Protein–RNA interactions for Protein: P61011

SRP54, Signal recognition particle 54 kDa protein, humanhuman

Known RBP Predictions only

Length 504 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SRP54P61011 PRSS23-201ENST00000280258 4015 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
SRP54P61011 CSF3-206ENST00000577675 1360 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
SRP54P61011 DLK2-203ENST00000372488 1590 ntAPPRIS P3 TSL 1 (best) BASIC17.86■□□□□ 0.45
SRP54P61011 ARHGEF2-204ENST00000368315 1645 ntTSL 5 BASIC17.86■□□□□ 0.45
SRP54P61011 LINC01126-201ENST00000623515 1646 ntBASIC17.86■□□□□ 0.45
SRP54P61011 GSDMD-201ENST00000262580 1762 ntAPPRIS P2 TSL 1 (best) BASIC17.86■□□□□ 0.45
SRP54P61011 FAM53A-205ENST00000472884 2086 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
SRP54P61011 SYBU-232ENST00000533171 2498 ntAPPRIS ALT2 TSL 2 BASIC17.86■□□□□ 0.45
SRP54P61011 PPM1B-201ENST00000282412 2606 ntAPPRIS P4 TSL 1 (best) BASIC17.85■□□□□ 0.45
SRP54P61011 ADGRD2-201ENST00000334810 3244 ntAPPRIS P1 TSL 5 BASIC17.85■□□□□ 0.45
SRP54P61011 DCHS2-201ENST00000339452 5064 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
SRP54P61011 ASXL1-202ENST00000375687 7031 ntAPPRIS P2 TSL 5 BASIC17.85■□□□□ 0.45
SRP54P61011 RARRES1-201ENST00000237696 1952 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
SRP54P61011 NARFL-201ENST00000251588 2112 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
SRP54P61011 CCDC134-201ENST00000255784 1270 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
SRP54P61011 RND1-201ENST00000309739 1681 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
SRP54P61011 ANKRD37-201ENST00000335174 1141 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
SRP54P61011 AURKA-202ENST00000347343 2248 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
SRP54P61011 BEX4-201ENST00000372691 1066 ntAPPRIS P1 TSL 2 BASIC17.85■□□□□ 0.45
SRP54P61011 CHCHD1-201ENST00000372833 835 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
SRP54P61011 HMCES-201ENST00000383463 2515 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
SRP54P61011 RPL36-202ENST00000394580 556 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
SRP54P61011 BIRC7-203ENST00000395306 593 ntTSL 2 BASIC17.85■□□□□ 0.45
SRP54P61011 NOMO3-202ENST00000399336 4356 ntAPPRIS P2 TSL 1 (best) BASIC17.85■□□□□ 0.45
SRP54P61011 MAFF-202ENST00000407965 2325 ntAPPRIS P1 TSL 2 BASIC17.85■□□□□ 0.45
SRP54P61011 FAM41C-202ENST00000432963 504 ntTSL 2 BASIC17.85■□□□□ 0.45
SRP54P61011 CCT6P1-202ENST00000442266 1317 ntTSL 2 BASIC17.85■□□□□ 0.45
SRP54P61011 IRAK3-202ENST00000457197 1853 ntTSL 2 BASIC17.85■□□□□ 0.45
SRP54P61011 EHMT1-203ENST00000460843 5137 ntAPPRIS P2 TSL 5 BASIC17.85■□□□□ 0.45
SRP54P61011 KLF6-204ENST00000469435 2169 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
SRP54P61011 CACNG5-202ENST00000533854 1311 ntAPPRIS P1 TSL 2 BASIC17.85■□□□□ 0.45
