Protein–RNA interactions for Protein: P35221

CTNNA1, Catenin alpha-1, humanhuman

Known RBP Predictions only

Length 906 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNA1P35221 ARHGAP22-205ENST00000417912 2352 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
CTNNA1P35221 NEU1-206ENST00000375631 2045 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
CTNNA1P35221 GAB3-203ENST00000424127 2028 ntAPPRIS ALT2 TSL 1 (best) BASIC19.16■□□□□ 0.66
CTNNA1P35221 C16orf45-201ENST00000300006 2404 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
CTNNA1P35221 FOLH1-204ENST00000356696 2403 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
CTNNA1P35221 SNX14-210ENST00000505648 3193 ntTSL 2 BASIC19.16■□□□□ 0.66
CTNNA1P35221 GLIS1-201ENST00000312233 2812 ntAPPRIS P2 TSL 2 BASIC19.16■□□□□ 0.66
CTNNA1P35221 GYPC-202ENST00000356887 2067 ntAPPRIS ALT2 TSL 1 (best) BASIC19.16■□□□□ 0.66
CTNNA1P35221 CLDN9-201ENST00000445369 2050 ntAPPRIS P1 BASIC19.16■□□□□ 0.66
CTNNA1P35221 MME-217ENST00000616757 1315 ntTSL 5 BASIC19.16■□□□□ 0.66
CTNNA1P35221 SH2D3C-213ENST00000629203 2478 ntTSL 2 BASIC19.16■□□□□ 0.66
CTNNA1P35221 CD19-206ENST00000567541 1707 ntAPPRIS ALT2 TSL 1 (best) BASIC19.16■□□□□ 0.66
CTNNA1P35221 ACVRL1-202ENST00000419526 1356 ntTSL 2 BASIC19.16■□□□□ 0.66
CTNNA1P35221 AL512380.2-201ENST00000637901 1780 ntTSL 5 BASIC19.16■□□□□ 0.66
CTNNA1P35221 BPIFB4-201ENST00000375483 2159 ntAPPRIS P1 TSL 5 BASIC19.16■□□□□ 0.66
CTNNA1P35221 CFAP46-201ENST00000368585 1825 ntAPPRIS ALT2 TSL 2 BASIC19.16■□□□□ 0.66
CTNNA1P35221 AC012317.2-201ENST00000623305 2251 ntBASIC19.16■□□□□ 0.66
CTNNA1P35221 DLGAP1-222ENST00000639615 1898 ntTSL 5 BASIC19.16■□□□□ 0.66
CTNNA1P35221 WNT5B-202ENST00000397196 2303 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
CTNNA1P35221 SP100-208ENST00000427101 1922 ntTSL 2 BASIC19.15■□□□□ 0.66
CTNNA1P35221 SQOR-201ENST00000260324 2003 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
CTNNA1P35221 PRR29-AS1-202ENST00000580942 2926 ntTSL 2 BASIC19.15■□□□□ 0.66
CTNNA1P35221 TLE2-219ENST00000591529 2483 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
CTNNA1P35221 PHKA1-201ENST00000339490 6121 ntAPPRIS ALT1 TSL 1 (best) BASIC19.15■□□□□ 0.66
CTNNA1P35221 MRI1-201ENST00000040663 1735 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
CTNNA1P35221 CAMK2B-204ENST00000350811 2292 ntAPPRIS P4 TSL 2 BASIC19.15■□□□□ 0.66
CTNNA1P35221 ACVR1C-203ENST00000348328 1270 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
CTNNA1P35221 TSPY17P-201ENST00000450329 467 ntBASIC19.15■□□□□ 0.66
CTNNA1P35221 AL354712.1-201ENST00000563570 477 ntTSL 3 BASIC19.15■□□□□ 0.66
CTNNA1P35221 MNT-208ENST00000575394 606 ntTSL 4 BASIC19.15■□□□□ 0.66
CTNNA1P35221 ARHGDIA-207ENST00000580685 1201 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
CTNNA1P35221 Z99916.2-201ENST00000604037 246 ntBASIC19.15■□□□□ 0.66
CTNNA1P35221 SLC2A5-201ENST00000377414 2344 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
