Protein–RNA interactions for Protein: P54252

ATXN3, Ataxin-3, humanhuman

Predicted RBP Predictions only

Length 364 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3P54252 CMPK1-205ENST00000471289 816 ntTSL 2 BASIC18.51■□□□□ 0.55
ATXN3P54252 VEGFA-222ENST00000520948 1199 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
ATXN3P54252 CARHSP1-205ENST00000562843 843 ntTSL 2 BASIC18.51■□□□□ 0.55
ATXN3P54252 SPINT1-AS1-202ENST00000564302 643 ntTSL 2 BASIC18.51■□□□□ 0.55
ATXN3P54252 LAT-211ENST00000566177 786 ntAPPRIS ALT2 TSL 1 (best) BASIC18.51■□□□□ 0.55
ATXN3P54252 ATP5D-207ENST00000591660 637 ntAPPRIS P1 TSL 3 BASIC18.51■□□□□ 0.55
ATXN3P54252 AC116565.2-201ENST00000637674 1854 ntTSL 2 BASIC18.51■□□□□ 0.55
ATXN3P54252 TUBA3FP-202ENST00000422086 1974 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
ATXN3P54252 MIR4300HG-201ENST00000500502 1397 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
ATXN3P54252 CCDC120-204ENST00000597275 2752 ntAPPRIS P3 TSL 2 BASIC18.51■□□□□ 0.55
ATXN3P54252 OSR2-201ENST00000297565 1838 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
ATXN3P54252 NR4A1-203ENST00000394824 2639 ntAPPRIS P1 TSL 5 BASIC18.51■□□□□ 0.55
ATXN3P54252 ACYP2-203ENST00000406041 1913 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
ATXN3P54252 SUSD2-201ENST00000358321 3404 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
ATXN3P54252 TRIP4-201ENST00000261884 2045 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
ATXN3P54252 AC126773.2-201ENST00000562172 1682 ntTSL 3 BASIC18.5■□□□□ 0.55
ATXN3P54252 CACNA1A-225ENST00000636389 8137 ntAPPRIS ALT2 TSL 5 BASIC18.5■□□□□ 0.55
ATXN3P54252 SRRM2-AS1-203ENST00000571305 1344 ntTSL 2 BASIC18.5■□□□□ 0.55
ATXN3P54252 FARP1-242ENST00000627049 5103 ntTSL 5 BASIC18.5■□□□□ 0.55
ATXN3P54252 AC090164.3-201ENST00000610780 2143 ntBASIC18.5■□□□□ 0.55
ATXN3P54252 AATF-208ENST00000619387 2141 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
ATXN3P54252 DOC2B-203ENST00000613549 6048 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
ATXN3P54252 DEF8-211ENST00000563795 1767 ntTSL 5 BASIC18.5■□□□□ 0.55
ATXN3P54252 GNE-201ENST00000377902 2565 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
ATXN3P54252 NRG2-205ENST00000361474 3020 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
ATXN3P54252 C6orf203-202ENST00000405204 1420 ntAPPRIS P1 TSL 2 BASIC18.5■□□□□ 0.55
ATXN3P54252 APBB1-207ENST00000529519 1442 ntTSL 5 BASIC18.5■□□□□ 0.55
ATXN3P54252 KAT2A-201ENST00000225916 3109 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
ATXN3P54252 TUBA8-201ENST00000316027 1518 ntTSL 2 BASIC18.5■□□□□ 0.55
ATXN3P54252 PGRMC2-208ENST00000613358 3783 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
ATXN3P54252 CHTOP-204ENST00000368694 2096 ntAPPRIS P3 TSL 1 (best) BASIC18.5■□□□□ 0.55
ATXN3P54252 CCDC157-203ENST00000405659 3052 ntAPPRIS P3 TSL 1 (best) BASIC18.5■□□□□ 0.55
