 ntAPPRIS P2 TSL 1 (best) BASIC29.44■■■□□ 2.3
SNAPC4Q5SXM2 ESR2-204ENST00000353772 2454 ntTSL 1 (best) BASIC29.43■■■□□ 2.3
SNAPC4Q5SXM2 RIPK2-201ENST00000220751 2584 ntAPPRIS P1 TSL 1 (best) BASIC29.43■■■□□ 2.3
SNAPC4Q5SXM2 PPIB-201ENST00000300026 1081 ntAPPRIS P1 TSL 1 (best) BASIC29.43■■■□□ 2.3
SNAPC4Q5SXM2 AP4S1-202ENST00000313566 839 ntTSL 3 BASIC29.43■■■□□ 2.3
SNAPC4Q5SXM2 COPE-202ENST00000349893 948 ntTSL 2 BASIC29.43■■■□□ 2.3
SNAPC4Q5SXM2 HDAC11-202ENST00000402259 1000 ntTSL 3 BASIC29.43■■■□□ 2.3
SNAPC4Q5SXM2 TREML1-203ENST00000437044 647 ntTSL 1 (best) BASIC29.43■■■□□ 2.3
SNAPC4Q5SXM2 AC055854.1-201ENST00000523627 570 ntTSL 4 BASIC29.43■■■□□ 2.3
SNAPC4Q5SXM2 ARMC7-204ENST00000582136 1204 ntTSL 2 BASIC29.43■■■□□ 2.3
SNAPC4Q5SXM2 AL390955.2-201ENST00000603032 514 ntBASIC29.43■■■□□ 2.3
SNAPC4Q5SXM2 AC004790.2-201ENST00000623588 572 ntBASIC29.43■■■□□ 2.3
SNAPC4Q5SXM2 AL035252.4-201ENST00000624174 288 ntBASIC29.43■■■□□ 2.3
SNAPC4Q5SXM2 PRKG2-207ENST00000628926 2623 ntTSL 2 BASIC29.43■■■□□ 2.3
SNAPC4Q5SXM2 OTOP3-201ENST00000328801 2363 ntAPPRIS P1 TSL 2 BASIC29.43■■■□□ 2.3
SNAPC4Q5SXM2 GPR3-201ENST00000374024 2115 ntAPPRIS P1 TSL 1 (best) BASIC29.43■■■□□ 2.3
SNAPC4Q5SXM2 GGN-201ENST00000334928 2239 ntAPPRIS P1 TSL 1 (best) BASIC29.43■■■□□ 2.3
SNAPC4Q5SXM2 CLK3-202ENST00000395066 2621 ntTSL 1 (best) BASIC29.43■■■□□ 2.3
SNAPC4Q5SXM2 H2AFY-217ENST00000511689 2789 ntAPPRIS P4 TSL 1 (best) BASIC29.43■■■□□ 2.3
SNAPC4Q5SXM2 GPR31-201ENST00000366834 2059 ntAPPRIS P1 BASIC29.43■■■□□ 2.3
SNAPC4Q5SXM2 RBFOX1-222ENST00000585867 1580 ntTSL 2 BASIC29.42■■■□□ 2.3
SNAPC4Q5SXM2 PNCK-203ENST00000370145 1455 ntTSL 2 BASIC29.42■■■□□ 2.3
SNAPC4Q5SXM2 NMRK2-201ENST00000168977 1126 ntAPPRIS P3 TSL 2 BASIC29.42■■■□□ 2.3
SNAPC4Q5SXM2 IFT20-202ENST00000357896 974 ntTSL 1 (best) BASIC29.42■■■□□ 2.3
SNAPC4Q5SXM2 PIK3CD-AS2-201ENST00000415330 939 ntTSL 5 BASIC29.42■■■□□ 2.3
SNAPC4Q5SXM2 AC109322.1-201ENST00000524499 1264 ntBASIC29.42■■■□□ 2.3
SNAPC4Q5SXM2 MIR4745-201ENST00000577608 62 ntBASIC29.42■■■□□ 2.3
SNAPC4Q5SXM2 NMRK2-205ENST00000616156 1139 ntAPPRIS ALT2 TSL 5 BASIC29.42■■■□□ 2.3
SNAPC4Q5SXM2 AC091812.2-201ENST00000619081 385 ntBASIC29.42■■■□□ 2.3
SNAPC4Q5SXM2 LINC01666-201ENST00000623794 845 ntTSL 5 BASIC29.42■■■□□ 2.3
SNAPC4Q5SXM2 AL359644.1-202ENST00000637541 571 ntTSL 3 BASIC29.42■■■□□ 2.3
SNAPC4Q5SXM2 TMEM82-201ENST00000375782 1520 ntAPPRIS P1 TSL 1 (best) BASIC29.42■■■□□ 2.3
SNAPC4Q5SXM2 SCRT2-201ENST00000246104 3577 ntAPPRIS P1 TSL 1 (best) BASIC29.42■■■□□ 2.3
