Protein–RNA interactions for Protein: Q4JDL3

PTPN20, Tyrosine-protein phosphatase non-receptor type 20, humanhuman

Predictions only

Length 420 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN20Q4JDL3 MATN4-205ENST00000537548 1991 ntAPPRIS ALT2 TSL 5 BASIC19.08■□□□□ 0.64
PTPN20Q4JDL3 CBX1-201ENST00000225603 2232 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
PTPN20Q4JDL3 ARHGEF2-204ENST00000368315 1645 ntTSL 5 BASIC19.07■□□□□ 0.64
PTPN20Q4JDL3 NEU4-203ENST00000404257 2352 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
PTPN20Q4JDL3 RALGPS1-208ENST00000424082 2362 ntTSL 2 BASIC19.07■□□□□ 0.64
PTPN20Q4JDL3 PHF12-202ENST00000332830 4759 ntAPPRIS P1 TSL 2 BASIC19.07■□□□□ 0.64
PTPN20Q4JDL3 SDC2-202ENST00000518385 1583 ntTSL 5 BASIC19.07■□□□□ 0.64
PTPN20Q4JDL3 SLC25A43-201ENST00000217909 2783 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
PTPN20Q4JDL3 TRIM36-202ENST00000379617 1322 ntTSL 2 BASIC19.07■□□□□ 0.64
PTPN20Q4JDL3 VPS37D-202ENST00000451519 1303 ntTSL 5 BASIC19.07■□□□□ 0.64
PTPN20Q4JDL3 PPT2-247ENST00000375143 1754 ntAPPRIS ALT2 TSL 5 BASIC19.07■□□□□ 0.64
PTPN20Q4JDL3 MARVELD3-202ENST00000299952 2214 ntAPPRIS ALT2 TSL 2 BASIC19.07■□□□□ 0.64
PTPN20Q4JDL3 PEX14-201ENST00000356607 1985 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
PTPN20Q4JDL3 IGLL1-201ENST00000249053 716 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
PTPN20Q4JDL3 IGHGP-201ENST00000390555 1178 ntBASIC19.07■□□□□ 0.64
PTPN20Q4JDL3 DUTP2-201ENST00000519164 463 ntBASIC19.07■□□□□ 0.64
PTPN20Q4JDL3 AP005717.1-202ENST00000523563 419 ntTSL 3 BASIC19.07■□□□□ 0.64
PTPN20Q4JDL3 ZNF444P1-201ENST00000559497 298 ntBASIC19.07■□□□□ 0.64
PTPN20Q4JDL3 NME3-204ENST00000563498 920 ntTSL 2 BASIC19.07■□□□□ 0.64
PTPN20Q4JDL3 MIR2117HG-201ENST00000588060 506 ntTSL 4 BASIC19.07■□□□□ 0.64
PTPN20Q4JDL3 NTF6B-201ENST00000591913 560 ntBASIC19.07■□□□□ 0.64
PTPN20Q4JDL3 DHRS2-210ENST00000611765 1287 ntAPPRIS ALT2 TSL 2 BASIC19.07■□□□□ 0.64
PTPN20Q4JDL3 PNCK-203ENST00000370145 1455 ntTSL 2 BASIC19.07■□□□□ 0.64
PTPN20Q4JDL3 OLFM1-201ENST00000252854 2591 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
PTPN20Q4JDL3 TAF15-211ENST00000604841 2140 ntAPPRIS ALT2 TSL 1 (best) BASIC19.07■□□□□ 0.64
PTPN20Q4JDL3 FAM72C-201ENST00000369175 1658 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
PTPN20Q4JDL3 HLA-DQB1-201ENST00000374943 1656 ntBASIC19.07■□□□□ 0.64
PTPN20Q4JDL3 FAM72B-207ENST00000619376 1659 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
PTPN20Q4JDL3 TREX2-201ENST00000330912 2262 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
PTPN20Q4JDL3 MRPL10-203ENST00000414011 1622 ntTSL 3 BASIC19.07■□□□□ 0.64
PTPN20Q4JDL3 CRELD2-201ENST00000328268 1357 ntAPPRIS P3 TSL 1 (best) BASIC19.06■□□□□ 0.64
PTPN20Q4JDL3 HOTAIR-201ENST00000424518 2421 ntTSL 5 BASIC19.06■□□□□ 0.64
PTPN20Q4JDL3 LINC00311-201ENST00000366314 1566 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