ATXN3P54252 CLDND1-203ENST00000394181 2170 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
ATXN3P54252 DCST1-204ENST00000423025 2199 ntAPPRIS ALT2 TSL 2 BASIC18.5■□□□□ 0.55
ATXN3P54252 CYP2D7-203ENST00000433992 1740 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
ATXN3P54252 CYP2D7-207ENST00000612115 1734 ntAPPRIS P1 TSL 5 BASIC18.5■□□□□ 0.55
ATXN3P54252 KCNK3-201ENST00000302909 6162 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
ATXN3P54252 CMTM1-204ENST00000336328 606 ntAPPRIS ALT2 TSL 1 (best) BASIC18.5■□□□□ 0.55
ATXN3P54252 CORT-201ENST00000377049 1130 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
ATXN3P54252 RPP38-203ENST00000378202 1030 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
ATXN3P54252 ISG15-201ENST00000379389 711 ntAPPRIS P2 TSL 1 (best) BASIC18.5■□□□□ 0.55
ATXN3P54252 AL611929.1-201ENST00000457340 449 ntTSL 3 BASIC18.5■□□□□ 0.55
ATXN3P54252 FOSL1P1-201ENST00000511041 816 ntBASIC18.5■□□□□ 0.55
ATXN3P54252 CMTM1-213ENST00000529506 581 ntAPPRIS ALT2 TSL 1 (best) BASIC18.5■□□□□ 0.55
ATXN3P54252 CCDC61-201ENST00000536603 1282 ntAPPRIS ALT2 TSL 1 (best) BASIC18.5■□□□□ 0.55
ATXN3P54252 AC006538.3-201ENST00000612495 578 ntBASIC18.5■□□□□ 0.55
ATXN3P54252 AC112497.1-201ENST00000624824 639 ntBASIC18.5■□□□□ 0.55
ATXN3P54252 LRRC36-201ENST00000329956 2395 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
ATXN3P54252 TACSTD2-201ENST00000371225 2351 ntAPPRIS P1 BASIC18.5■□□□□ 0.55
ATXN3P54252 BORCS6-201ENST00000389017 2575 ntAPPRIS P1 BASIC18.5■□□□□ 0.55
ATXN3P54252 ARPC4-201ENST00000397261 2582 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
ATXN3P54252 AL034417.2-201ENST00000445300 2044 ntTSL 2 BASIC18.5■□□□□ 0.55
ATXN3P54252 NAT6-204ENST00000443094 1464 ntAPPRIS ALT2 TSL 1 (best) BASIC18.5■□□□□ 0.55
ATXN3P54252 MYOZ3-203ENST00000517768 1451 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
ATXN3P54252 MRPL2-202ENST00000388752 1588 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
ATXN3P54252 HNF1A-202ENST00000400024 2337 ntTSL 2 BASIC18.5■□□□□ 0.55
ATXN3P54252 ZFC3H1-206ENST00000548100 1771 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
ATXN3P54252 SYDE2-202ENST00000341460 5512 ntAPPRIS P1 TSL 5 BASIC18.5■□□□□ 0.55
ATXN3P54252 CBSL-210ENST00000624934 1992 ntTSL 5 BASIC18.5■□□□□ 0.55
ATXN3P54252 PODXL2-201ENST00000342480 2186 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
ATXN3P54252 LINC00960-201ENST00000463183 1333 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
ATXN3P54252 HBEGF-201ENST00000230990 2386 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
ATXN3P54252 WWOX-214ENST00000566780 2482 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
ATXN3P54252 BICRA-201ENST00000396720 5739 ntAPPRIS P2 TSL 5 BASIC18.49■□□□□ 0.55
ATXN3P54252 CFAP77-203ENST00000393216 1638 ntAPPRIS ALT2 TSL 1 (best) BASIC18.49■□□□□ 0.55
ATXN3P54252 RUBCN-206ENST00000449205 1603 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
