Protein–RNA interactions for Protein: P56880

CLDN20, Claudin-20, humanhuman

Predictions only

Length 219 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN20P56880 BX890604.1-205ENST00000425492 856 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
CLDN20P56880 AC004540.1-201ENST00000439120 891 ntTSL 2 BASIC16.63■□□□□ 0.25
CLDN20P56880 RNF146-204ENST00000476956 884 ntTSL 2 BASIC16.63■□□□□ 0.25
CLDN20P56880 CLN6-204ENST00000564752 900 ntTSL 3 BASIC16.63■□□□□ 0.25
CLDN20P56880 GEMIN7-203ENST00000591607 848 ntAPPRIS P1 TSL 3 BASIC16.63■□□□□ 0.25
CLDN20P56880 RPARP-AS1-206ENST00000596366 631 ntTSL 3 BASIC16.63■□□□□ 0.25
CLDN20P56880 FGF14-AS2-201ENST00000606448 1074 ntBASIC16.63■□□□□ 0.25
CLDN20P56880 CD177-202ENST00000607855 536 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
CLDN20P56880 ELMOD1-202ENST00000443271 1990 ntAPPRIS P1 TSL 2 BASIC16.63■□□□□ 0.25
CLDN20P56880 C9orf66-201ENST00000382387 2918 ntAPPRIS P1 BASIC16.63■□□□□ 0.25
CLDN20P56880 IL17RC-215ENST00000455057 2244 ntAPPRIS ALT2 TSL 1 (best) BASIC16.63■□□□□ 0.25
CLDN20P56880 STIM2-212ENST00000639640 2241 ntAPPRIS P3 TSL 1 (best) BASIC16.63■□□□□ 0.25
CLDN20P56880 IGSF9B-206ENST00000533871 5050 ntAPPRIS P2 TSL 5 BASIC16.63■□□□□ 0.25
CLDN20P56880 RNH1-205ENST00000397615 2014 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
CLDN20P56880 CARNS1-202ENST00000445895 3971 ntAPPRIS P1 TSL 5 BASIC16.63■□□□□ 0.25
CLDN20P56880 GOLGA2P10-204ENST00000618004 1349 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
CLDN20P56880 KIAA1324L-207ENST00000444627 3527 ntTSL 5 BASIC16.63■□□□□ 0.25
CLDN20P56880 AC008764.6-201ENST00000595909 2069 ntBASIC16.63■□□□□ 0.25
CLDN20P56880 FBXL15-201ENST00000224862 2362 ntAPPRIS P2 TSL 1 (best) BASIC16.63■□□□□ 0.25
CLDN20P56880 CRELD2-201ENST00000328268 1357 ntAPPRIS P3 TSL 1 (best) BASIC16.63■□□□□ 0.25
CLDN20P56880 SPAG6-203ENST00000376624 2605 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
CLDN20P56880 STXBP2-202ENST00000414284 1859 ntAPPRIS ALT1 TSL 1 (best) BASIC16.63■□□□□ 0.25
CLDN20P56880 SLC39A7-201ENST00000374675 2153 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
CLDN20P56880 TFEB-206ENST00000403298 2162 ntAPPRIS P1 TSL 5 BASIC16.62■□□□□ 0.25
CLDN20P56880 STX11-201ENST00000367568 1926 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
CLDN20P56880 ZNF131-206ENST00000505606 3209 ntAPPRIS P1 TSL 5 BASIC16.62■□□□□ 0.25
CLDN20P56880 TCEA1-201ENST00000396401 2718 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
CLDN20P56880 UBQLN4-201ENST00000368309 3576 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
CLDN20P56880 OSMR-202ENST00000502536 1740 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
CLDN20P56880 CD24-204ENST00000619133 2513 ntAPPRIS P3 TSL 2 BASIC16.62■□□□□ 0.25
CLDN20P56880 JAM2-202ENST00000400532 1757 ntAPPRIS ALT2 TSL 1 (best) BASIC16.62■□□□□ 0.25
