Protein–RNA interactions for Protein: P53396

ACLY, ATP-citrate synthase, humanhuman

Predictions only

Length 1,101 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ACLYP53396 LRRC14-201ENST00000292524 5328 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
ACLYP53396 CIAO1-203ENST00000488633 1533 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
ACLYP53396 TMEM177-204ENST00000424086 1738 ntAPPRIS P1 TSL 2 BASIC19.91■□□□□ 0.78
ACLYP53396 COCH-201ENST00000216361 2397 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
ACLYP53396 SHISA7-201ENST00000376325 6033 ntAPPRIS P2 TSL 2 BASIC19.91■□□□□ 0.78
ACLYP53396 WNT10A-201ENST00000258411 2547 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
ACLYP53396 TNNT1-201ENST00000291901 967 ntAPPRIS ALT2 TSL 1 (best) BASIC19.91■□□□□ 0.78
ACLYP53396 NECTIN1-202ENST00000340882 1059 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
ACLYP53396 VPS13A-AS1-201ENST00000415172 519 ntTSL 2 BASIC19.91■□□□□ 0.78
ACLYP53396 SMIM29-206ENST00000476320 1297 ntAPPRIS P1 TSL 2 BASIC19.91■□□□□ 0.78
ACLYP53396 CDKN2A-209ENST00000498628 926 ntTSL 2 BASIC19.91■□□□□ 0.78
ACLYP53396 NDUFA6-202ENST00000498737 1256 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
ACLYP53396 NDUFA6-203ENST00000602404 1080 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
ACLYP53396 AC064836.3-201ENST00000607928 673 ntBASIC19.91■□□□□ 0.78
ACLYP53396 AC022898.2-201ENST00000616822 1312 ntBASIC19.91■□□□□ 0.78
ACLYP53396 LDHD-201ENST00000300051 2067 ntAPPRIS P3 TSL 1 (best) BASIC19.91■□□□□ 0.78
ACLYP53396 PCDH8-202ENST00000377942 5088 ntAPPRIS P4 TSL 1 (best) BASIC19.91■□□□□ 0.78
ACLYP53396 MEPCE-202ENST00000414441 2261 ntTSL 2 BASIC19.91■□□□□ 0.78
ACLYP53396 TBC1D3P5-201ENST00000579401 1545 ntBASIC19.91■□□□□ 0.78
ACLYP53396 PMPCAP1-201ENST00000508114 1576 ntBASIC19.91■□□□□ 0.78
ACLYP53396 NRN1-201ENST00000244766 1624 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
ACLYP53396 HPDL-201ENST00000334815 1629 ntAPPRIS P1 BASIC19.91■□□□□ 0.78
ACLYP53396 DMKN-213ENST00000447113 1611 ntAPPRIS ALT2 TSL 1 (best) BASIC19.91■□□□□ 0.78
ACLYP53396 FOXC2-201ENST00000320354 2478 ntAPPRIS P1 BASIC19.91■□□□□ 0.78
ACLYP53396 SOX12-201ENST00000342665 4630 ntAPPRIS P1 BASIC19.9■□□□□ 0.78
ACLYP53396 FHL1-219ENST00000618438 2178 ntTSL 3 BASIC19.9■□□□□ 0.78
ACLYP53396 C14orf79-202ENST00000547315 2370 ntAPPRIS P2 TSL 1 (best) BASIC19.9■□□□□ 0.78
ACLYP53396 C19orf70-201ENST00000309324 896 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
ACLYP53396 HELT-201ENST00000338875 1008 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
ACLYP53396 RPA2-202ENST00000373909 1162 ntTSL 3 BASIC19.9■□□□□ 0.78
ACLYP53396 C6orf48-204ENST00000375639 712 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
ACLYP53396 HIST1H2BL-201ENST00000377401 488 ntAPPRIS P1 BASIC19.9■□□□□ 0.78
