Protein–RNA interactions for Protein: P40198

CEACAM3, Carcinoembryonic antigen-related cell adhesion molecule 3, humanhuman

Predictions only

Length 252 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CEACAM3P40198 FAM213B-205ENST00000444521 2827 ntAPPRIS ALT2 TSL 2 BASIC14.8□□□□□ -0.04
CEACAM3P40198 C6orf203-202ENST00000405204 1420 ntAPPRIS P1 TSL 2 BASIC14.8□□□□□ -0.04
CEACAM3P40198 CABP7-201ENST00000216144 3259 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
CEACAM3P40198 SEPT9-236ENST00000591088 1691 ntAPPRIS ALT2 TSL 2 BASIC14.8□□□□□ -0.04
CEACAM3P40198 ARFRP1-207ENST00000612157 1698 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
CEACAM3P40198 SERPINA4-201ENST00000298841 1784 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
CEACAM3P40198 EIF2AK4-201ENST00000263791 5499 ntAPPRIS P1 TSL 2 BASIC14.8□□□□□ -0.04
CEACAM3P40198 SPNS1-204ENST00000352260 1948 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
CEACAM3P40198 PDLIM4-201ENST00000253754 2282 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
CEACAM3P40198 AP1AR-202ENST00000309703 2337 ntAPPRIS ALT1 TSL 1 (best) BASIC14.8□□□□□ -0.04
CEACAM3P40198 TM9SF1-206ENST00000528669 2425 ntTSL 5 BASIC14.8□□□□□ -0.04
CEACAM3P40198 MIB2-203ENST00000378712 2890 ntTSL 2 BASIC14.79□□□□□ -0.04
CEACAM3P40198 B3GNT9-201ENST00000449549 2917 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
CEACAM3P40198 ATPAF1-214ENST00000576409 4158 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
CEACAM3P40198 MAP7-209ENST00000618822 4497 ntAPPRIS ALT2 TSL 5 BASIC14.79□□□□□ -0.04
CEACAM3P40198 FARP1-242ENST00000627049 5103 ntTSL 5 BASIC14.79□□□□□ -0.04
CEACAM3P40198 KRT6C-201ENST00000252250 2289 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
CEACAM3P40198 KRT6B-201ENST00000252252 2282 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
CEACAM3P40198 TMEM190-201ENST00000291934 593 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
CEACAM3P40198 EGLN2-201ENST00000303961 2102 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
CEACAM3P40198 HOPX-201ENST00000317745 1129 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
CEACAM3P40198 ZACN-201ENST00000334586 1335 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
CEACAM3P40198 HLA-F-217ENST00000334668 1283 ntAPPRIS ALT2 BASIC14.79□□□□□ -0.04
CEACAM3P40198 TMEM179-201ENST00000341595 2513 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
CEACAM3P40198 GALNT14-202ENST00000349752 2733 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
CEACAM3P40198 HBZP1-201ENST00000354915 429 ntBASIC14.79□□□□□ -0.04
CEACAM3P40198 CHTOP-201ENST00000368686 2250 ntTSL 2 BASIC14.79□□□□□ -0.04
CEACAM3P40198 HCK-202ENST00000375852 2082 ntAPPRIS ALT2 TSL 1 (best) BASIC14.79□□□□□ -0.04
CEACAM3P40198 LAT-204ENST00000395461 1448 ntAPPRIS ALT2 TSL 1 (best) BASIC14.79□□□□□ -0.04
CEACAM3P40198 TNFRSF10C-202ENST00000397703 1242 ntTSL 2 BASIC14.79□□□□□ -0.04
CEACAM3P40198 GJB6-204ENST00000400066 1927 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