SNAPC4Q5SXM2 CHEK2-202ENST00000348295 1771 ntTSL 5 BASIC29.42■■■□□ 2.3
SNAPC4Q5SXM2 CPZ-201ENST00000315782 2136 ntAPPRIS P3 TSL 1 (best) BASIC29.42■■■□□ 2.3
SNAPC4Q5SXM2 FOXG1-201ENST00000313071 4890 ntAPPRIS P1 BASIC29.42■■■□□ 2.3
SNAPC4Q5SXM2 ARRB2-203ENST00000381488 1236 ntTSL 2 BASIC29.42■■■□□ 2.3
SNAPC4Q5SXM2 TAF8-206ENST00000472818 719 ntTSL 2 BASIC29.42■■■□□ 2.3
SNAPC4Q5SXM2 GIPC1-213ENST00000591349 1068 ntTSL 2 BASIC29.42■■■□□ 2.3
SNAPC4Q5SXM2 RSPO1-201ENST00000356545 2621 ntAPPRIS P1 TSL 1 (best) BASIC29.42■■■□□ 2.3
SNAPC4Q5SXM2 CORO1A-216ENST00000570045 1622 ntAPPRIS P1 TSL 1 (best) BASIC29.41■■■□□ 2.3
SNAPC4Q5SXM2 SEC61A2-201ENST00000298428 1893 ntAPPRIS P1 TSL 1 (best) BASIC29.41■■■□□ 2.3
SNAPC4Q5SXM2 PC-214ENST00000628663 1470 ntTSL 5 BASIC29.41■■■□□ 2.3
SNAPC4Q5SXM2 NPNT-204ENST00000453617 2419 ntAPPRIS ALT1 TSL 2 BASIC29.41■■■□□ 2.3
SNAPC4Q5SXM2 RTKN-201ENST00000233330 2220 ntTSL 1 (best) BASIC29.41■■■□□ 2.3
SNAPC4Q5SXM2 COLEC11-202ENST00000349077 1259 ntAPPRIS P1 TSL 1 (best) BASIC29.41■■■□□ 2.3
SNAPC4Q5SXM2 PSMA7-201ENST00000370858 925 ntTSL 2 BASIC29.41■■■□□ 2.3
SNAPC4Q5SXM2 LINC01264-201ENST00000431395 500 ntTSL 3 BASIC29.41■■■□□ 2.3
SNAPC4Q5SXM2 FAM153C-206ENST00000507848 1071 ntAPPRIS ALT2 TSL 2 BASIC29.41■■■□□ 2.3
SNAPC4Q5SXM2 INO80C-206ENST00000586489 594 ntTSL 3 BASIC29.41■■■□□ 2.3
SNAPC4Q5SXM2 NPAS4-204ENST00000639555 878 ntTSL 5 BASIC29.41■■■□□ 2.3
SNAPC4Q5SXM2 TMEM106C-202ENST00000429772 1515 ntAPPRIS P1 TSL 2 BASIC29.41■■■□□ 2.3
SNAPC4Q5SXM2 CHMP6-201ENST00000325167 1664 ntAPPRIS P1 TSL 1 (best) BASIC29.41■■■□□ 2.3
SNAPC4Q5SXM2 USP48-205ENST00000421625 2818 ntTSL 2 BASIC29.4■■■□□ 2.3
SNAPC4Q5SXM2 KLC1-219ENST00000555836 2467 ntTSL 5 BASIC29.4■■■□□ 2.3
SNAPC4Q5SXM2 ZIM2-206ENST00000599935 2226 ntAPPRIS P1 TSL 5 BASIC29.4■■■□□ 2.3
SNAPC4Q5SXM2 DNAJC28-204ENST00000617313 2237 ntAPPRIS P1 TSL 5 BASIC29.4■■■□□ 2.3
SNAPC4Q5SXM2 CEBPA-201ENST00000498907 2631 ntAPPRIS P1 BASIC29.4■■■□□ 2.3
SNAPC4Q5SXM2 IRX4-208ENST00000622814 2398 ntTSL 1 (best) BASIC29.4■■■□□ 2.3
SNAPC4Q5SXM2 HLA-A-203ENST00000376809 1611 ntAPPRIS P1 BASIC29.4■■■□□ 2.3
SNAPC4Q5SXM2 GNS-207ENST00000542058 2020 ntAPPRIS ALT2 TSL 2 BASIC29.4■■■□□ 2.3
SNAPC4Q5SXM2 KRT8P47-201ENST00000604727 1398 ntBASIC29.4■■■□□ 2.3
SNAPC4Q5SXM2 DUT-202ENST00000455976 1935 ntAPPRIS P1 TSL 1 (best) BASIC29.4■■■□□ 2.3
SNAPC4Q5SXM2 SGO2-202ENST00000409203 1041 ntAPPRIS ALT2 TSL 1 (best) BASIC29.4■■■□□ 2.3