PTPN20Q4JDL3 ZCCHC24-202ENST00000372336 4933 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
PTPN20Q4JDL3 CCDC157-201ENST00000338306 3001 ntAPPRIS P3 TSL 5 BASIC19.06■□□□□ 0.64
PTPN20Q4JDL3 PRSS23-201ENST00000280258 4015 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
PTPN20Q4JDL3 MYH14-206ENST00000596571 5988 ntAPPRIS ALT2 TSL 5 BASIC19.06■□□□□ 0.64
PTPN20Q4JDL3 CLPB-212ENST00000543042 2133 ntTSL 2 BASIC19.06■□□□□ 0.64
PTPN20Q4JDL3 C19orf25-207ENST00000588871 2128 ntTSL 5 BASIC19.06■□□□□ 0.64
PTPN20Q4JDL3 LARGE2-201ENST00000325468 2522 ntAPPRIS P3 TSL 1 (best) BASIC19.06■□□□□ 0.64
PTPN20Q4JDL3 IGSF9-206ENST00000611023 2663 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
PTPN20Q4JDL3 ZMYND11-214ENST00000509513 2065 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
PTPN20Q4JDL3 TRIM13-206ENST00000457662 1489 ntAPPRIS P3 TSL 1 (best) BASIC19.06■□□□□ 0.64
PTPN20Q4JDL3 ATP6V0C-201ENST00000330398 1175 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
PTPN20Q4JDL3 DDRGK1-202ENST00000380201 1128 ntTSL 2 BASIC19.06■□□□□ 0.64
PTPN20Q4JDL3 SMIM29-206ENST00000476320 1297 ntAPPRIS P1 TSL 2 BASIC19.06■□□□□ 0.64
PTPN20Q4JDL3 AP003733.1-201ENST00000491725 852 ntBASIC19.06■□□□□ 0.64
PTPN20Q4JDL3 MOK-234ENST00000524370 1165 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
PTPN20Q4JDL3 CLN6-204ENST00000564752 900 ntTSL 3 BASIC19.06■□□□□ 0.64
PTPN20Q4JDL3 RNF126P1-202ENST00000569893 925 ntBASIC19.06■□□□□ 0.64
PTPN20Q4JDL3 LIMD2-211ENST00000583211 1298 ntTSL 3 BASIC19.06■□□□□ 0.64
PTPN20Q4JDL3 MALAT1-215ENST00000619449 794 ntTSL 3 BASIC19.06■□□□□ 0.64
PTPN20Q4JDL3 CLN6-214ENST00000636314 442 ntTSL 3 BASIC19.06■□□□□ 0.64
PTPN20Q4JDL3 ACOT7-202ENST00000377842 1813 ntAPPRIS ALT2 TSL 1 (best) BASIC19.06■□□□□ 0.64
PTPN20Q4JDL3 AFG3L1P-203ENST00000418696 2965 ntTSL 2 BASIC19.06■□□□□ 0.64
PTPN20Q4JDL3 SPSB3-201ENST00000301717 1449 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
PTPN20Q4JDL3 FASTK-202ENST00000353841 1402 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
PTPN20Q4JDL3 P2RY6-207ENST00000538328 1425 ntAPPRIS P1 TSL 3 BASIC19.06■□□□□ 0.64
PTPN20Q4JDL3 SLC22A11-202ENST00000377581 1975 ntTSL 5 BASIC19.06■□□□□ 0.64
PTPN20Q4JDL3 AC067852.2-201ENST00000590513 2313 ntBASIC19.06■□□□□ 0.64
PTPN20Q4JDL3 LGI4-201ENST00000310123 2814 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
PTPN20Q4JDL3 NRSN2-202ENST00000382291 2088 ntAPPRIS P1 TSL 2 BASIC19.05■□□□□ 0.64
PTPN20Q4JDL3 ANKRD6-204ENST00000447838 2968 ntAPPRIS P3 TSL 1 (best) BASIC19.05■□□□□ 0.64
PTPN20Q4JDL3 SDC1-203ENST00000403076 1523 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
PTPN20Q4JDL3 SMIM24-201ENST00000215531 1329 ntAPPRIS P2 TSL 1 (best) BASIC19.05■□□□□ 0.64
PTPN20Q4JDL3 ZACN-201ENST00000334586 1335 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
PTPN20Q4JDL3 MAP3K6-207ENST00000493901 4309 ntAPPRIS P1 TSL 5 BASIC19.05■□□□□ 0.64