SRP54P61011 AC098818.2-201ENST00000564925 2320 ntBASIC17.85■□□□□ 0.45
SRP54P61011 IKBKG-214ENST00000618670 2069 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
SRP54P61011 EML2-AS1-203ENST00000623430 886 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
SRP54P61011 AGAP2-201ENST00000257897 5388 ntAPPRIS P3 TSL 1 (best) BASIC17.85■□□□□ 0.45
SRP54P61011 KCNH2-202ENST00000330883 3267 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
SRP54P61011 CDCA7L-203ENST00000406877 3066 ntAPPRIS P3 TSL 1 (best) BASIC17.85■□□□□ 0.45
SRP54P61011 LTBP4-203ENST00000308370 4948 ntAPPRIS P4 TSL 1 (best) BASIC17.84■□□□□ 0.45
SRP54P61011 DACT2-204ENST00000610183 2088 ntAPPRIS ALT2 TSL 1 (best) BASIC17.84■□□□□ 0.45
SRP54P61011 CD8A-202ENST00000352580 1977 ntAPPRIS ALT2 TSL 2 BASIC17.84■□□□□ 0.45
SRP54P61011 TBX20-201ENST00000408931 1871 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
SRP54P61011 RASSF1-210ENST00000616212 1842 ntTSL 2 BASIC17.84■□□□□ 0.45
SRP54P61011 AL031598.1-201ENST00000561511 1773 ntBASIC17.84■□□□□ 0.45
SRP54P61011 CRKL-201ENST00000354336 5325 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
SRP54P61011 FAM110A-203ENST00000381939 1737 ntAPPRIS P1 TSL 3 BASIC17.84■□□□□ 0.45
SRP54P61011 C21orf59-201ENST00000290155 1692 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
SRP54P61011 ASL-205ENST00000395332 1622 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
SRP54P61011 MSL1-202ENST00000398532 4707 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
SRP54P61011 MARK2-201ENST00000350490 2903 ntAPPRIS ALT2 TSL 1 (best) BASIC17.84■□□□□ 0.45
SRP54P61011 GTPBP8-208ENST00000619116 1378 ntTSL 5 BASIC17.84■□□□□ 0.45
SRP54P61011 TPM1-203ENST00000317516 738 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
SRP54P61011 CMTM1-204ENST00000336328 606 ntAPPRIS ALT2 TSL 1 (best) BASIC17.84■□□□□ 0.45
SRP54P61011 CDKN1C-201ENST00000380725 1220 ntAPPRIS ALT2 TSL 2 BASIC17.84■□□□□ 0.45
SRP54P61011 SEC61G-203ENST00000415949 732 ntAPPRIS P1 TSL 5 BASIC17.84■□□□□ 0.45
SRP54P61011 SBDSP1-202ENST00000423945 618 ntTSL 3 BASIC17.84■□□□□ 0.45
SRP54P61011 AC093459.1-201ENST00000444567 481 ntTSL 3 BASIC17.84■□□□□ 0.45
SRP54P61011 AL611929.1-201ENST00000457340 449 ntTSL 3 BASIC17.84■□□□□ 0.45
SRP54P61011 BET1L-206ENST00000486280 665 ntTSL 3 BASIC17.84■□□□□ 0.45
SRP54P61011 CDV3-207ENST00000508481 661 ntTSL 3 BASIC17.84■□□□□ 0.45
SRP54P61011 CMTM1-213ENST00000529506 581 ntAPPRIS ALT2 TSL 1 (best) BASIC17.84■□□□□ 0.45
SRP54P61011 TPM1-218ENST00000559281 851 ntTSL 5 BASIC17.84■□□□□ 0.45
SRP54P61011 AL353801.3-201ENST00000609898 542 ntBASIC17.84■□□□□ 0.45
SRP54P61011 AL162497.1-201ENST00000615635 518 ntTSL 4 BASIC17.84■□□□□ 0.45
SRP54P61011 CEACAM3-208ENST00000630848 1110 ntAPPRIS ALT2 TSL 5 BASIC17.84■□□□□ 0.45
SRP54P61011 NHLH2-201ENST00000320238 2512 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
SRP54P61011 PCCA-201ENST00000376279 2418 ntTSL 2 BASIC17.84■□□□□ 0.45
