Protein–RNA interactions for Protein: P25067

COL8A2, Collagen alpha-2(VIII) chain, humanhuman

Predictions only

Length 703 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL8A2P25067 CADPS-201ENST00000283269 4591 ntAPPRIS P4 TSL 1 (best) BASIC15.29■□□□□ 0.04
COL8A2P25067 RTEL1-204ENST00000370003 2273 ntTSL 2 BASIC15.29■□□□□ 0.04
COL8A2P25067 AC135782.1-201ENST00000537498 2154 ntTSL 2 BASIC15.29■□□□□ 0.04
COL8A2P25067 CCDC34-201ENST00000317945 2109 ntAPPRIS P3 TSL 1 (best) BASIC15.29■□□□□ 0.04
COL8A2P25067 ENOPH1-201ENST00000273920 2025 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
COL8A2P25067 TMPRSS5-205ENST00000538955 1956 ntAPPRIS ALT2 TSL 1 (best) BASIC15.29■□□□□ 0.04
COL8A2P25067 AC027097.1-202ENST00000592201 1954 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
COL8A2P25067 RASSF1-210ENST00000616212 1842 ntTSL 2 BASIC15.29■□□□□ 0.04
COL8A2P25067 RAD51-203ENST00000423169 1611 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
COL8A2P25067 MRM2-203ENST00000440306 1570 ntAPPRIS P1 TSL 5 BASIC15.29■□□□□ 0.04
COL8A2P25067 IFNLR1-205ENST00000374421 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC15.29■□□□□ 0.04
COL8A2P25067 ABHD14B-204ENST00000461108 1397 ntTSL 2 BASIC15.29■□□□□ 0.04
COL8A2P25067 EHMT1-204ENST00000462484 2707 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
COL8A2P25067 PSCA-201ENST00000301258 1020 ntAPPRIS P2 TSL 1 (best) BASIC15.29■□□□□ 0.04
COL8A2P25067 GYG2P1-201ENST00000357871 623 ntTSL 3 BASIC15.29■□□□□ 0.04
COL8A2P25067 ITM2C-204ENST00000409704 1106 ntTSL 5 BASIC15.29■□□□□ 0.04
COL8A2P25067 TSPY12P-201ENST00000421279 868 ntBASIC15.29■□□□□ 0.04
COL8A2P25067 IGHV3-47-201ENST00000425060 335 ntBASIC15.29■□□□□ 0.04
COL8A2P25067 AP005717.1-202ENST00000523563 419 ntTSL 3 BASIC15.29■□□□□ 0.04
COL8A2P25067 CCDC61-201ENST00000536603 1282 ntAPPRIS ALT2 TSL 1 (best) BASIC15.29■□□□□ 0.04
COL8A2P25067 AC092338.2-202ENST00000567158 611 ntTSL 5 BASIC15.29■□□□□ 0.04
COL8A2P25067 AP005901.3-202ENST00000581653 237 ntBASIC15.29■□□□□ 0.04
COL8A2P25067 SRSF1-209ENST00000585096 568 ntTSL 4 BASIC15.29■□□□□ 0.04
COL8A2P25067 AC104971.2-201ENST00000588144 1209 ntTSL 2 BASIC15.29■□□□□ 0.04
COL8A2P25067 AL732292.2-201ENST00000609649 430 ntBASIC15.29■□□□□ 0.04
COL8A2P25067 AL691432.3-201ENST00000621860 400 ntBASIC15.29■□□□□ 0.04
COL8A2P25067 PDLIM4-201ENST00000253754 2282 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
COL8A2P25067 COQ10B-201ENST00000263960 2239 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
COL8A2P25067 SLC6A9-201ENST00000357730 2168 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
COL8A2P25067 PSMD11-202ENST00000457654 2159 ntAPPRIS P1 TSL 2 BASIC15.29■□□□□ 0.04
COL8A2P25067 KDM5C-203ENST00000375383 5122 ntAPPRIS ALT2 TSL 5 BASIC15.29■□□□□ 0.04
COL8A2P25067 AMDHD2-203ENST00000413459 2049 ntTSL 2 BASIC15.29■□□□□ 0.04
COL8A2P25067 AC018755.2-202ENST00000429354 1926 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
