Protein–RNA interactions for Protein: P35900

KRT20, Keratin, type I cytoskeletal 20, humanhuman

Predictions only

Length 424 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRT20P35900 AC005363.2-201ENST00000618631 242 ntBASIC17.26■□□□□ 0.35
KRT20P35900 MYC-208ENST00000641036 567 ntBASIC17.26■□□□□ 0.35
KRT20P35900 MAGI1-213ENST00000483466 4791 ntAPPRIS P3 TSL 1 (best) BASIC17.26■□□□□ 0.35
KRT20P35900 NOMO2-202ENST00000381474 3911 ntAPPRIS ALT2 TSL 5 BASIC17.26■□□□□ 0.35
KRT20P35900 PTEN-201ENST00000371953 9027 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
KRT20P35900 SMPD1-203ENST00000527275 2188 ntAPPRIS P3 TSL 2 BASIC17.26■□□□□ 0.35
KRT20P35900 DDX17-211ENST00000640332 2190 ntAPPRIS P3 TSL 1 (best) BASIC17.26■□□□□ 0.35
KRT20P35900 DDX17-212ENST00000640668 2196 ntAPPRIS ALT2 TSL 1 (best) BASIC17.26■□□□□ 0.35
KRT20P35900 RTKN-203ENST00000305557 2646 ntAPPRIS P3 TSL 5 BASIC17.26■□□□□ 0.35
KRT20P35900 KCNMA1-261ENST00000639486 8850 ntAPPRIS ALT2 TSL 5 BASIC17.26■□□□□ 0.35
KRT20P35900 SNHG10-201ENST00000500370 1531 ntTSL 2 BASIC17.26■□□□□ 0.35
KRT20P35900 SETMAR-206ENST00000430981 1671 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
KRT20P35900 XYLT2-203ENST00000507602 2107 ntTSL 2 BASIC17.26■□□□□ 0.35
KRT20P35900 KHNYN-206ENST00000556842 2443 ntAPPRIS P1 TSL 2 BASIC17.26■□□□□ 0.35
KRT20P35900 CMPK2-201ENST00000256722 2884 ntAPPRIS P3 TSL 1 (best) BASIC17.26■□□□□ 0.35
KRT20P35900 CIZ1-226ENST00000629610 2855 ntAPPRIS ALT2 TSL 2 BASIC17.26■□□□□ 0.35
KRT20P35900 P2RY6-202ENST00000393590 2398 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
KRT20P35900 PMAIP1-202ENST00000316660 1948 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
KRT20P35900 HOXB1-201ENST00000239174 2020 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
KRT20P35900 AC036111.1-201ENST00000533973 1582 ntBASIC17.25■□□□□ 0.35
KRT20P35900 ZNF22-201ENST00000298299 2551 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
KRT20P35900 CHCHD6-201ENST00000290913 1006 ntAPPRIS P2 TSL 1 (best) BASIC17.25■□□□□ 0.35
KRT20P35900 CPZ-201ENST00000315782 2136 ntAPPRIS P3 TSL 1 (best) BASIC17.25■□□□□ 0.35
KRT20P35900 INGX-201ENST00000359239 846 ntBASIC17.25■□□□□ 0.35
KRT20P35900 HPF1-201ENST00000393381 1230 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
KRT20P35900 PMEPA1-204ENST00000395814 800 ntTSL 3 BASIC17.25■□□□□ 0.35
KRT20P35900 AC211429.1-201ENST00000415277 523 ntBASIC17.25■□□□□ 0.35
KRT20P35900 CBLN1-202ENST00000536749 718 ntAPPRIS P1 TSL 5 BASIC17.25■□□□□ 0.35
KRT20P35900 FAM87A-204ENST00000613235 858 ntBASIC17.25■□□□□ 0.35
KRT20P35900 FP565260.3-205ENST00000620481 816 ntTSL 5 BASIC17.25■□□□□ 0.35
KRT20P35900 TRAPPC6A-201ENST00000006275 805 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
KRT20P35900 C6orf118-201ENST00000230301 1812 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
KRT20P35900 IRF7-202ENST00000348655 1801 ntAPPRIS ALT2 TSL 1 (best) BASIC17.25■□□□□ 0.35
KRT20P35900 GPC2-201ENST00000292377 2532 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
KRT20P35900 LMNA-207ENST00000368301 2461 ntTSL 2 BASIC17.25■□□□□ 0.35
KRT20P35900 AHRR-209ENST00000512529 1912 ntTSL 5 BASIC17.25■□□□□ 0.35
KRT20P35900 MFSD11-220ENST00000621483 2850 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
KRT20P35900 CD40-201ENST00000372276 1623 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
KRT20P35900 ZFP91-201ENST00000316059 5220 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
KRT20P35900 TCP11-228ENST00000611141 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC17.24■□□□□ 0.35
KRT20P35900 BIRC7-202ENST00000342412 1302 ntAPPRIS ALT2 TSL 1 (best) BASIC17.24■□□□□ 0.35
KRT20P35900 CUTC-202ENST00000370476 1346 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
KRT20P35900 PCDHA8-201ENST00000378123 2616 ntAPPRIS ALT2 BASIC17.24■□□□□ 0.35
KRT20P35900 CROCCP3-201ENST00000263511 5368 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
KRT20P35900 TFAP4-201ENST00000204517 2215 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
KRT20P35900 CCDC137-201ENST00000329214 2468 ntAPPRIS P2 TSL 1 (best) BASIC17.24■□□□□ 0.35
KRT20P35900 UCHL5-206ENST00000367455 5327 ntAPPRIS P3 TSL 1 (best) BASIC17.24■□□□□ 0.35
KRT20P35900 TYMS-203ENST00000323274 1662 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
KRT20P35900 ILK-203ENST00000420936 1692 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