CEACAM3P40198 CACNA1G-206ENST00000416767 4899 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
CEACAM3P40198 TMEM243-203ENST00000433078 1273 ntAPPRIS P1 TSL 2 BASIC14.79□□□□□ -0.04
CEACAM3P40198 HLA-F-220ENST00000434407 884 ntBASIC14.79□□□□□ -0.04
CEACAM3P40198 STARD7-AS1-202ENST00000446816 1527 ntTSL 2 BASIC14.79□□□□□ -0.04
CEACAM3P40198 ASCL5-202ENST00000458416 1420 ntAPPRIS P1 BASIC14.79□□□□□ -0.04
CEACAM3P40198 EPB41L2-211ENST00000525271 2568 ntTSL 2 BASIC14.79□□□□□ -0.04
CEACAM3P40198 AP003396.3-201ENST00000530918 778 ntTSL 5 BASIC14.79□□□□□ -0.04
CEACAM3P40198 COPS7A-215ENST00000543155 2127 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
CEACAM3P40198 SALRNA1-201ENST00000555871 2086 ntTSL 4 BASIC14.79□□□□□ -0.04
CEACAM3P40198 ANKRD34C-AS1-201ENST00000557790 594 ntTSL 3 BASIC14.79□□□□□ -0.04
CEACAM3P40198 AC087388.1-201ENST00000571370 1112 ntBASIC14.79□□□□□ -0.04
CEACAM3P40198 FAM72C-202ENST00000584486 2297 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
CEACAM3P40198 PLPPR2-208ENST00000591608 2552 ntAPPRIS ALT2 TSL 2 BASIC14.79□□□□□ -0.04
CEACAM3P40198 SMIM29-209ENST00000636500 1186 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
CEACAM3P40198 KAT2A-201ENST00000225916 3109 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
CEACAM3P40198 DLGAP4-206ENST00000475894 3110 ntAPPRIS ALT2 TSL 2 BASIC14.79□□□□□ -0.04
CEACAM3P40198 TCERG1L-201ENST00000368642 2618 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
CEACAM3P40198 EIF3J-201ENST00000261868 2569 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
CEACAM3P40198 ZNF84-201ENST00000327668 7162 ntAPPRIS P2 TSL 1 (best) BASIC14.78□□□□□ -0.04
CEACAM3P40198 HOXC11-201ENST00000243082 2039 ntTSL 3 BASIC14.78□□□□□ -0.04
CEACAM3P40198 ESPNP-201ENST00000270691 2015 ntBASIC14.78□□□□□ -0.04
CEACAM3P40198 VKORC1L1-201ENST00000360768 5899 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
CEACAM3P40198 ACYP2-203ENST00000406041 1913 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
CEACAM3P40198 APCDD1-201ENST00000355285 3809 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
CEACAM3P40198 FIBCD1-201ENST00000372337 1868 ntTSL 5 BASIC14.78□□□□□ -0.04
CEACAM3P40198 PRR5-201ENST00000006251 1767 ntTSL 2 BASIC14.78□□□□□ -0.04
CEACAM3P40198 ENOPH1-202ENST00000505846 1689 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
CEACAM3P40198 RNPS1-219ENST00000566397 1685 ntTSL 2 BASIC14.78□□□□□ -0.04
CEACAM3P40198 FSCN2-201ENST00000334850 1551 ntTSL 5 BASIC14.78□□□□□ -0.04
CEACAM3P40198 ACVRL1-202ENST00000419526 1356 ntTSL 2 BASIC14.78□□□□□ -0.04
CEACAM3P40198 CYB561-205ENST00000542042 1302 ntTSL 2 BASIC14.78□□□□□ -0.04
CEACAM3P40198 PARK7-201ENST00000338639 949 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
CEACAM3P40198 ISOC2-202ENST00000425675 998 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
CEACAM3P40198 KRT18P38-201ENST00000449496 1282 ntBASIC14.78□□□□□ -0.04