COL8A2P25067 WNK1-203ENST00000447667 1902 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
COL8A2P25067 GTF2IRD2-207ENST00000625377 1910 ntTSL 5 BASIC15.29■□□□□ 0.04
COL8A2P25067 SH3BP1-201ENST00000357436 2852 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
COL8A2P25067 PCDH1-201ENST00000287008 4793 ntAPPRIS P3 TSL 5 BASIC15.29■□□□□ 0.04
COL8A2P25067 AP001351.1-201ENST00000501397 1865 ntTSL 2 BASIC15.29■□□□□ 0.04
COL8A2P25067 GCDH-216ENST00000591470 1867 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
COL8A2P25067 NBPF9-209ENST00000621645 5632 ntAPPRIS ALT2 TSL 2 BASIC15.29■□□□□ 0.04
COL8A2P25067 TBXAS1-204ENST00000416849 2505 ntTSL 5 BASIC15.28■□□□□ 0.04
COL8A2P25067 ENOPH1-202ENST00000505846 1689 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
COL8A2P25067 AC008878.3-201ENST00000617428 4964 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
COL8A2P25067 STX3-201ENST00000337979 3299 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
COL8A2P25067 USP49-202ENST00000373010 2446 ntTSL 5 BASIC15.28■□□□□ 0.04
COL8A2P25067 ARPC1B-201ENST00000252725 1551 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
COL8A2P25067 ULK2-201ENST00000361658 3908 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
COL8A2P25067 AR-207ENST00000612010 3896 ntTSL 5 BASIC15.28■□□□□ 0.04
COL8A2P25067 LRP3-201ENST00000253193 3807 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
COL8A2P25067 LUC7L-221ENST00000629543 1520 ntTSL 5 BASIC15.28■□□□□ 0.04
COL8A2P25067 FAM213A-206ENST00000615554 2213 ntAPPRIS P1 TSL 5 BASIC15.28■□□□□ 0.04
COL8A2P25067 SKOR1-203ENST00000554054 3620 ntAPPRIS ALT2 TSL 5 BASIC15.28■□□□□ 0.04
COL8A2P25067 LRRC27-203ENST00000368613 2113 ntAPPRIS P3 TSL 1 (best) BASIC15.28■□□□□ 0.04
COL8A2P25067 PAQR4-202ENST00000318782 2793 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
COL8A2P25067 NAA50-209ENST00000497525 1385 ntTSL 2 BASIC15.28■□□□□ 0.04
COL8A2P25067 PIF1-205ENST00000559239 2677 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
COL8A2P25067 C6orf15-201ENST00000259870 1140 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
COL8A2P25067 MRPL43-203ENST00000318364 1010 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
COL8A2P25067 MRPL43-204ENST00000342071 894 ntTSL 5 BASIC15.28■□□□□ 0.04
COL8A2P25067 MUC1-204ENST00000343256 648 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
COL8A2P25067 AL645608.6-201ENST00000418300 402 ntTSL 3 BASIC15.28■□□□□ 0.04
COL8A2P25067 TSPY19P-201ENST00000418461 509 ntBASIC15.28■□□□□ 0.04
COL8A2P25067 AL845331.1-201ENST00000424978 1190 ntBASIC15.28■□□□□ 0.04
COL8A2P25067 TSPY18P-201ENST00000441642 509 ntBASIC15.28■□□□□ 0.04
COL8A2P25067 RBM14-RBM4-203ENST00000500635 829 ntTSL 2 BASIC15.28■□□□□ 0.04
COL8A2P25067 AC091304.2-201ENST00000564639 760 ntBASIC15.28■□□□□ 0.04
COL8A2P25067 RNPS1-224ENST00000569598 918 ntTSL 5 BASIC15.28■□□□□ 0.04