CTNNA1P35221 TJP3-201ENST00000539908 2897 ntAPPRIS ALT2 TSL 2 BASIC19.15■□□□□ 0.66
CTNNA1P35221 SEPHS1-202ENST00000378614 2387 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
CTNNA1P35221 DKK3-203ENST00000525493 1326 ntTSL 2 BASIC19.15■□□□□ 0.66
CTNNA1P35221 WBP2-219ENST00000626827 1867 ntTSL 5 BASIC19.15■□□□□ 0.66
CTNNA1P35221 SWAP70-202ENST00000447399 3538 ntTSL 2 BASIC19.15■□□□□ 0.66
CTNNA1P35221 ANKRD23-202ENST00000331001 2455 ntTSL 2 BASIC19.15■□□□□ 0.66
CTNNA1P35221 ACTG1-201ENST00000331925 1994 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
CTNNA1P35221 HDAC10-202ENST00000349505 1950 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
CTNNA1P35221 GOLGA7-204ENST00000520817 1984 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
CTNNA1P35221 TMEM110-MUSTN1-202ENST00000504329 1405 ntAPPRIS P1 TSL 5 BASIC19.15■□□□□ 0.66
CTNNA1P35221 PCDHA12-202ENST00000613593 2588 ntBASIC19.15■□□□□ 0.66
CTNNA1P35221 PNKP-224ENST00000631020 1545 ntTSL 5 BASIC19.15■□□□□ 0.66
CTNNA1P35221 TRAM1-201ENST00000262213 2785 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
CTNNA1P35221 FXYD6-204ENST00000526014 2171 ntAPPRIS P2 TSL 1 (best) BASIC19.15■□□□□ 0.66
CTNNA1P35221 ARHGEF28-212ENST00000513042 6273 ntAPPRIS ALT2 TSL 5 BASIC19.14■□□□□ 0.66
CTNNA1P35221 MEPCE-201ENST00000310512 3030 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.66
CTNNA1P35221 SLC6A17-201ENST00000331565 6427 ntAPPRIS P1 TSL 2 BASIC19.14■□□□□ 0.66
CTNNA1P35221 MTMR14-203ENST00000353332 2368 ntAPPRIS ALT2 TSL 1 (best) BASIC19.14■□□□□ 0.66
CTNNA1P35221 LINC00957-202ENST00000441052 2590 ntTSL 2 BASIC19.14■□□□□ 0.65
CTNNA1P35221 EXO5-202ENST00000358527 1892 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
CTNNA1P35221 CTSB-232ENST00000534510 1989 ntAPPRIS P1 TSL 5 BASIC19.14■□□□□ 0.65
CTNNA1P35221 NADSYN1-201ENST00000319023 2773 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
CTNNA1P35221 TMIGD2-201ENST00000301272 1262 ntAPPRIS P3 TSL 1 (best) BASIC19.14■□□□□ 0.65
CTNNA1P35221 KRT17P2-202ENST00000326333 1174 ntTSL 2 BASIC19.14■□□□□ 0.65
CTNNA1P35221 ILF2-202ENST00000368681 726 ntTSL 2 BASIC19.14■□□□□ 0.65
CTNNA1P35221 ID1-202ENST00000376112 994 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
CTNNA1P35221 SATB2-203ENST00000428695 2135 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
CTNNA1P35221 RBM17P1-201ENST00000453646 1190 ntBASIC19.14■□□□□ 0.65
CTNNA1P35221 BCL7B-206ENST00000455335 985 ntTSL 3 BASIC19.14■□□□□ 0.65
CTNNA1P35221 PAIP2-208ENST00000511706 468 ntTSL 5 BASIC19.14■□□□□ 0.65
CTNNA1P35221 AC004448.5-201ENST00000579897 567 ntTSL 5 BASIC19.14■□□□□ 0.65
CTNNA1P35221 ATP5D-207ENST00000591660 637 ntAPPRIS P1 TSL 3 BASIC19.14■□□□□ 0.65
CTNNA1P35221 AC016737.2-201ENST00000609273 358 ntTSL 3 BASIC19.14■□□□□ 0.65
CTNNA1P35221 CALM2-201ENST00000272298 1302 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