ATXN3P54252 PTPDC1-202ENST00000375360 4517 ntAPPRIS ALT2 TSL 1 (best) BASIC18.49■□□□□ 0.55
ATXN3P54252 FBXO33-201ENST00000298097 3853 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
ATXN3P54252 RSPO4-201ENST00000217260 2707 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
ATXN3P54252 ASXL1-202ENST00000375687 7031 ntAPPRIS P2 TSL 5 BASIC18.49■□□□□ 0.55
ATXN3P54252 FUOM-201ENST00000278025 709 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
ATXN3P54252 PTPMT1-201ENST00000326656 928 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
ATXN3P54252 FAM239B-201ENST00000381106 1099 ntTSL 2 BASIC18.49■□□□□ 0.55
ATXN3P54252 CD99-205ENST00000381192 1245 ntAPPRIS P3 TSL 1 (best) BASIC18.49■□□□□ 0.55
ATXN3P54252 GNB1L-203ENST00000405009 1076 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
ATXN3P54252 AL023284.2-201ENST00000405850 579 ntBASIC18.49■□□□□ 0.55
ATXN3P54252 AL137026.1-202ENST00000452578 1089 ntTSL 2 BASIC18.49■□□□□ 0.55
ATXN3P54252 AC012615.1-201ENST00000565797 1299 ntBASIC18.49■□□□□ 0.55
ATXN3P54252 ZFPM1-205ENST00000569086 563 ntTSL 2 BASIC18.49■□□□□ 0.55
ATXN3P54252 ANKRD36-207ENST00000639293 1168 ntAPPRIS ALT2 TSL 5 BASIC18.49■□□□□ 0.55
ATXN3P54252 AKR1A1-214ENST00000621846 1360 ntAPPRIS P1 TSL 5 BASIC18.49■□□□□ 0.55
ATXN3P54252 PDLIM2-205ENST00000397761 1491 ntAPPRIS P1 TSL 5 BASIC18.49■□□□□ 0.55
ATXN3P54252 IL6R-208ENST00000622330 1496 ntAPPRIS ALT2 TSL 1 (best) BASIC18.49■□□□□ 0.55
ATXN3P54252 PVRIG-201ENST00000317271 1583 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
ATXN3P54252 ACVR1B-205ENST00000541224 1791 ntTSL 2 BASIC18.49■□□□□ 0.55
ATXN3P54252 STXBP2-202ENST00000414284 1859 ntAPPRIS ALT1 TSL 1 (best) BASIC18.49■□□□□ 0.55
ATXN3P54252 CARNS1-205ENST00000531040 2968 ntTSL 5 BASIC18.49■□□□□ 0.55
ATXN3P54252 SMPD4-202ENST00000409031 4896 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
ATXN3P54252 NR2F1-201ENST00000327111 3732 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
ATXN3P54252 FAM219B-204ENST00000563119 2721 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
ATXN3P54252 ATP1B1-202ENST00000367816 2608 ntAPPRIS P1 TSL 5 BASIC18.49■□□□□ 0.55
ATXN3P54252 ZBTB8A-201ENST00000316459 1943 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
ATXN3P54252 PTTG1IP-201ENST00000330938 2760 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
ATXN3P54252 PPP2R2B-203ENST00000394411 2071 ntAPPRIS P1 TSL 2 BASIC18.48■□□□□ 0.55
ATXN3P54252 TFCP2-204ENST00000548115 1862 ntTSL 5 BASIC18.48■□□□□ 0.55
ATXN3P54252 PTP4A3-202ENST00000349124 2710 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
ATXN3P54252 LINC01700-201ENST00000433952 1598 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
ATXN3P54252 SKOR1-204ENST00000554240 3597 ntAPPRIS ALT2 TSL 5 BASIC18.48■□□□□ 0.55
ATXN3P54252 PTK6-201ENST00000217185 2401 ntTSL 2 BASIC18.48■□□□□ 0.55
ATXN3P54252 GLYCTK-201ENST00000305690 1371 ntTSL 5 BASIC18.48■□□□□ 0.55
Retrieved 100 of 98,524 protein–RNA pairs in 41.5 ms