Protein–RNA interactions for Protein: P11229

CHRM1, Muscarinic acetylcholine receptor M1, humanhuman

Predicted RBP Predictions only

Length 460 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHRM1P11229 NKIRAS1-208ENST00000443659 2391 ntAPPRIS P2 TSL 5 BASIC19.01■□□□□ 0.63
CHRM1P11229 PCCA-202ENST00000376285 2494 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
CHRM1P11229 TCAP-201ENST00000309889 2123 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
CHRM1P11229 SLC6A18-201ENST00000324642 2121 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
CHRM1P11229 PTGES2-AS1-201ENST00000443493 2100 ntBASIC19.01■□□□□ 0.63
CHRM1P11229 FAM160A2-201ENST00000265978 3481 ntAPPRIS P3 TSL 1 (best) BASIC19.01■□□□□ 0.63
CHRM1P11229 FBLN7-202ENST00000331203 2301 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
CHRM1P11229 MRAS-204ENST00000464896 1534 ntTSL 2 BASIC19.01■□□□□ 0.63
CHRM1P11229 STIM2-202ENST00000465503 3613 ntAPPRIS ALT2 TSL 1 (best) BASIC19.01■□□□□ 0.63
CHRM1P11229 PACRGL-203ENST00000444671 1720 ntTSL 2 BASIC19.01■□□□□ 0.63
CHRM1P11229 INS-201ENST00000250971 503 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
CHRM1P11229 CHIC2-201ENST00000263921 1194 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
CHRM1P11229 AURKAIP1-202ENST00000338338 1047 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
CHRM1P11229 AC013402.1-201ENST00000456999 561 ntTSL 4 BASIC19.01■□□□□ 0.63
CHRM1P11229 RPL28-210ENST00000560583 1204 ntTSL 2 BASIC19.01■□□□□ 0.63
CHRM1P11229 MPI-205ENST00000562606 1052 ntTSL 3 BASIC19.01■□□□□ 0.63
CHRM1P11229 TMEM220-AS1-201ENST00000579114 575 ntTSL 4 BASIC19.01■□□□□ 0.63
CHRM1P11229 AC011247.3-202ENST00000605062 570 ntTSL 4 BASIC19.01■□□□□ 0.63
CHRM1P11229 IRF5-214ENST00000613821 595 ntTSL 5 BASIC19.01■□□□□ 0.63
CHRM1P11229 AC012366.1-201ENST00000615411 473 ntTSL 5 BASIC19.01■□□□□ 0.63
CHRM1P11229 AL391807.1-203ENST00000604392 2365 ntBASIC19.01■□□□□ 0.63
CHRM1P11229 ST6GALNAC6-216ENST00000622357 2396 ntAPPRIS ALT1 TSL 1 (best) BASIC19.01■□□□□ 0.63
CHRM1P11229 FAM214B-203ENST00000378561 5771 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
CHRM1P11229 C1QTNF1-209ENST00000581774 1368 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
CHRM1P11229 FUCA1-201ENST00000374479 2047 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
CHRM1P11229 VPS26A-202ENST00000373382 3229 ntAPPRIS P1 TSL 5 BASIC19.01■□□□□ 0.63
CHRM1P11229 FOXN3-214ENST00000557258 2692 ntAPPRIS P3 TSL 1 (best) BASIC19.01■□□□□ 0.63
CHRM1P11229 SH2D3C-203ENST00000373277 2750 ntAPPRIS ALT2 TSL 1 (best) BASIC19.01■□□□□ 0.63
CHRM1P11229 SRP9-203ENST00000366839 1596 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
CHRM1P11229 C2orf81-201ENST00000290390 2227 ntAPPRIS P5 TSL 5 BASIC19.01■□□□□ 0.63
CHRM1P11229 CDK4-202ENST00000312990 1650 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
CHRM1P11229 ZDHHC5-201ENST00000287169 4666 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