CEACAM3P40198 NTF6B-201ENST00000591913 560 ntBASIC14.78□□□□□ -0.04
CEACAM3P40198 AC027682.4-201ENST00000605277 798 ntTSL 5 BASIC14.78□□□□□ -0.04
CEACAM3P40198 COLCA2-205ENST00000614153 1264 ntTSL 3 BASIC14.78□□□□□ -0.04
CEACAM3P40198 RELL2-202ENST00000444782 2154 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
CEACAM3P40198 XYLT2-203ENST00000507602 2107 ntTSL 2 BASIC14.78□□□□□ -0.04
CEACAM3P40198 PTP4A1-201ENST00000370651 5088 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
CEACAM3P40198 VAV1-204ENST00000596764 2775 ntTSL 2 BASIC14.78□□□□□ -0.04
CEACAM3P40198 EHMT1-204ENST00000462484 2707 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
CEACAM3P40198 SSUH2-202ENST00000341795 1799 ntAPPRIS P3 TSL 1 (best) BASIC14.78□□□□□ -0.04
CEACAM3P40198 SLC16A13-201ENST00000308027 1748 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
CEACAM3P40198 KLHL40-201ENST00000287777 2517 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
CEACAM3P40198 KRT13-201ENST00000246635 1699 ntAPPRIS P4 TSL 1 (best) BASIC14.77□□□□□ -0.04
CEACAM3P40198 CDK11A-205ENST00000378633 2458 ntTSL 1 (best) BASIC14.77□□□□□ -0.04
CEACAM3P40198 FBXO41-204ENST00000520530 3293 ntAPPRIS P1 TSL 5 BASIC14.77□□□□□ -0.04
CEACAM3P40198 UNC5CL-202ENST00000373164 1620 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
CEACAM3P40198 CD55-206ENST00000391921 2433 ntTSL 1 (best) BASIC14.77□□□□□ -0.04
CEACAM3P40198 CBX1-202ENST00000393408 2422 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
CEACAM3P40198 SNAP47-201ENST00000315781 2367 ntAPPRIS P3 TSL 1 (best) BASIC14.77□□□□□ -0.04
CEACAM3P40198 ITSN2-201ENST00000355123 6300 ntAPPRIS P4 TSL 1 (best) BASIC14.77□□□□□ -0.04
CEACAM3P40198 DPYSL4-202ENST00000368627 1545 ntTSL 5 BASIC14.77□□□□□ -0.04
CEACAM3P40198 ZBTB10-202ENST00000426744 9878 ntAPPRIS ALT2 TSL 5 BASIC14.77□□□□□ -0.04
CEACAM3P40198 CTSH-201ENST00000220166 2190 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
CEACAM3P40198 KLF6-204ENST00000469435 2169 ntTSL 1 (best) BASIC14.77□□□□□ -0.04
CEACAM3P40198 WDR45-205ENST00000376358 1432 ntTSL 2 BASIC14.77□□□□□ -0.04
CEACAM3P40198 AGPAT2-201ENST00000371694 1391 ntTSL 1 (best) BASIC14.77□□□□□ -0.04
CEACAM3P40198 BRPF1-201ENST00000383829 4736 ntAPPRIS ALT1 TSL 1 (best) BASIC14.77□□□□□ -0.04
CEACAM3P40198 LCN8-201ENST00000371688 867 ntAPPRIS P2 TSL 1 (best) BASIC14.77□□□□□ -0.05
CEACAM3P40198 AP003733.1-201ENST00000491725 852 ntBASIC14.77□□□□□ -0.05
CEACAM3P40198 AC113404.2-201ENST00000507884 177 ntBASIC14.77□□□□□ -0.05
CEACAM3P40198 LINC01582-202ENST00000561215 452 ntTSL 4 BASIC14.77□□□□□ -0.05
CEACAM3P40198 CLN6-204ENST00000564752 900 ntTSL 3 BASIC14.77□□□□□ -0.05
CEACAM3P40198 AC099518.3-201ENST00000564808 809 ntAPPRIS P5 TSL 4 BASIC14.77□□□□□ -0.05
CEACAM3P40198 NAA38-203ENST00000575071 553 ntTSL 2 BASIC14.77□□□□□ -0.05
CEACAM3P40198 LITAF-220ENST00000620789 692 ntTSL 5 BASIC14.77□□□□□ -0.05
CEACAM3P40198 AL121956.5-201ENST00000625261 221 ntBASIC14.77□□□□□ -0.05
Retrieved 100 of 98,524 protein–RNA pairs in 31.3 ms