COL8A2P25067 RN7SL510P-201ENST00000581311 263 ntBASIC15.28■□□□□ 0.04
COL8A2P25067 AC099336.1-202ENST00000602961 463 ntBASIC15.28■□□□□ 0.04
COL8A2P25067 AL121772.3-201ENST00000610840 674 ntBASIC15.28■□□□□ 0.04
COL8A2P25067 GXYLT1P4-201ENST00000613576 1192 ntBASIC15.28■□□□□ 0.04
COL8A2P25067 SPINK2-205ENST00000616980 677 ntTSL 5 BASIC15.28■□□□□ 0.04
COL8A2P25067 NDUFA6-204ENST00000617763 1183 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
COL8A2P25067 C1orf43-210ENST00000640799 1287 ntTSL 5 BASIC15.28■□□□□ 0.04
COL8A2P25067 HSP90B1-211ENST00000640977 1127 ntTSL 5 BASIC15.28■□□□□ 0.04
COL8A2P25067 CTSA-201ENST00000191018 1898 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
COL8A2P25067 CADPS2-201ENST00000313070 6065 ntTSL 5 BASIC15.28■□□□□ 0.04
COL8A2P25067 MAPT-209ENST00000446361 5345 ntAPPRIS ALT2 TSL 1 (best) BASIC15.28■□□□□ 0.04
COL8A2P25067 C21orf59-201ENST00000290155 1692 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
COL8A2P25067 ZNF74-203ENST00000403682 2789 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
COL8A2P25067 AGAP4-201ENST00000311652 2715 ntAPPRIS ALT2 TSL 1 (best) BASIC15.28■□□□□ 0.04
COL8A2P25067 CDHR1-201ENST00000332904 2694 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
COL8A2P25067 COX20-203ENST00000411948 2631 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
COL8A2P25067 LINC00602-201ENST00000629776 2065 ntBASIC15.28■□□□□ 0.04
COL8A2P25067 LLGL2-203ENST00000392550 3509 ntAPPRIS P2 TSL 1 (best) BASIC15.27■□□□□ 0.04
COL8A2P25067 GALNT10-201ENST00000297107 5961 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
COL8A2P25067 KCNC4-204ENST00000438661 2953 ntAPPRIS ALT2 TSL 1 (best) BASIC15.27■□□□□ 0.04
COL8A2P25067 NPNT-203ENST00000427316 2481 ntAPPRIS ALT2 TSL 2 BASIC15.27■□□□□ 0.04
COL8A2P25067 HOXC6-202ENST00000394331 2943 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
COL8A2P25067 CTSB-202ENST00000353047 3875 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
COL8A2P25067 SLC2A11-204ENST00000398356 2388 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
COL8A2P25067 SAMD5-201ENST00000367474 6089 ntAPPRIS P1 TSL 2 BASIC15.27■□□□□ 0.04
COL8A2P25067 ACOT7-202ENST00000377842 1813 ntAPPRIS ALT2 TSL 1 (best) BASIC15.27■□□□□ 0.04
COL8A2P25067 SLC38A10-201ENST00000288439 2708 ntAPPRIS P3 TSL 1 (best) BASIC15.27■□□□□ 0.04
COL8A2P25067 PSMD3-201ENST00000264639 2158 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
COL8A2P25067 PSTK-201ENST00000368887 1705 ntAPPRIS P2 TSL 1 (best) BASIC15.27■□□□□ 0.04
COL8A2P25067 FMR1-206ENST00000370477 3437 ntTSL 5 BASIC15.27■□□□□ 0.04
COL8A2P25067 NDUFS7-201ENST00000233627 1039 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
COL8A2P25067 SPIN2B-202ENST00000333933 1258 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
COL8A2P25067 NT5E-202ENST00000369646 974 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
Retrieved 100 of 98,524 protein–RNA pairs in 27.7 ms