CLDN20P56880 CAPN5-205ENST00000529629 2333 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
CLDN20P56880 ATP1B1-202ENST00000367816 2608 ntAPPRIS P1 TSL 5 BASIC16.62■□□□□ 0.25
CLDN20P56880 FARP1-242ENST00000627049 5103 ntTSL 5 BASIC16.62■□□□□ 0.25
CLDN20P56880 FAM3A-204ENST00000369643 1521 ntAPPRIS P1 TSL 2 BASIC16.62■□□□□ 0.25
CLDN20P56880 LINC00634-201ENST00000381348 1510 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
CLDN20P56880 STEAP1B-201ENST00000404369 1515 ntAPPRIS ALT2 TSL 1 (best) BASIC16.62■□□□□ 0.25
CLDN20P56880 PTPN6-204ENST00000456013 2389 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
CLDN20P56880 FGFR1-203ENST00000341462 6054 ntTSL 5 BASIC16.62■□□□□ 0.25
CLDN20P56880 KHDC1-201ENST00000257765 1134 ntAPPRIS P3 TSL 1 (best) BASIC16.62■□□□□ 0.25
CLDN20P56880 UXT-201ENST00000333119 574 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
CLDN20P56880 TTC3-203ENST00000399010 2115 ntTSL 5 BASIC16.62■□□□□ 0.25
CLDN20P56880 DGUOK-AS1-203ENST00000453103 601 ntTSL 3 BASIC16.62■□□□□ 0.25
CLDN20P56880 LCN10-205ENST00000497771 723 ntAPPRIS P2 TSL 1 (best) BASIC16.62■□□□□ 0.25
CLDN20P56880 SLF2-205ENST00000609386 891 ntAPPRIS ALT2 BASIC16.62■□□□□ 0.25
CLDN20P56880 KHDC1-207ENST00000610435 1101 ntAPPRIS P3 TSL 5 BASIC16.62■□□□□ 0.25
CLDN20P56880 DHRS2-210ENST00000611765 1287 ntAPPRIS ALT2 TSL 2 BASIC16.62■□□□□ 0.25
CLDN20P56880 AC083849.1-201ENST00000615227 514 ntBASIC16.62■□□□□ 0.25
CLDN20P56880 AC079602.3-201ENST00000623931 403 ntBASIC16.62■□□□□ 0.25
CLDN20P56880 ANKRD9-201ENST00000286918 6727 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
CLDN20P56880 CDK11B-208ENST00000629289 2490 ntTSL 5 BASIC16.62■□□□□ 0.25
CLDN20P56880 CDK11B-209ENST00000629312 2496 ntTSL 5 BASIC16.62■□□□□ 0.25
CLDN20P56880 WFDC1-203ENST00000568638 1319 ntAPPRIS P1 TSL 2 BASIC16.62■□□□□ 0.25
CLDN20P56880 NTMT1-211ENST00000617943 1346 ntTSL 3 BASIC16.62■□□□□ 0.25
CLDN20P56880 AL360181.3-201ENST00000468317 1605 ntAPPRIS P1 TSL 5 BASIC16.62■□□□□ 0.25
CLDN20P56880 FIBIN-201ENST00000318627 1938 ntAPPRIS P1 BASIC16.62■□□□□ 0.25
CLDN20P56880 NOP9-202ENST00000396802 1942 ntTSL 5 BASIC16.62■□□□□ 0.25
CLDN20P56880 CD248-201ENST00000311330 2558 ntAPPRIS P1 BASIC16.62■□□□□ 0.25
CLDN20P56880 SCAND1-203ENST00000615116 1371 ntAPPRIS P1 TSL 5 BASIC16.62■□□□□ 0.25
CLDN20P56880 TNIP1-221ENST00000610874 2629 ntTSL 5 BASIC16.62■□□□□ 0.25
CLDN20P56880 TRMT6-201ENST00000203001 2327 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
CLDN20P56880 ARHGAP22-203ENST00000374172 2380 ntTSL 2 BASIC16.62■□□□□ 0.25
CLDN20P56880 LINC01311-201ENST00000565162 1445 ntBASIC16.62■□□□□ 0.25
CLDN20P56880 HPS3-202ENST00000460120 2745 ntTSL 2 BASIC16.61■□□□□ 0.25
CLDN20P56880 SIRPAP1-201ENST00000448467 1770 ntBASIC16.61■□□□□ 0.25
CLDN20P56880 SLC27A2-202ENST00000380902 2181 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
