Protein–RNA interactions for Protein: Q15878

CACNA1E, Voltage-dependent R-type calcium channel subunit alpha-1E, humanhuman

Predictions only

Length 2,313 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1EQ15878 TPD52L1-211ENST00000532429 1022 ntTSL 2 BASIC17.57■□□□□ 0.4
CACNA1EQ15878 ARHGDIA-208ENST00000581876 709 ntTSL 3 BASIC17.57■□□□□ 0.4
CACNA1EQ15878 CROCCP3-203ENST00000589964 255 ntTSL 3 BASIC17.57■□□□□ 0.4
CACNA1EQ15878 SLC26A1-205ENST00000622731 1057 ntTSL 5 BASIC17.57■□□□□ 0.4
CACNA1EQ15878 LRRC36-201ENST00000329956 2395 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
CACNA1EQ15878 FOXP3-206ENST00000557224 1371 ntTSL 2 BASIC17.57■□□□□ 0.4
CACNA1EQ15878 SPOCK3-215ENST00000510741 1963 ntAPPRIS ALT2 TSL 5 BASIC17.57■□□□□ 0.4
CACNA1EQ15878 NEURL4-202ENST00000399464 5200 ntAPPRIS P4 TSL 1 (best) BASIC17.57■□□□□ 0.4
CACNA1EQ15878 KIF25-AS1-201ENST00000414364 1420 ntTSL 2 BASIC17.57■□□□□ 0.4
CACNA1EQ15878 SNCG-201ENST00000348795 684 ntTSL 2 BASIC17.56■□□□□ 0.4
CACNA1EQ15878 IGKV4-1-201ENST00000390243 538 ntAPPRIS P1 BASIC17.56■□□□□ 0.4
CACNA1EQ15878 KLF4P1-201ENST00000412782 1185 ntBASIC17.56■□□□□ 0.4
CACNA1EQ15878 BPHL-208ENST00000434640 1186 ntTSL 5 BASIC17.56■□□□□ 0.4
CACNA1EQ15878 AP006288.1-201ENST00000446065 395 ntBASIC17.56■□□□□ 0.4
CACNA1EQ15878 AC136632.2-201ENST00000512891 861 ntBASIC17.56■□□□□ 0.4
CACNA1EQ15878 ELOF1-204ENST00000587806 1172 ntTSL 2 BASIC17.56■□□□□ 0.4
CACNA1EQ15878 AL022328.2-201ENST00000608016 640 ntTSL 3 BASIC17.56■□□□□ 0.4
CACNA1EQ15878 LCE1E-203ENST00000619588 267 ntAPPRIS ALT2 TSL 5 BASIC17.56■□□□□ 0.4
CACNA1EQ15878 GSDMD-201ENST00000262580 1762 ntAPPRIS P2 TSL 1 (best) BASIC17.56■□□□□ 0.4
CACNA1EQ15878 HLA-A-203ENST00000376809 1611 ntAPPRIS P1 BASIC17.56■□□□□ 0.4
CACNA1EQ15878 AL079301.1-201ENST00000424580 1633 ntTSL 2 BASIC17.56■□□□□ 0.4
CACNA1EQ15878 DHRS4L2-203ENST00000534993 1450 ntTSL 3 BASIC17.56■□□□□ 0.4
CACNA1EQ15878 PDP1-208ENST00000520728 2554 ntAPPRIS P3 TSL 1 (best) BASIC17.56■□□□□ 0.4
CACNA1EQ15878 PRR14-202ENST00000300835 2198 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
CACNA1EQ15878 SMARCD3-202ENST00000356800 1669 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
CACNA1EQ15878 RUVBL2-206ENST00000595090 2009 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
CACNA1EQ15878 CRELD1-206ENST00000452070 1778 ntAPPRIS P1 TSL 2 BASIC17.56■□□□□ 0.4
CACNA1EQ15878 HOXB9-201ENST00000311177 2581 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
CACNA1EQ15878 RCCD1-201ENST00000394258 2689 ntAPPRIS P2 TSL 1 (best) BASIC17.56■□□□□ 0.4
CACNA1EQ15878 PAX4-204ENST00000463946 1613 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
CACNA1EQ15878 NXPH2-201ENST00000272641 1052 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
CACNA1EQ15878 LCE1B-201ENST00000360090 1139 ntAPPRIS P1 BASIC17.56■□□□□ 0.4