SRP54P61011 ARHGAP22-203ENST00000374172 2380 ntTSL 2 BASIC17.84■□□□□ 0.45
SRP54P61011 NAGPA-AS1-202ENST00000632058 2265 ntTSL 2 BASIC17.84■□□□□ 0.45
SRP54P61011 TMEM8B-204ENST00000439587 2150 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
SRP54P61011 FGFR3-205ENST00000440486 4287 ntAPPRIS P3 TSL 5 BASIC17.84■□□□□ 0.45
SRP54P61011 FBXL18-205ENST00000620087 2076 ntTSL 5 BASIC17.84■□□□□ 0.45
SRP54P61011 ZNF768-202ENST00000562803 1999 ntAPPRIS ALT2 TSL 3 BASIC17.84■□□□□ 0.45
SRP54P61011 EXO5-202ENST00000358527 1892 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
SRP54P61011 UBE2O-201ENST00000319380 5436 ntAPPRIS P2 TSL 1 (best) BASIC17.84■□□□□ 0.45
SRP54P61011 TMEM259-209ENST00000592590 2509 ntTSL 5 BASIC17.83■□□□□ 0.45
SRP54P61011 INF2-204ENST00000398337 1689 ntTSL 1 (best) BASIC17.83■□□□□ 0.45
SRP54P61011 EMB-204ENST00000508934 1617 ntAPPRIS ALT2 TSL 5 BASIC17.83■□□□□ 0.45
SRP54P61011 TSR2-201ENST00000375151 1534 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
SRP54P61011 CIAO1-203ENST00000488633 1533 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
SRP54P61011 MTMR1-208ENST00000445323 4516 ntTSL 1 (best) BASIC17.83■□□□□ 0.45
SRP54P61011 NUMBL-207ENST00000598779 2249 ntAPPRIS ALT2 TSL 1 (best) BASIC17.83■□□□□ 0.45
SRP54P61011 LINC00602-201ENST00000629776 2065 ntBASIC17.83■□□□□ 0.45
SRP54P61011 UPP1-203ENST00000395564 1375 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
SRP54P61011 SUSD2-201ENST00000358321 3404 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
SRP54P61011 HBZ-201ENST00000252951 755 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
SRP54P61011 TMEM234-202ENST00000344461 721 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
SRP54P61011 HYI-201ENST00000372425 1265 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
SRP54P61011 EMBP1-201ENST00000458200 901 ntBASIC17.83■□□□□ 0.44
SRP54P61011 AC068472.1-201ENST00000474589 881 ntBASIC17.83■□□□□ 0.44
SRP54P61011 AP003555.3-201ENST00000534086 432 ntTSL 4 BASIC17.83■□□□□ 0.44
SRP54P61011 AP001453.1-201ENST00000534988 923 ntTSL 3 BASIC17.83■□□□□ 0.44
SRP54P61011 FICD-205ENST00000552758 603 ntTSL 2 BASIC17.83■□□□□ 0.44
SRP54P61011 KCNA7-201ENST00000221444 4372 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
SRP54P61011 ARRB1-201ENST00000360025 1895 ntAPPRIS P3 TSL 1 (best) BASIC17.83■□□□□ 0.44
SRP54P61011 DMRT2-201ENST00000259622 2459 ntTSL 2 BASIC17.83■□□□□ 0.44
SRP54P61011 CDK11B-207ENST00000626918 2457 ntTSL 5 BASIC17.83■□□□□ 0.44
SRP54P61011 FGFR3-202ENST00000340107 4293 ntAPPRIS ALT2 TSL 5 BASIC17.83■□□□□ 0.44
SRP54P61011 ACOT7-202ENST00000377842 1813 ntAPPRIS ALT2 TSL 1 (best) BASIC17.83■□□□□ 0.44
SRP54P61011 ENOPH1-202ENST00000505846 1689 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
SRP54P61011 CELF6-204ENST00000543764 1676 ntTSL 2 BASIC17.83■□□□□ 0.44
Retrieved 100 of 98,524 protein–RNA pairs in 21.6 ms