Protein–RNA interactions for Protein: P20020

ATP2B1, Plasma membrane calcium-transporting ATPase 1, humanhuman

Predictions only

Length 1,258 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATP2B1P20020 BOLA3-202ENST00000327428 639 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
ATP2B1P20020 LCE4A-202ENST00000368777 672 ntAPPRIS P1 TSL 2 BASIC20.9■□□□□ 0.94
ATP2B1P20020 SELENOF-202ENST00000370554 1220 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
ATP2B1P20020 AC117947.1-201ENST00000427448 529 ntBASIC20.9■□□□□ 0.94
ATP2B1P20020 AL136307.1-201ENST00000454882 411 ntTSL 2 BASIC20.9■□□□□ 0.94
ATP2B1P20020 MUC1-212ENST00000457295 1161 ntAPPRIS ALT2 TSL 2 BASIC20.9■□□□□ 0.94
ATP2B1P20020 NDUFS3-213ENST00000534716 1263 ntTSL 2 BASIC20.9■□□□□ 0.94
ATP2B1P20020 MRPL46-202ENST00000558531 1002 ntTSL 2 BASIC20.9■□□□□ 0.94
ATP2B1P20020 TRAPPC12-201ENST00000324266 2508 ntAPPRIS P2 TSL 1 (best) BASIC20.9■□□□□ 0.94
ATP2B1P20020 ANKRD10-201ENST00000267339 2495 ntAPPRIS P1 TSL 2 BASIC20.9■□□□□ 0.94
ATP2B1P20020 POC1B-GALNT4-201ENST00000547474 2207 ntTSL 2 BASIC20.9■□□□□ 0.94
ATP2B1P20020 RNFT2-209ENST00000622220 2176 ntTSL 5 BASIC20.9■□□□□ 0.94
ATP2B1P20020 ACTN4-202ENST00000390009 2102 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
ATP2B1P20020 TRIM8-201ENST00000302424 2831 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
ATP2B1P20020 ZNF710-201ENST00000268154 4617 ntAPPRIS P1 TSL 2 BASIC20.9■□□□□ 0.94
ATP2B1P20020 PLCB2-202ENST00000456256 4242 ntTSL 1 (best) BASIC20.89■□□□□ 0.94
ATP2B1P20020 LMNA-207ENST00000368301 2461 ntTSL 2 BASIC20.89■□□□□ 0.94
ATP2B1P20020 CAB39-202ENST00000409788 1626 ntAPPRIS P1 TSL 2 BASIC20.89■□□□□ 0.94
ATP2B1P20020 CBL-204ENST00000634840 4813 ntAPPRIS ALT2 TSL 5 BASIC20.89■□□□□ 0.94
ATP2B1P20020 COL27A1-201ENST00000356083 7790 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.94
ATP2B1P20020 CIAO1-203ENST00000488633 1533 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.94
ATP2B1P20020 ACD-203ENST00000602320 1408 ntAPPRIS ALT2 TSL 5 BASIC20.89■□□□□ 0.94
ATP2B1P20020 POM121C-208ENST00000615331 5835 ntAPPRIS P2 TSL 1 (best) BASIC20.89■□□□□ 0.93
ATP2B1P20020 GUCA2B-201ENST00000372581 597 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
ATP2B1P20020 BX664615.1-201ENST00000443558 458 ntBASIC20.89■□□□□ 0.93
ATP2B1P20020 RARRES2-205ENST00000482669 563 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
ATP2B1P20020 YBX1P2-201ENST00000489612 999 ntBASIC20.89■□□□□ 0.93
ATP2B1P20020 AC009065.1-201ENST00000564055 1225 ntBASIC20.89■□□□□ 0.93
ATP2B1P20020 C16orf74-203ENST00000602675 744 ntAPPRIS ALT2 TSL 1 (best) BASIC20.89■□□□□ 0.93
ATP2B1P20020 C16orf74-206ENST00000602766 832 ntAPPRIS ALT2 TSL 3 BASIC20.89■□□□□ 0.93
ATP2B1P20020 LTB4R2-202ENST00000528054 3092 ntBASIC20.89■□□□□ 0.93
ATP2B1P20020 MBD1-208ENST00000398493 1845 ntTSL 5 BASIC20.89■□□□□ 0.93
ATP2B1P20020 HNF1A-202ENST00000400024 2337 ntTSL 2 BASIC20.89■□□□□ 0.93