CHRM1P11229 ZNF211-211ENST00000541801 2629 ntAPPRIS ALT2 TSL 3 BASIC19.01■□□□□ 0.63
CHRM1P11229 RAB11FIP5-201ENST00000258098 4342 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
CHRM1P11229 PRKRA-203ENST00000432031 1344 ntTSL 1 (best) BASIC19■□□□□ 0.63
CHRM1P11229 LMO4-202ENST00000370544 5405 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
CHRM1P11229 PDE4A-202ENST00000344979 2579 ntTSL 1 (best) BASIC19■□□□□ 0.63
CHRM1P11229 KHDRBS1-202ENST00000327300 2757 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
CHRM1P11229 NPRL3-211ENST00000611875 2881 ntAPPRIS P1 TSL 5 BASIC19■□□□□ 0.63
CHRM1P11229 MAP3K7CL-206ENST00000399928 1904 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
CHRM1P11229 HOOK1-201ENST00000371208 5857 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
CHRM1P11229 SLC39A1-209ENST00000537590 2022 ntTSL 2 BASIC19■□□□□ 0.63
CHRM1P11229 RGL3-201ENST00000380456 2542 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
CHRM1P11229 EHBP1-209ENST00000431489 5076 ntAPPRIS ALT2 TSL 1 (best) BASIC19■□□□□ 0.63
CHRM1P11229 KCNK7-202ENST00000342202 1283 ntTSL 1 (best) BASIC19■□□□□ 0.63
CHRM1P11229 RPUSD3-201ENST00000383820 1225 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
CHRM1P11229 LINC00972-202ENST00000438065 788 ntTSL 3 BASIC19■□□□□ 0.63
CHRM1P11229 NDUFB9-202ENST00000517367 636 ntTSL 3 BASIC19■□□□□ 0.63
CHRM1P11229 PRTN3-202ENST00000544537 1036 ntTSL 1 (best) BASIC19■□□□□ 0.63
CHRM1P11229 RNF126P1-202ENST00000569893 925 ntBASIC19■□□□□ 0.63
CHRM1P11229 AC034238.1-212ENST00000596137 723 ntTSL 5 BASIC19■□□□□ 0.63
CHRM1P11229 AL136038.4-201ENST00000603606 1261 ntBASIC19■□□□□ 0.63
CHRM1P11229 MARK4-211ENST00000622871 1147 ntTSL 1 (best) BASIC19■□□□□ 0.63
CHRM1P11229 PTENP1-AS-201ENST00000627688 873 ntTSL 5 BASIC19■□□□□ 0.63
CHRM1P11229 AL365255.1-201ENST00000637702 847 ntTSL 2 BASIC19■□□□□ 0.63
CHRM1P11229 BST1-201ENST00000265016 1480 ntAPPRIS P2 TSL 1 (best) BASIC19■□□□□ 0.63
CHRM1P11229 MYOZ3-203ENST00000517768 1451 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
CHRM1P11229 RBM45-201ENST00000286070 1785 ntAPPRIS P2 TSL 1 (best) BASIC19■□□□□ 0.63
CHRM1P11229 AL512353.2-201ENST00000448759 1962 ntBASIC19■□□□□ 0.63
CHRM1P11229 FAM72C-202ENST00000584486 2297 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
CHRM1P11229 CPSF3-201ENST00000238112 2345 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
CHRM1P11229 LINC00461-203ENST00000504246 2300 ntTSL 2 BASIC19■□□□□ 0.63
CHRM1P11229 AP5S1-203ENST00000379573 1848 ntTSL 1 (best) BASIC19■□□□□ 0.63
CHRM1P11229 ARMC6-220ENST00000546344 1814 ntTSL 2 BASIC19■□□□□ 0.63
CHRM1P11229 GRM5-202ENST00000305447 4571 ntAPPRIS ALT2 TSL 1 (best) BASIC19■□□□□ 0.63
CHRM1P11229 FCMR-202ENST00000442471 1441 ntTSL 2 BASIC19■□□□□ 0.63
CHRM1P11229 ADORA2A-201ENST00000337539 2569 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