CACNA1EQ15878 MRPL55-208ENST00000366734 990 ntAPPRIS P1 TSL 2 BASIC17.56■□□□□ 0.4
CACNA1EQ15878 MRPL55-217ENST00000366746 565 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
CACNA1EQ15878 LBH-203ENST00000404397 543 ntTSL 4 BASIC17.56■□□□□ 0.4
CACNA1EQ15878 GNB2-207ENST00000427895 1146 ntTSL 5 BASIC17.56■□□□□ 0.4
CACNA1EQ15878 USP30-AS1-201ENST00000478808 656 ntTSL 2 BASIC17.56■□□□□ 0.4
CACNA1EQ15878 AC108751.1-201ENST00000490852 363 ntBASIC17.56■□□□□ 0.4
CACNA1EQ15878 LINGO1-AS2-201ENST00000557799 663 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
CACNA1EQ15878 AC126696.3-201ENST00000563993 575 ntTSL 4 BASIC17.56■□□□□ 0.4
CACNA1EQ15878 AC006557.2-201ENST00000592985 1240 ntBASIC17.56■□□□□ 0.4
CACNA1EQ15878 AC010522.1-205ENST00000598031 606 ntAPPRIS P1 TSL 3 BASIC17.56■□□□□ 0.4
CACNA1EQ15878 MTDHP5-201ENST00000598980 586 ntBASIC17.56■□□□□ 0.4
CACNA1EQ15878 AC073592.4-201ENST00000623827 446 ntBASIC17.56■□□□□ 0.4
CACNA1EQ15878 DPP10-203ENST00000393147 2758 ntAPPRIS ALT2 TSL 1 (best) BASIC17.56■□□□□ 0.4
CACNA1EQ15878 SEPT2-203ENST00000391971 3315 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
CACNA1EQ15878 DOK3-201ENST00000312943 2292 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
CACNA1EQ15878 LARP4-210ENST00000522085 1577 ntTSL 2 BASIC17.56■□□□□ 0.4
CACNA1EQ15878 PLCB2-204ENST00000557821 4517 ntAPPRIS ALT1 TSL 1 (best) BASIC17.56■□□□□ 0.4
CACNA1EQ15878 AL355315.1-201ENST00000370649 1848 ntAPPRIS P1 TSL 2 BASIC17.55■□□□□ 0.4
CACNA1EQ15878 HIST1H2BL-201ENST00000377401 488 ntAPPRIS P1 BASIC17.55■□□□□ 0.4
CACNA1EQ15878 PMP22-202ENST00000395936 816 ntTSL 3 BASIC17.55■□□□□ 0.4
CACNA1EQ15878 PLA2G12A-202ENST00000502283 1189 ntAPPRIS ALT2 TSL 1 (best) BASIC17.55■□□□□ 0.4
CACNA1EQ15878 COX5A-202ENST00000562233 441 ntTSL 3 BASIC17.55■□□□□ 0.4
CACNA1EQ15878 TCAP-202ENST00000578283 583 ntTSL 5 BASIC17.55■□□□□ 0.4
CACNA1EQ15878 PLEKHM2-201ENST00000375793 4004 ntAPPRIS ALT2 TSL 5 BASIC17.55■□□□□ 0.4
CACNA1EQ15878 SHCBP1L-201ENST00000367547 2317 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
CACNA1EQ15878 PAQR4-201ENST00000293978 2644 ntTSL 2 BASIC17.55■□□□□ 0.4
CACNA1EQ15878 AC010460.3-201ENST00000511359 1579 ntBASIC17.55■□□□□ 0.4
CACNA1EQ15878 AC132938.6-201ENST00000623828 1655 ntBASIC17.55■□□□□ 0.4
CACNA1EQ15878 REEP2-201ENST00000254901 2099 ntAPPRIS P3 TSL 1 (best) BASIC17.55■□□□□ 0.4
CACNA1EQ15878 ADCK5-201ENST00000308860 1949 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
CACNA1EQ15878 NPTXR-201ENST00000333039 5784 ntAPPRIS ALT2 TSL 1 (best) BASIC17.55■□□□□ 0.4
CACNA1EQ15878 C11orf80-214ENST00000532565 1948 ntAPPRIS ALT2 TSL 5 BASIC17.55■□□□□ 0.4
CACNA1EQ15878 ESPNP-201ENST00000270691 2015 ntBASIC17.55■□□□□ 0.4
CACNA1EQ15878 CPEB2-202ENST00000345451 2013 ntAPPRIS ALT2 TSL 1 (best) BASIC17.55■□□□□ 0.4
CACNA1EQ15878 AC005332.7-201ENST00000614046 2005 ntBASIC17.55■□□□□ 0.4