CLDN20P56880 HOOK2-202ENST00000397668 2513 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
CLDN20P56880 GUCA1A-201ENST00000053469 1874 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
CLDN20P56880 PIK3R2-201ENST00000222254 4033 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
CLDN20P56880 SRP9-203ENST00000366839 1596 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
CLDN20P56880 ISCU-202ENST00000392807 1069 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
CLDN20P56880 EEF1D-202ENST00000395119 1249 ntAPPRIS ALT2 TSL 1 (best) BASIC16.61■□□□□ 0.25
CLDN20P56880 ISCU-203ENST00000431221 799 ntTSL 2 BASIC16.61■□□□□ 0.25
CLDN20P56880 AP006284.1-202ENST00000527113 527 ntTSL 4 BASIC16.61■□□□□ 0.25
CLDN20P56880 AC127526.4-201ENST00000527970 983 ntTSL 3 BASIC16.61■□□□□ 0.25
CLDN20P56880 TPM1-226ENST00000560959 925 ntTSL 2 BASIC16.61■□□□□ 0.25
CLDN20P56880 USF2-205ENST00000594064 1179 ntTSL 2 BASIC16.61■□□□□ 0.25
CLDN20P56880 AC092902.2-222ENST00000626312 568 ntTSL 5 BASIC16.61■□□□□ 0.25
CLDN20P56880 FADS1-204ENST00000433932 1690 ntTSL 2 BASIC16.61■□□□□ 0.25
CLDN20P56880 SEPT9-236ENST00000591088 1691 ntAPPRIS ALT2 TSL 2 BASIC16.61■□□□□ 0.25
CLDN20P56880 RSBN1-205ENST00000615321 2418 ntTSL 2 BASIC16.61■□□□□ 0.25
CLDN20P56880 DCP1B-201ENST00000280665 2086 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
CLDN20P56880 ARFRP1-213ENST00000619493 2456 ntAPPRIS P1 TSL 3 BASIC16.61■□□□□ 0.25
CLDN20P56880 RUSC2-202ENST00000455600 5636 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
CLDN20P56880 IVNS1ABP-202ENST00000367498 4199 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
CLDN20P56880 B3GALT5-206ENST00000615480 2617 ntAPPRIS P1 TSL 2 BASIC16.61■□□□□ 0.25
CLDN20P56880 CORO6-212ENST00000584969 1416 ntAPPRIS ALT1 TSL 5 BASIC16.61■□□□□ 0.25
CLDN20P56880 IL17RC-206ENST00000416074 2342 ntAPPRIS ALT2 TSL 1 (best) BASIC16.61■□□□□ 0.25
CLDN20P56880 MMEL1-201ENST00000378412 2849 ntAPPRIS P1 TSL 2 BASIC16.6■□□□□ 0.25
CLDN20P56880 DTX2-202ENST00000413936 2472 ntAPPRIS P3 TSL 1 (best) BASIC16.6■□□□□ 0.25
CLDN20P56880 AC020661.1-201ENST00000503052 1584 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
CLDN20P56880 BFSP1-205ENST00000536626 2075 ntTSL 2 BASIC16.6■□□□□ 0.25
CLDN20P56880 HBZP1-201ENST00000354915 429 ntBASIC16.6■□□□□ 0.25
CLDN20P56880 SYCE1L-201ENST00000378644 858 ntAPPRIS P2 TSL 5 BASIC16.6■□□□□ 0.25
CLDN20P56880 AP000593.1-201ENST00000393668 712 ntBASIC16.6■□□□□ 0.25
CLDN20P56880 HELT-202ENST00000505610 846 ntAPPRIS ALT1 TSL 1 (best) BASIC16.6■□□□□ 0.25
CLDN20P56880 AP002807.1-202ENST00000526897 791 ntTSL 2 BASIC16.6■□□□□ 0.25
CLDN20P56880 AP003396.3-201ENST00000530918 778 ntTSL 5 BASIC16.6■□□□□ 0.25
CLDN20P56880 SSSCA1-206ENST00000531405 879 ntTSL 2 BASIC16.6■□□□□ 0.25
CLDN20P56880 C17orf49-208ENST00000552402 760 ntTSL 2 BASIC16.6■□□□□ 0.25
Retrieved 100 of 98,524 protein–RNA pairs in 31.8 ms