CHRM1P11229 PRDM12-201ENST00000253008 2476 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
CHRM1P11229 ST14-201ENST00000278742 3539 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
CHRM1P11229 DENND5B-201ENST00000354285 3132 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
CHRM1P11229 PLXDC2-202ENST00000377242 2822 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
CHRM1P11229 FAM182B-201ENST00000376403 1681 ntAPPRIS P5 TSL 1 (best) BASIC18.99■□□□□ 0.63
CHRM1P11229 GLS-201ENST00000320717 4834 ntAPPRIS P3 TSL 1 (best) BASIC18.99■□□□□ 0.63
CHRM1P11229 ACY1-201ENST00000404366 1473 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
CHRM1P11229 GLYCTK-201ENST00000305690 1371 ntTSL 5 BASIC18.99■□□□□ 0.63
CHRM1P11229 DCTN3-201ENST00000259632 808 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
CHRM1P11229 ZNF575-201ENST00000314228 1298 ntAPPRIS P1 TSL 2 BASIC18.99■□□□□ 0.63
CHRM1P11229 S100A14-201ENST00000344616 1058 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
CHRM1P11229 HIST1H2AI-201ENST00000358739 503 ntAPPRIS P1 BASIC18.99■□□□□ 0.63
CHRM1P11229 IFT27-205ENST00000433985 1095 ntAPPRIS ALT1 TSL 1 (best) BASIC18.99■□□□□ 0.63
CHRM1P11229 LINC01014-203ENST00000455307 548 ntTSL 2 BASIC18.99■□□□□ 0.63
CHRM1P11229 AC008825.1-201ENST00000504398 452 ntTSL 3 BASIC18.99■□□□□ 0.63
CHRM1P11229 AL121672.3-201ENST00000608644 468 ntBASIC18.99■□□□□ 0.63
CHRM1P11229 AL732314.6-201ENST00000627721 484 ntTSL 4 BASIC18.99■□□□□ 0.63
CHRM1P11229 CEACAM3-208ENST00000630848 1110 ntAPPRIS ALT2 TSL 5 BASIC18.99■□□□□ 0.63
CHRM1P11229 TRAM1L1-201ENST00000310754 2023 ntAPPRIS P1 BASIC18.99■□□□□ 0.63
CHRM1P11229 PLCL1-201ENST00000428675 5125 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
CHRM1P11229 MED15P9-202ENST00000427638 1841 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
CHRM1P11229 CCDC137-201ENST00000329214 2468 ntAPPRIS P2 TSL 1 (best) BASIC18.99■□□□□ 0.63
CHRM1P11229 RUFY1-202ENST00000393438 2454 ntAPPRIS ALT2 TSL 1 (best) BASIC18.99■□□□□ 0.63
CHRM1P11229 TLE2-219ENST00000591529 2483 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
CHRM1P11229 PRRT1-202ENST00000375150 1726 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
CHRM1P11229 FEM1AP3-201ENST00000403722 1741 ntBASIC18.99■□□□□ 0.63
CHRM1P11229 IGSF8-202ENST00000368086 2366 ntAPPRIS P2 TSL 1 (best) BASIC18.99■□□□□ 0.63
CHRM1P11229 HAUS4-218ENST00000555986 1626 ntTSL 5 BASIC18.99■□□□□ 0.63
CHRM1P11229 CORO1A-216ENST00000570045 1622 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
CHRM1P11229 SCOC-208ENST00000510586 2193 ntAPPRIS ALT1 TSL 5 BASIC18.99■□□□□ 0.63
CHRM1P11229 HEXIM2-201ENST00000307275 1528 ntAPPRIS P1 TSL 2 BASIC18.99■□□□□ 0.63
CHRM1P11229 TH-202ENST00000333684 1535 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
CHRM1P11229 ZHX3-212ENST00000558993 1528 ntTSL 5 BASIC18.99■□□□□ 0.63
Retrieved 100 of 98,524 protein–RNA pairs in 27 ms