Protein–RNA interactions for Protein: P38936

CDKN1A, Cyclin-dependent kinase inhibitor 1, humanhuman

Predictions only

Length 164 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDKN1AP38936 SMN1-204ENST00000506163 1445 ntAPPRIS ALT2 TSL 1 (best) BASIC15.46■□□□□ 0.07
CDKN1AP38936 EPN3-216ENST00000537145 2223 ntTSL 5 BASIC15.46■□□□□ 0.07
CDKN1AP38936 RNASEH2A-201ENST00000221486 1165 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
CDKN1AP38936 NDUFB9-201ENST00000276689 711 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
CDKN1AP38936 PRMT2-201ENST00000291705 1011 ntTSL 1 (best) BASIC15.46■□□□□ 0.07
CDKN1AP38936 EXOSC4-201ENST00000316052 887 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
CDKN1AP38936 TYMS-202ENST00000323250 693 ntTSL 1 (best) BASIC15.46■□□□□ 0.07
CDKN1AP38936 SUV39H2-202ENST00000354919 1233 ntAPPRIS ALT2 TSL 5 BASIC15.46■□□□□ 0.07
CDKN1AP38936 DNASE1L2-202ENST00000382437 1222 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
CDKN1AP38936 MIR130B-201ENST00000498589 1093 ntTSL 5 BASIC15.46■□□□□ 0.07
CDKN1AP38936 RBM14-RBM4-203ENST00000500635 829 ntTSL 2 BASIC15.46■□□□□ 0.07
CDKN1AP38936 AC008610.1-201ENST00000504573 393 ntTSL 2 BASIC15.46■□□□□ 0.07
CDKN1AP38936 RCHY1-208ENST00000512706 1011 ntTSL 3 BASIC15.46■□□□□ 0.07
CDKN1AP38936 MOK-208ENST00000519058 917 ntTSL 2 BASIC15.46■□□□□ 0.07
CDKN1AP38936 PENK-208ENST00000523051 772 ntTSL 5 BASIC15.46■□□□□ 0.07
CDKN1AP38936 AL162171.1-201ENST00000556328 718 ntTSL 3 BASIC15.46■□□□□ 0.07
CDKN1AP38936 AC084125.4-201ENST00000580385 338 ntTSL 3 BASIC15.46■□□□□ 0.07
CDKN1AP38936 AC087289.1-201ENST00000586808 890 ntTSL 5 BASIC15.46■□□□□ 0.07
CDKN1AP38936 BNIP3P18-201ENST00000593976 575 ntBASIC15.46■□□□□ 0.07
CDKN1AP38936 AL591684.3-201ENST00000605187 298 ntBASIC15.46■□□□□ 0.07
CDKN1AP38936 AC005258.1-201ENST00000621615 1268 ntAPPRIS P1 TSL 2 BASIC15.46■□□□□ 0.07
CDKN1AP38936 EML2-AS1-203ENST00000623430 886 ntTSL 1 (best) BASIC15.46■□□□□ 0.07
CDKN1AP38936 VPS51-217ENST00000639871 243 ntTSL 5 BASIC15.46■□□□□ 0.07
CDKN1AP38936 AC083906.6-201ENST00000641366 219 ntBASIC15.46■□□□□ 0.07
CDKN1AP38936 INF2-204ENST00000398337 1689 ntTSL 1 (best) BASIC15.46■□□□□ 0.07
CDKN1AP38936 SLC35B2-207ENST00000619636 2063 ntTSL 1 (best) BASIC15.46■□□□□ 0.07
CDKN1AP38936 ST3GAL3-201ENST00000262915 2470 ntTSL 5 BASIC15.46■□□□□ 0.07
CDKN1AP38936 PCDHA2-203ENST00000526136 5254 ntAPPRIS P2 TSL 1 (best) BASIC15.46■□□□□ 0.07
CDKN1AP38936 ZC3H12D-201ENST00000409806 5791 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
CDKN1AP38936 BCR-201ENST00000305877 7082 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
CDKN1AP38936 AQP8-201ENST00000219660 1359 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
CDKN1AP38936 PRKAR2A-201ENST00000265563 6471 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
CDKN1AP38936 ALKBH5-203ENST00000541285 1605 ntTSL 1 (best) BASIC15.46■□□□□ 0.06