SNAPC4Q5SXM2 AC096633.1-201ENST00000422446 749 ntBASIC29.4■■■□□ 2.3
SNAPC4Q5SXM2 AL022316.1-201ENST00000428765 572 ntTSL 4 BASIC29.4■■■□□ 2.3
SNAPC4Q5SXM2 AP000695.1-201ENST00000429588 893 ntTSL 3 BASIC29.4■■■□□ 2.3
SNAPC4Q5SXM2 AC116612.1-201ENST00000557144 562 ntTSL 3 BASIC29.4■■■□□ 2.3
SNAPC4Q5SXM2 AC073592.5-201ENST00000624854 528 ntBASIC29.4■■■□□ 2.3
SNAPC4Q5SXM2 RASL12-201ENST00000220062 2640 ntAPPRIS P1 TSL 1 (best) BASIC29.4■■■□□ 2.3
SNAPC4Q5SXM2 NHLRC1-201ENST00000340650 2248 ntAPPRIS P1 BASIC29.4■■■□□ 2.3
SNAPC4Q5SXM2 FAM193B-217ENST00000514747 2913 ntAPPRIS P1 TSL 5 BASIC29.4■■■□□ 2.3
SNAPC4Q5SXM2 HGH1-201ENST00000347708 2531 ntAPPRIS P1 TSL 1 (best) BASIC29.4■■■□□ 2.3
SNAPC4Q5SXM2 AZU1-202ENST00000592205 1713 ntTSL 2 BASIC29.4■■■□□ 2.3
SNAPC4Q5SXM2 SMIM4-203ENST00000477703 1770 ntAPPRIS P1 TSL 1 (best) BASIC29.39■■■□□ 2.3
SNAPC4Q5SXM2 RNF135-205ENST00000535306 2098 ntTSL 1 (best) BASIC29.39■■■□□ 2.3
SNAPC4Q5SXM2 C2orf81-201ENST00000290390 2227 ntAPPRIS P5 TSL 5 BASIC29.39■■■□□ 2.3
SNAPC4Q5SXM2 HCK-207ENST00000520553 2101 ntAPPRIS ALT2 TSL 1 (best) BASIC29.39■■■□□ 2.3
SNAPC4Q5SXM2 ZNF582-207ENST00000619584 2297 ntAPPRIS P1 TSL 1 (best) BASIC29.39■■■□□ 2.3
SNAPC4Q5SXM2 SIGLEC8-202ENST00000340550 1293 ntTSL 1 (best) BASIC29.39■■■□□ 2.3
SNAPC4Q5SXM2 CLDND1-203ENST00000394181 2170 ntTSL 1 (best) BASIC29.39■■■□□ 2.3
SNAPC4Q5SXM2 AC004461.1-201ENST00000412461 403 ntBASIC29.39■■■□□ 2.3
SNAPC4Q5SXM2 NCF1C-201ENST00000438382 1427 ntBASIC29.39■■■□□ 2.3
SNAPC4Q5SXM2 CD63-210ENST00000550776 870 ntTSL 5 BASIC29.39■■■□□ 2.3
SNAPC4Q5SXM2 AC004877.2-201ENST00000623941 599 ntBASIC29.39■■■□□ 2.3
SNAPC4Q5SXM2 AF228730.6-201ENST00000641497 218 ntBASIC29.39■■■□□ 2.3
SNAPC4Q5SXM2 AC084121.3-201ENST00000641716 218 ntBASIC29.39■■■□□ 2.3
SNAPC4Q5SXM2 AC105233.6-201ENST00000642093 218 ntBASIC29.39■■■□□ 2.3
SNAPC4Q5SXM2 MTFR1L-202ENST00000374301 2099 ntAPPRIS P1 TSL 1 (best) BASIC29.39■■■□□ 2.3
SNAPC4Q5SXM2 HSPB9-201ENST00000565659 1922 ntAPPRIS P1 BASIC29.39■■■□□ 2.3
SNAPC4Q5SXM2 PTN-201ENST00000348225 1614 ntAPPRIS P1 TSL 1 (best) BASIC29.39■■■□□ 2.3
SNAPC4Q5SXM2 OPCML-202ENST00000374778 1302 ntTSL 1 (best) BASIC29.39■■■□□ 2.29
SNAPC4Q5SXM2 CD72-201ENST00000259633 1548 ntAPPRIS P2 TSL 1 (best) BASIC29.39■■■□□ 2.29
SNAPC4Q5SXM2 CACNB3-202ENST00000536187 1872 ntTSL 2 BASIC29.38■■■□□ 2.29
SNAPC4Q5SXM2 TRIM61-201ENST00000329314 1582 ntAPPRIS P1 TSL 1 (best) BASIC29.38■■■□□ 2.29
Retrieved 100 of 98,524 protein–RNA pairs in 27.5 ms