CACNA1EQ15878 ERCC2-203ENST00000391944 2334 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
CACNA1EQ15878 PLEKHA8-203ENST00000396259 2840 ntTSL 2 BASIC17.55■□□□□ 0.4
CACNA1EQ15878 TMTC1-203ENST00000539277 2758 ntAPPRIS P2 TSL 1 (best) BASIC17.55■□□□□ 0.4
CACNA1EQ15878 IRF7-203ENST00000397566 2051 ntAPPRIS P4 TSL 1 (best) BASIC17.55■□□□□ 0.4
CACNA1EQ15878 MORN1-203ENST00000378531 1798 ntAPPRIS P3 TSL 2 BASIC17.55■□□□□ 0.4
CACNA1EQ15878 AP002414.3-201ENST00000589352 1468 ntBASIC17.55■□□□□ 0.4
CACNA1EQ15878 SRSF2-205ENST00000508921 1390 ntTSL 2 BASIC17.55■□□□□ 0.4
CACNA1EQ15878 PIH1D1-201ENST00000262265 1192 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
CACNA1EQ15878 GSTO1-202ENST00000369713 972 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
CACNA1EQ15878 AL096828.1-201ENST00000423020 542 ntTSL 4 BASIC17.55■□□□□ 0.4
CACNA1EQ15878 MLF1-210ENST00000484955 1247 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
CACNA1EQ15878 TIMM17B-208ENST00000495490 939 ntTSL 5 BASIC17.55■□□□□ 0.4
CACNA1EQ15878 CRB3-204ENST00000600229 1078 ntAPPRIS ALT2 TSL 2 BASIC17.55■□□□□ 0.4
CACNA1EQ15878 AC244153.1-202ENST00000617855 482 ntTSL 3 BASIC17.55■□□□□ 0.4
CACNA1EQ15878 AC004817.3-201ENST00000602957 2129 ntBASIC17.55■□□□□ 0.4
CACNA1EQ15878 FAM43B-201ENST00000332947 2572 ntAPPRIS P1 BASIC17.55■□□□□ 0.4
CACNA1EQ15878 AC097374.2-201ENST00000618617 1306 ntBASIC17.55■□□□□ 0.4
CACNA1EQ15878 RAB3IP-202ENST00000362025 2055 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
CACNA1EQ15878 FAM157B-201ENST00000446912 1795 ntTSL 2 BASIC17.54■□□□□ 0.4
CACNA1EQ15878 KRT8P47-201ENST00000604727 1398 ntBASIC17.54■□□□□ 0.4
CACNA1EQ15878 PHF2-201ENST00000359246 5569 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
CACNA1EQ15878 MCL1-201ENST00000307940 1110 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
CACNA1EQ15878 RPS17-201ENST00000330244 592 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
CACNA1EQ15878 TRIM36-203ENST00000379618 693 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
CACNA1EQ15878 CD9-202ENST00000382515 1229 ntTSL 5 BASIC17.54■□□□□ 0.4
CACNA1EQ15878 CENPM-204ENST00000402420 688 ntTSL 5 BASIC17.54■□□□□ 0.4
CACNA1EQ15878 AC007967.3-201ENST00000434308 558 ntBASIC17.54■□□□□ 0.4
CACNA1EQ15878 NDUFB2-208ENST00000471136 499 ntTSL 3 BASIC17.54■□□□□ 0.4
CACNA1EQ15878 SMIM29-206ENST00000476320 1297 ntAPPRIS P1 TSL 2 BASIC17.54■□□□□ 0.4
CACNA1EQ15878 DMWD-202ENST00000377735 3292 ntAPPRIS ALT2 TSL 5 BASIC17.54■□□□□ 0.4
CACNA1EQ15878 FAM53A-205ENST00000472884 2086 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
CACNA1EQ15878 AP5S1-201ENST00000246041 1960 ntAPPRIS P1 TSL 4 BASIC17.54■□□□□ 0.4
CACNA1EQ15878 RAC1-201ENST00000348035 2323 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Retrieved 100 of 98,524 protein–RNA pairs in 29.2 ms