CDKN1AP38936 CMIP-209ENST00000566513 2288 ntTSL 5 BASIC15.46■□□□□ 0.06
CDKN1AP38936 VIPR2-202ENST00000377633 1491 ntTSL 2 BASIC15.46■□□□□ 0.06
CDKN1AP38936 C6orf141-206ENST00000529246 1450 ntAPPRIS P1 BASIC15.46■□□□□ 0.06
CDKN1AP38936 MPZ-206ENST00000533357 1955 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
CDKN1AP38936 PTBP1-220ENST00000627714 2201 ntTSL 5 BASIC15.45■□□□□ 0.06
CDKN1AP38936 IFFO1-212ENST00000619571 2724 ntTSL 2 BASIC15.45■□□□□ 0.06
CDKN1AP38936 IL1R1-205ENST00000410023 5143 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
CDKN1AP38936 FAM160A2-201ENST00000265978 3481 ntAPPRIS P3 TSL 1 (best) BASIC15.45■□□□□ 0.06
CDKN1AP38936 HLA-A-201ENST00000376802 1334 ntBASIC15.45■□□□□ 0.06
CDKN1AP38936 SDR39U1-206ENST00000553930 1325 ntTSL 5 BASIC15.45■□□□□ 0.06
CDKN1AP38936 PKP3-201ENST00000331563 2809 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
CDKN1AP38936 CDC42EP1-201ENST00000249014 2181 ntAPPRIS P2 TSL 1 (best) BASIC15.45■□□□□ 0.06
CDKN1AP38936 C16orf59-210ENST00000569496 1911 ntAPPRIS ALT2 TSL 5 BASIC15.45■□□□□ 0.06
CDKN1AP38936 KCNC4-203ENST00000413138 3018 ntAPPRIS ALT2 TSL 5 BASIC15.45■□□□□ 0.06
CDKN1AP38936 KAT2A-201ENST00000225916 3109 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
CDKN1AP38936 KBTBD2-201ENST00000304056 3745 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
CDKN1AP38936 RSPH14-201ENST00000216036 1291 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
CDKN1AP38936 FCN3-201ENST00000270879 1030 ntAPPRIS P4 TSL 1 (best) BASIC15.45■□□□□ 0.06
CDKN1AP38936 PNOC-201ENST00000301908 1200 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
CDKN1AP38936 FCN3-202ENST00000354982 997 ntAPPRIS ALT2 TSL 1 (best) BASIC15.45■□□□□ 0.06
CDKN1AP38936 S100A3-201ENST00000368712 579 ntAPPRIS P1 TSL 3 BASIC15.45■□□□□ 0.06
CDKN1AP38936 DUSP15-204ENST00000398083 1212 ntTSL 5 BASIC15.45■□□□□ 0.06
CDKN1AP38936 AC007952.1-201ENST00000399087 553 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
CDKN1AP38936 AC007952.2-202ENST00000399093 556 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
CDKN1AP38936 LEF1-AS1-201ENST00000436413 1045 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
CDKN1AP38936 CMPK1-205ENST00000471289 816 ntTSL 2 BASIC15.45■□□□□ 0.06
CDKN1AP38936 COX18-204ENST00000507544 1086 ntAPPRIS ALT1 TSL 1 (best) BASIC15.45■□□□□ 0.06
CDKN1AP38936 ATP5G2-204ENST00000549164 745 ntAPPRIS P1 TSL 3 BASIC15.45■□□□□ 0.06
CDKN1AP38936 KRT8-216ENST00000552551 2126 ntAPPRIS P1 TSL 2 BASIC15.45■□□□□ 0.06
CDKN1AP38936 AC016590.1-204ENST00000586442 813 ntTSL 5 BASIC15.45■□□□□ 0.06
CDKN1AP38936 ATP5G2-209ENST00000602871 668 ntAPPRIS P1 TSL 2 BASIC15.45■□□□□ 0.06
CDKN1AP38936 TST-204ENST00000622841 1105 ntAPPRIS P1 TSL 5 BASIC15.45■□□□□ 0.06
CDKN1AP38936 TP73-AS1-207ENST00000624167 988 ntBASIC15.45■□□□□ 0.06
CDKN1AP38936 AC106017.2-202ENST00000628484 536 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