ATP2B1P20020 VMAC-201ENST00000339485 2254 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
ATP2B1P20020 NOC2LP1-202ENST00000452600 2235 ntBASIC20.89■□□□□ 0.93
ATP2B1P20020 FAM50B-201ENST00000380272 1628 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
ATP2B1P20020 GABRB1-201ENST00000295454 2143 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
ATP2B1P20020 GPATCH3-201ENST00000361720 2123 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
ATP2B1P20020 TPD52L1-202ENST00000368388 2147 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
ATP2B1P20020 POLD3-203ENST00000527458 2122 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
ATP2B1P20020 TSLP-203ENST00000420978 2621 ntAPPRIS ALT2 TSL 1 (best) BASIC20.89■□□□□ 0.93
ATP2B1P20020 UBQLN4-201ENST00000368309 3576 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
ATP2B1P20020 LUC7L-201ENST00000293872 1456 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
ATP2B1P20020 ZNF419-207ENST00000442920 1857 ntAPPRIS ALT2 TSL 2 BASIC20.88■□□□□ 0.93
ATP2B1P20020 RNF217-211ENST00000560949 5145 ntAPPRIS ALT2 TSL 5 BASIC20.88■□□□□ 0.93
ATP2B1P20020 ZDHHC20-201ENST00000320220 1351 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
ATP2B1P20020 EIF5A-204ENST00000416016 1336 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
ATP2B1P20020 CERS6-201ENST00000305747 7217 ntAPPRIS P3 TSL 2 BASIC20.88■□□□□ 0.93
ATP2B1P20020 LCE3C-201ENST00000333881 425 ntAPPRIS P1 BASIC20.88■□□□□ 0.93
ATP2B1P20020 FGF8-202ENST00000344255 707 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
ATP2B1P20020 ROMO1-205ENST00000397416 288 ntAPPRIS P1 TSL 3 BASIC20.88■□□□□ 0.93
ATP2B1P20020 NDUFA13-201ENST00000428459 576 ntTSL 2 BASIC20.88■□□□□ 0.93
ATP2B1P20020 FAM210CP-201ENST00000445714 574 ntBASIC20.88■□□□□ 0.93
ATP2B1P20020 ANKRD6-204ENST00000447838 2968 ntAPPRIS P3 TSL 1 (best) BASIC20.88■□□□□ 0.93
ATP2B1P20020 LINC01385-201ENST00000512310 780 ntTSL 4 BASIC20.88■□□□□ 0.93
ATP2B1P20020 AC009185.1-201ENST00000517634 911 ntTSL 3 BASIC20.88■□□□□ 0.93
ATP2B1P20020 PTP4A3-206ENST00000524028 963 ntTSL 5 BASIC20.88■□□□□ 0.93
ATP2B1P20020 CD81-212ENST00000526072 1172 ntTSL 5 BASIC20.88■□□□□ 0.93
ATP2B1P20020 PRLHR-202ENST00000636925 1275 ntAPPRIS P1 BASIC20.88■□□□□ 0.93
ATP2B1P20020 ELL2-201ENST00000237853 6046 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
ATP2B1P20020 ASB13-201ENST00000357700 2699 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
ATP2B1P20020 HAUS8-202ENST00000448593 1545 ntAPPRIS ALT2 TSL 5 BASIC20.88■□□□□ 0.93
ATP2B1P20020 PCDH7-201ENST00000361762 6403 ntAPPRIS P3 TSL 1 (best) BASIC20.88■□□□□ 0.93
ATP2B1P20020 MID1IP1-202ENST00000378474 1889 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
ATP2B1P20020 AL024508.2-201ENST00000607749 1894 ntBASIC20.88■□□□□ 0.93
ATP2B1P20020 WIPI2-201ENST00000288828 4476 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
ATP2B1P20020 REPS2-201ENST00000303843 7771 ntAPPRIS ALT2 TSL 1 (best) BASIC20.88■□□□□ 0.93