PTPN20Q4JDL3 HSPA4-205ENST00000617074 2358 ntTSL 5 BASIC19.05■□□□□ 0.64
PTPN20Q4JDL3 KLHL33-202ENST00000636854 2394 ntAPPRIS P1 TSL 5 BASIC19.05■□□□□ 0.64
PTPN20Q4JDL3 SENP6-202ENST00000370010 4644 ntAPPRIS P3 TSL 1 (best) BASIC19.05■□□□□ 0.64
PTPN20Q4JDL3 TBXA2R-204ENST00000589966 1814 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
PTPN20Q4JDL3 ASB13-201ENST00000357700 2699 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
PTPN20Q4JDL3 ACP5-201ENST00000218758 1630 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
PTPN20Q4JDL3 FAM187B-201ENST00000324675 1184 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
PTPN20Q4JDL3 CCDC7-203ENST00000362006 2133 ntAPPRIS P2 TSL 1 (best) BASIC19.05■□□□□ 0.64
PTPN20Q4JDL3 TBPL1-203ENST00000367871 808 ntTSL 2 BASIC19.05■□□□□ 0.64
PTPN20Q4JDL3 AL031133.1-201ENST00000406807 723 ntBASIC19.05■□□□□ 0.64
PTPN20Q4JDL3 FNDC5-205ENST00000496770 837 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
PTPN20Q4JDL3 PPOX-214ENST00000535223 664 ntTSL 3 BASIC19.05■□□□□ 0.64
PTPN20Q4JDL3 VASH1-204ENST00000554743 1096 ntTSL 3 BASIC19.05■□□□□ 0.64
PTPN20Q4JDL3 MOAP1-201ENST00000298894 2441 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
PTPN20Q4JDL3 GATB-213ENST00000515812 1893 ntTSL 5 BASIC19.05■□□□□ 0.64
PTPN20Q4JDL3 EMD-202ENST00000369842 1379 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
PTPN20Q4JDL3 SEMA6D-205ENST00000389425 2318 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
PTPN20Q4JDL3 SF1-203ENST00000377387 2947 ntAPPRIS ALT2 TSL 1 (best) BASIC19.04■□□□□ 0.64
PTPN20Q4JDL3 AC100803.2-201ENST00000562459 1963 ntBASIC19.04■□□□□ 0.64
PTPN20Q4JDL3 PML-211ENST00000564428 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC19.04■□□□□ 0.64
PTPN20Q4JDL3 NSMAF-202ENST00000427130 3371 ntTSL 2 BASIC19.04■□□□□ 0.64
PTPN20Q4JDL3 MED25-212ENST00000618715 1467 ntTSL 5 BASIC19.04■□□□□ 0.64
PTPN20Q4JDL3 AL079301.1-201ENST00000424580 1633 ntTSL 2 BASIC19.04■□□□□ 0.64
PTPN20Q4JDL3 SEL1L-204ENST00000555824 1631 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
PTPN20Q4JDL3 MFGE8-202ENST00000268151 1752 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
PTPN20Q4JDL3 KDELC1-201ENST00000376004 2060 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
PTPN20Q4JDL3 NCOA6-207ENST00000616167 3271 ntAPPRIS ALT2 TSL 5 BASIC19.04■□□□□ 0.64
PTPN20Q4JDL3 RHOV-201ENST00000220507 1705 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
PTPN20Q4JDL3 DNAAF4-202ENST00000348518 1897 ntAPPRIS P1 TSL 5 BASIC19.04■□□□□ 0.64
PTPN20Q4JDL3 UBL5-201ENST00000358666 513 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
PTPN20Q4JDL3 NLE1-201ENST00000360831 1726 ntTSL 5 BASIC19.04■□□□□ 0.64
PTPN20Q4JDL3 SLC27A4-202ENST00000372870 1557 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
PTPN20Q4JDL3 PAX3-208ENST00000409828 1254 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
Retrieved 100 of 98,524 protein–RNA pairs in 24 ms