CTNNA1P35221 APIP-201ENST00000395787 1366 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
CTNNA1P35221 AC092338.2-201ENST00000568827 1415 ntBASIC19.14■□□□□ 0.65
CTNNA1P35221 GHDC-202ENST00000414034 2496 ntTSL 2 BASIC19.14■□□□□ 0.65
CTNNA1P35221 AGAP2-AS1-201ENST00000542466 1500 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
CTNNA1P35221 LBX1-AS1-201ENST00000430651 2553 ntTSL 2 BASIC19.14■□□□□ 0.65
CTNNA1P35221 VASH1-201ENST00000167106 5728 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
CTNNA1P35221 DLK2-203ENST00000372488 1590 ntAPPRIS P3 TSL 1 (best) BASIC19.14■□□□□ 0.65
CTNNA1P35221 IRF3-203ENST00000377139 1613 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
CTNNA1P35221 NDUFS7-210ENST00000539480 1743 ntTSL 2 BASIC19.14■□□□□ 0.65
CTNNA1P35221 PDE9A-206ENST00000380328 1875 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
CTNNA1P35221 ATP6AP2-214ENST00000636287 1904 ntAPPRIS ALT2 TSL 5 BASIC19.13■□□□□ 0.65
CTNNA1P35221 CBS-201ENST00000352178 2583 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
CTNNA1P35221 KCNT1-202ENST00000371757 4717 ntAPPRIS P3 TSL 1 (best) BASIC19.13■□□□□ 0.65
CTNNA1P35221 TRIM9-201ENST00000298355 5284 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
CTNNA1P35221 FUOM-201ENST00000278025 709 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
CTNNA1P35221 UNC93B2-201ENST00000285383 730 ntBASIC19.13■□□□□ 0.65
CTNNA1P35221 NKAIN4-201ENST00000370307 793 ntTSL 5 BASIC19.13■□□□□ 0.65
CTNNA1P35221 CCDC107-202ENST00000378406 1016 ntAPPRIS ALT2 TSL 2 BASIC19.13■□□□□ 0.65
CTNNA1P35221 TMSB4X-201ENST00000380633 495 ntAPPRIS P1 TSL 3 BASIC19.13■□□□□ 0.65
CTNNA1P35221 AL390728.5-201ENST00000428687 706 ntTSL 3 BASIC19.13■□□□□ 0.65
CTNNA1P35221 AP006621.4-201ENST00000527021 532 ntTSL 5 BASIC19.13■□□□□ 0.65
CTNNA1P35221 KLHL21-202ENST00000377663 6445 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
CTNNA1P35221 SLC35E2-201ENST00000246421 1430 ntAPPRIS P3 TSL 1 (best) BASIC19.13■□□□□ 0.65
CTNNA1P35221 MDFIC-201ENST00000257724 4598 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
CTNNA1P35221 GAS7-210ENST00000579158 1528 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
CTNNA1P35221 LINC01126-201ENST00000623515 1646 ntBASIC19.13■□□□□ 0.65
CTNNA1P35221 SIGLEC6-203ENST00000359982 1811 ntAPPRIS ALT2 TSL 2 BASIC19.13■□□□□ 0.65
CTNNA1P35221 NFATC1-206ENST00000542384 2142 ntAPPRIS ALT2 TSL 1 (best) BASIC19.13■□□□□ 0.65
CTNNA1P35221 CLPB-212ENST00000543042 2133 ntTSL 2 BASIC19.13■□□□□ 0.65
CTNNA1P35221 ELN-202ENST00000320399 2274 ntAPPRIS ALT2 TSL 5 BASIC19.13■□□□□ 0.65
CTNNA1P35221 FGFR4-202ENST00000393637 2418 ntAPPRIS ALT2 TSL 1 (best) BASIC19.13■□□□□ 0.65
CTNNA1P35221 MOGS-205ENST00000452063 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC19.13■□□□□ 0.65
CTNNA1P35221 TCIRG1-201ENST00000265686 2677 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Retrieved 100 of 98,524 protein–RNA pairs in 43.1 ms