ATP2B1P20020 PPP2R2C-209ENST00000515571 1832 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
ATP2B1P20020 HNRNPUL1-203ENST00000378215 2864 ntTSL 2 BASIC20.87■□□□□ 0.93
ATP2B1P20020 LMTK2-201ENST00000297293 8946 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
ATP2B1P20020 EPHX4-201ENST00000370383 1437 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
ATP2B1P20020 PTGES-201ENST00000340607 1774 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
ATP2B1P20020 RUVBL1-202ENST00000464873 2126 ntTSL 2 BASIC20.87■□□□□ 0.93
ATP2B1P20020 RBM7-201ENST00000375490 2064 ntAPPRIS ALT1 TSL 1 (best) BASIC20.87■□□□□ 0.93
ATP2B1P20020 MSI2-203ENST00000416426 1714 ntTSL 2 BASIC20.87■□□□□ 0.93
ATP2B1P20020 PTP4A3-202ENST00000349124 2710 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
ATP2B1P20020 ARFRP1-207ENST00000612157 1698 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
ATP2B1P20020 TM2D2-201ENST00000397070 1631 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
ATP2B1P20020 OGFOD2-212ENST00000538755 1949 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
ATP2B1P20020 DMKN-208ENST00000424570 1293 ntAPPRIS ALT2 TSL 1 (best) BASIC20.87■□□□□ 0.93
ATP2B1P20020 TMA7-201ENST00000438607 561 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
ATP2B1P20020 RPL26L1-205ENST00000519974 695 ntAPPRIS P1 TSL 3 BASIC20.87■□□□□ 0.93
ATP2B1P20020 ABHD14B-208ENST00000525795 980 ntAPPRIS P1 TSL 3 BASIC20.87■□□□□ 0.93
ATP2B1P20020 SLC52A2-205ENST00000526752 710 ntTSL 3 BASIC20.87■□□□□ 0.93
ATP2B1P20020 REEP1-207ENST00000535845 1196 ntTSL 2 BASIC20.87■□□□□ 0.93
ATP2B1P20020 REEP1-209ENST00000541910 969 ntTSL 2 BASIC20.87■□□□□ 0.93
ATP2B1P20020 AC010531.1-201ENST00000568879 953 ntAPPRIS P1 TSL 4 BASIC20.87■□□□□ 0.93
ATP2B1P20020 RN7SL850P-201ENST00000579959 291 ntBASIC20.87■□□□□ 0.93
ATP2B1P20020 MIR3180-4-201ENST00000582223 153 ntBASIC20.87■□□□□ 0.93
ATP2B1P20020 APOA5-201ENST00000227665 1897 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
ATP2B1P20020 PAQR4-202ENST00000318782 2793 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
ATP2B1P20020 PIGQ-203ENST00000321878 3006 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
ATP2B1P20020 TMEM263-204ENST00000548125 3349 ntAPPRIS P1 TSL 2 BASIC20.87■□□□□ 0.93
ATP2B1P20020 RHOB-201ENST00000272233 2372 ntAPPRIS P1 BASIC20.87■□□□□ 0.93
ATP2B1P20020 PARP16-202ENST00000444347 2352 ntTSL 2 BASIC20.87■□□□□ 0.93
ATP2B1P20020 ITGA8-201ENST00000378076 6755 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
ATP2B1P20020 SLC23A3-203ENST00000409878 2010 ntAPPRIS P1 TSL 2 BASIC20.87■□□□□ 0.93
ATP2B1P20020 SLC23A3-207ENST00000455516 2048 ntTSL 2 BASIC20.87■□□□□ 0.93
ATP2B1P20020 TPGS2-219ENST00000593035 1727 ntAPPRIS ALT2 TSL 2 BASIC20.87■□□□□ 0.93
ATP2B1P20020 ARHGEF28-212ENST00000513042 6273 ntAPPRIS ALT2 TSL 5 BASIC20.87■□□□□ 0.93
Retrieved 100 of 98,524 protein–RNA pairs in 35.7 ms