ACLYP53396 TNNT3-203ENST00000381557 1019 ntAPPRIS ALT2 TSL 5 BASIC19.9■□□□□ 0.78
ACLYP53396 AC073621.1-201ENST00000392730 636 ntBASIC19.9■□□□□ 0.78
ACLYP53396 C6orf226-201ENST00000408925 552 ntAPPRIS P1 BASIC19.9■□□□□ 0.78
ACLYP53396 AC211486.1-202ENST00000416371 468 ntBASIC19.9■□□□□ 0.78
ACLYP53396 AC016999.1-201ENST00000447880 452 ntTSL 3 BASIC19.9■□□□□ 0.78
ACLYP53396 USP30-AS1-201ENST00000478808 656 ntTSL 2 BASIC19.9■□□□□ 0.78
ACLYP53396 AC211476.1-201ENST00000503899 468 ntBASIC19.9■□□□□ 0.78
ACLYP53396 ANKRD13D-218ENST00000515828 1111 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
ACLYP53396 MRPL49-203ENST00000526171 501 ntTSL 2 BASIC19.9■□□□□ 0.78
ACLYP53396 COQ7-208ENST00000568985 714 ntAPPRIS P3 TSL 2 BASIC19.9■□□□□ 0.78
ACLYP53396 SDCCAG3P1-201ENST00000589292 1150 ntBASIC19.9■□□□□ 0.78
ACLYP53396 AC006557.2-201ENST00000592985 1240 ntBASIC19.9■□□□□ 0.78
ACLYP53396 SMIM22-210ENST00000615471 928 ntAPPRIS ALT2 TSL 3 BASIC19.9■□□□□ 0.78
ACLYP53396 AC073592.4-201ENST00000623827 446 ntBASIC19.9■□□□□ 0.78
ACLYP53396 AC005593.1-201ENST00000624894 515 ntBASIC19.9■□□□□ 0.78
ACLYP53396 PGM5P2-202ENST00000637225 1043 ntBASIC19.9■□□□□ 0.78
ACLYP53396 CLN5-201ENST00000377453 2629 ntAPPRIS ALT2 TSL 1 (best) BASIC19.9■□□□□ 0.78
ACLYP53396 GSN-204ENST00000373818 2657 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
ACLYP53396 LCA10-201ENST00000618311 1392 ntTSL 2 BASIC19.9■□□□□ 0.78
ACLYP53396 CYP2D7-208ENST00000614967 1504 ntTSL 5 BASIC19.9■□□□□ 0.78
ACLYP53396 CFC1-202ENST00000615342 1554 ntTSL 5 BASIC19.9■□□□□ 0.78
ACLYP53396 P2RY6-209ENST00000540342 1611 ntAPPRIS P1 TSL 2 BASIC19.9■□□□□ 0.78
ACLYP53396 REEP4-201ENST00000306306 1710 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
ACLYP53396 GIPR-201ENST00000263281 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC19.9■□□□□ 0.78
ACLYP53396 ANKMY1-209ENST00000405523 1827 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
ACLYP53396 PARP2-202ENST00000429687 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC19.9■□□□□ 0.78
ACLYP53396 AIPL1-209ENST00000575265 2111 ntAPPRIS ALT2 TSL 1 (best) BASIC19.9■□□□□ 0.78
ACLYP53396 ATP11C-203ENST00000370557 6924 ntAPPRIS ALT2 TSL 5 BASIC19.9■□□□□ 0.78
ACLYP53396 RAC1-201ENST00000348035 2323 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
ACLYP53396 TEAD2-202ENST00000377214 2440 ntAPPRIS ALT1 TSL 2 BASIC19.9■□□□□ 0.78
ACLYP53396 AFG3L1P-217ENST00000557444 2447 ntBASIC19.9■□□□□ 0.78
ACLYP53396 MEF2A-202ENST00000354410 5824 ntAPPRIS P3 TSL 1 (best) BASIC19.89■□□□□ 0.78
ACLYP53396 DLX2-201ENST00000234198 2453 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
ACLYP53396 GSDMD-201ENST00000262580 1762 ntAPPRIS P2 TSL 1 (best) BASIC19.89■□□□□ 0.77
ACLYP53396 CSPG5-201ENST00000264723 4080 ntAPPRIS P3 TSL 1 (best) BASIC19.89■□□□□ 0.77