CDKN1AP38936 LINC02381-201ENST00000508564 1369 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
CDKN1AP38936 P2RY6-201ENST00000349767 1700 ntAPPRIS P1 TSL 2 BASIC15.45■□□□□ 0.06
CDKN1AP38936 CLDN6-202ENST00000396925 1739 ntAPPRIS P1 TSL 5 BASIC15.45■□□□□ 0.06
CDKN1AP38936 PTPA-206ENST00000358994 2664 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
CDKN1AP38936 SYN2-206ENST00000621198 2674 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
CDKN1AP38936 KCTD2-201ENST00000322444 3635 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
CDKN1AP38936 SNAI3-AS1-205ENST00000568633 2096 ntBASIC15.45■□□□□ 0.06
CDKN1AP38936 FBLN1-201ENST00000262722 2251 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
CDKN1AP38936 MAPK9-207ENST00000452135 4815 ntAPPRIS P5 TSL 5 BASIC15.45■□□□□ 0.06
CDKN1AP38936 ANKS1A-201ENST00000360359 6347 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
CDKN1AP38936 CCDC3-201ENST00000378825 2731 ntAPPRIS P3 TSL 1 (best) BASIC15.45■□□□□ 0.06
CDKN1AP38936 RNPS1-219ENST00000566397 1685 ntTSL 2 BASIC15.44■□□□□ 0.06
CDKN1AP38936 CWH43-201ENST00000226432 2472 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
CDKN1AP38936 LRWD1-201ENST00000292616 2215 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
CDKN1AP38936 PAQR4-202ENST00000318782 2793 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
CDKN1AP38936 IQGAP2-201ENST00000274364 5844 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
CDKN1AP38936 TMEM106C-202ENST00000429772 1515 ntAPPRIS P1 TSL 2 BASIC15.44■□□□□ 0.06
CDKN1AP38936 ACADS-201ENST00000242592 1950 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
CDKN1AP38936 CNNM3-202ENST00000377060 3308 ntTSL 2 BASIC15.44■□□□□ 0.06
CDKN1AP38936 SMPD3-203ENST00000563226 2093 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
CDKN1AP38936 PTPRJ-207ENST00000613246 7851 ntAPPRIS ALT2 TSL 5 BASIC15.44■□□□□ 0.06
CDKN1AP38936 MEPCE-202ENST00000414441 2261 ntTSL 2 BASIC15.44■□□□□ 0.06
CDKN1AP38936 MRPS34-201ENST00000177742 1040 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
CDKN1AP38936 HINT1-201ENST00000304043 1081 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
CDKN1AP38936 DDT-202ENST00000398344 713 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
CDKN1AP38936 DDT-203ENST00000403754 569 ntTSL 3 BASIC15.44■□□□□ 0.06
CDKN1AP38936 POM121L3P-201ENST00000419331 1163 ntBASIC15.44■□□□□ 0.06
CDKN1AP38936 DDT-206ENST00000430101 573 ntTSL 2 BASIC15.44■□□□□ 0.06
CDKN1AP38936 FIGNL1-207ENST00000435566 593 ntTSL 4 BASIC15.44■□□□□ 0.06
CDKN1AP38936 THAP5-204ENST00000438865 868 ntTSL 2 BASIC15.44■□□□□ 0.06
CDKN1AP38936 SMN1-203ENST00000503079 1219 ntTSL 5 BASIC15.44■□□□□ 0.06
CDKN1AP38936 ATPAF2-213ENST00000585101 566 ntTSL 4 BASIC15.44■□□□□ 0.06
CDKN1AP38936 AC004130.1-202ENST00000603156 666 ntTSL 2 BASIC15.44■□□□□ 0.06
Retrieved 100 of 98,524 protein–RNA pairs in 40.2 ms