KRT20P35900 NAPRT-202ENST00000426292 1654 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
KRT20P35900 MPG-201ENST00000219431 1193 ntAPPRIS P4 TSL 3 BASIC17.24■□□□□ 0.35
KRT20P35900 APCDD1-201ENST00000355285 3809 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
KRT20P35900 SLC25A3P1-201ENST00000443844 931 ntBASIC17.24■□□□□ 0.35
KRT20P35900 AC108025.1-201ENST00000453678 1058 ntTSL 5 BASIC17.24■□□□□ 0.35
KRT20P35900 ABHD14B-208ENST00000525795 980 ntAPPRIS P1 TSL 3 BASIC17.24■□□□□ 0.35
KRT20P35900 DUT-205ENST00000558813 769 ntTSL 2 BASIC17.24■□□□□ 0.35
KRT20P35900 MIR4674-201ENST00000582457 87 ntBASIC17.24■□□□□ 0.35
KRT20P35900 TPSB2-201ENST00000606293 1165 ntAPPRIS ALT2 TSL 1 (best) BASIC17.24■□□□□ 0.35
KRT20P35900 GPSM2-201ENST00000264126 3032 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
KRT20P35900 ISG20-201ENST00000306072 1856 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
KRT20P35900 PTN-201ENST00000348225 1614 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
KRT20P35900 GGPS1-206ENST00000488594 1396 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
KRT20P35900 ULK3-220ENST00000569437 2611 ntAPPRIS ALT1 TSL 1 (best) BASIC17.24■□□□□ 0.35
KRT20P35900 LINC00896-202ENST00000609602 2128 ntBASIC17.24■□□□□ 0.35
KRT20P35900 AC116565.2-201ENST00000637674 1854 ntTSL 2 BASIC17.24■□□□□ 0.35
KRT20P35900 HECTD2-204ENST00000446394 4939 ntTSL 2 BASIC17.24■□□□□ 0.35
KRT20P35900 NR1H2-202ENST00000411902 1466 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
KRT20P35900 RIC8A-208ENST00000527696 2565 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
KRT20P35900 ARSA-201ENST00000216124 2050 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
KRT20P35900 SPERT-202ENST00000378966 1842 ntAPPRIS ALT2 TSL 1 (best) BASIC17.24■□□□□ 0.35
KRT20P35900 KLC1-217ENST00000554280 2426 ntTSL 5 BASIC17.23■□□□□ 0.35
KRT20P35900 ATP6V1G2-205ENST00000303892 1588 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
KRT20P35900 PDLIM7-203ENST00000359895 1567 ntAPPRIS ALT2 TSL 1 (best) BASIC17.23■□□□□ 0.35
KRT20P35900 GABRB3-202ENST00000311550 5781 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
KRT20P35900 THOC3-212ENST00000628318 1442 ntTSL 5 BASIC17.23■□□□□ 0.35
KRT20P35900 CHRM4-201ENST00000433765 1511 ntAPPRIS P1 BASIC17.23■□□□□ 0.35
KRT20P35900 RECK-201ENST00000377966 4888 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
KRT20P35900 BUD23-201ENST00000265758 1230 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
KRT20P35900 AP000523.1-201ENST00000398242 1049 ntBASIC17.23■□□□□ 0.35
KRT20P35900 HOXD12-201ENST00000404162 841 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
KRT20P35900 ELP6-205ENST00000439305 880 ntTSL 2 BASIC17.23■□□□□ 0.35
KRT20P35900 SLC39A11-207ENST00000579732 1004 ntTSL 2 BASIC17.23■□□□□ 0.35
KRT20P35900 RABAC1-210ENST00000601891 628 ntTSL 3 BASIC17.23■□□□□ 0.35
KRT20P35900 CR769767.2-201ENST00000622735 460 ntBASIC17.23■□□□□ 0.35
KRT20P35900 NLGN2-201ENST00000302926 4642 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
KRT20P35900 MAPK11-201ENST00000330651 2431 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
KRT20P35900 FHL1-205ENST00000370690 2441 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
KRT20P35900 VKORC1L1-201ENST00000360768 5899 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
KRT20P35900 GNA13-201ENST00000439174 4922 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
KRT20P35900 AL357033.4-201ENST00000617703 1807 ntBASIC17.23■□□□□ 0.35
KRT20P35900 CROCCP1-201ENST00000426910 5675 ntBASIC17.23■□□□□ 0.35
KRT20P35900 ZNF420-201ENST00000304239 1945 ntTSL 2 BASIC17.23■□□□□ 0.35
KRT20P35900 C5orf30-203ENST00000515669 1573 ntAPPRIS P1 TSL 3 BASIC17.23■□□□□ 0.35
KRT20P35900 NFYC-AS1-201ENST00000606277 1687 ntBASIC17.23■□□□□ 0.35
KRT20P35900 CIRBP-201ENST00000320936 1328 ntAPPRIS P3 TSL 1 (best) BASIC17.22■□□□□ 0.35
KRT20P35900 PPP4C-202ENST00000561610 1333 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
KRT20P35900 CIRBP-207ENST00000586472 1303 ntAPPRIS P3 TSL 3 BASIC17.22■□□□□ 0.35
KRT20P35900 FST-202ENST00000396947 2538 ntTSL 5 BASIC17.22■□□□□ 0.35
KRT20P35900 TSPYL5-201ENST00000322128 4491 ntAPPRIS P1 BASIC17.22■□□□□ 0.35
KRT20P35900 MTMR9LP-203ENST00000426597 1545 ntBASIC17.22■□□□□ 0.35
Retrieved 100 of 98,524 protein–RNA pairs in 29.2 ms