ACLYP53396 HMGCLL1-202ENST00000308161 1314 ntTSL 2 BASIC19.89■□□□□ 0.77
ACLYP53396 DBNDD2-204ENST00000372712 1537 ntAPPRIS P1 TSL 5 BASIC19.89■□□□□ 0.77
ACLYP53396 MORN1-203ENST00000378531 1798 ntAPPRIS P3 TSL 2 BASIC19.89■□□□□ 0.77
ACLYP53396 CD99-204ENST00000381187 892 ntAPPRIS ALT2 TSL 2 BASIC19.89■□□□□ 0.77
ACLYP53396 HSPD1-202ENST00000388968 2455 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
ACLYP53396 MEN1-208ENST00000394374 3155 ntAPPRIS P3 TSL 5 BASIC19.89■□□□□ 0.77
ACLYP53396 TSEN34-202ENST00000396383 1548 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
ACLYP53396 LBH-203ENST00000404397 543 ntTSL 4 BASIC19.89■□□□□ 0.77
ACLYP53396 TRMT2A-203ENST00000404751 2498 ntAPPRIS ALT2 TSL 2 BASIC19.89■□□□□ 0.77
ACLYP53396 JMJD7-203ENST00000408047 1192 ntTSL 5 BASIC19.89■□□□□ 0.77
ACLYP53396 LMCD1-204ENST00000426878 1431 ntTSL 2 BASIC19.89■□□□□ 0.77
ACLYP53396 AC134772.1-202ENST00000435578 549 ntTSL 4 BASIC19.89■□□□□ 0.77
ACLYP53396 LINC00237-202ENST00000455890 1220 ntTSL 2 BASIC19.89■□□□□ 0.77
ACLYP53396 SRSF2-205ENST00000508921 1390 ntTSL 2 BASIC19.89■□□□□ 0.77
ACLYP53396 AL137786.1-202ENST00000555496 789 ntTSL 5 BASIC19.89■□□□□ 0.77
ACLYP53396 RPS6KL1-216ENST00000557413 2425 ntAPPRIS P1 TSL 5 BASIC19.89■□□□□ 0.77
ACLYP53396 ETFA-208ENST00000559602 792 ntTSL 3 BASIC19.89■□□□□ 0.77
ACLYP53396 AP002449.1-201ENST00000588211 474 ntTSL 2 BASIC19.89■□□□□ 0.77
ACLYP53396 PSMD8-207ENST00000592035 1581 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
ACLYP53396 RUVBL2-206ENST00000595090 2009 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
ACLYP53396 AC010522.1-205ENST00000598031 606 ntAPPRIS P1 TSL 3 BASIC19.89■□□□□ 0.77
ACLYP53396 STX6-204ENST00000542060 4809 ntTSL 2 BASIC19.88■□□□□ 0.77
ACLYP53396 KLF6-204ENST00000469435 2169 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
ACLYP53396 FAM53A-205ENST00000472884 2086 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
ACLYP53396 HSPB9-201ENST00000565659 1922 ntAPPRIS P1 BASIC19.88■□□□□ 0.77
ACLYP53396 ARSE-201ENST00000381134 1853 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
ACLYP53396 ESPN-205ENST00000461727 1869 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
ACLYP53396 WWOX-203ENST00000406884 1701 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
ACLYP53396 ANKRD53-202ENST00000360589 1666 ntAPPRIS ALT2 TSL 2 BASIC19.88■□□□□ 0.77
ACLYP53396 PNCK-203ENST00000370145 1455 ntTSL 2 BASIC19.88■□□□□ 0.77
ACLYP53396 SCYL2-201ENST00000360820 5779 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
ACLYP53396 DIAPH1-203ENST00000389057 5762 ntAPPRIS ALT2 TSL 5 BASIC19.88■□□□□ 0.77
ACLYP53396 KIAA0895-204ENST00000415803 2865 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
Retrieved 100 of 98,524 protein–RNA pairs in 11.8 ms