Protein–RNA interactions for Protein: P09493

TPM1, Tropomyosin alpha-1 chain, humanhuman

Predictions only

Length 284 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1P09493 CCK-202ENST00000396169 1527 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
TPM1P09493 TXNL4A-201ENST00000269601 3504 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
TPM1P09493 AMIGO2-202ENST00000429635 3058 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
TPM1P09493 STX2-201ENST00000261653 3331 ntAPPRIS ALT1 TSL 1 (best) BASIC20■□□□□ 0.79
TPM1P09493 EFHC1-206ENST00000635760 2030 ntTSL 5 BASIC20■□□□□ 0.79
TPM1P09493 CEP78-204ENST00000415759 2623 ntAPPRIS ALT2 TSL 5 BASIC20■□□□□ 0.79
TPM1P09493 LRCH3-201ENST00000334859 2258 ntTSL 1 (best) BASIC20■□□□□ 0.79
TPM1P09493 RPN2-201ENST00000237530 2515 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
TPM1P09493 PIANP-204ENST00000540656 2432 ntAPPRIS P3 TSL 2 BASIC20■□□□□ 0.79
TPM1P09493 VIM-201ENST00000224237 1868 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
TPM1P09493 CTSA-204ENST00000372484 2149 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
TPM1P09493 KCNQ5-212ENST00000628967 3527 ntTSL 2 BASIC19.99■□□□□ 0.79
TPM1P09493 CXorf40A-208ENST00000434353 1524 ntAPPRIS ALT1 TSL 5 BASIC19.99■□□□□ 0.79
TPM1P09493 CMTM8-201ENST00000307526 1174 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
TPM1P09493 MIR935-201ENST00000401179 91 ntBASIC19.99■□□□□ 0.79
TPM1P09493 ELP6-205ENST00000439305 880 ntTSL 2 BASIC19.99■□□□□ 0.79
TPM1P09493 KLF13-207ENST00000560473 489 ntTSL 3 BASIC19.99■□□□□ 0.79
TPM1P09493 GNAO1-211ENST00000570235 568 ntTSL 2 BASIC19.99■□□□□ 0.79
TPM1P09493 AC130371.2-201ENST00000619443 611 ntBASIC19.99■□□□□ 0.79
TPM1P09493 TBC1D3I-202ENST00000618620 1900 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
TPM1P09493 NSUN5-201ENST00000252594 1672 ntAPPRIS ALT2 TSL 1 (best) BASIC19.99■□□□□ 0.79
TPM1P09493 PILRB-208ENST00000452089 2099 ntAPPRIS P2 TSL 2 BASIC19.99■□□□□ 0.79
TPM1P09493 AC084018.2-201ENST00000613093 2607 ntBASIC19.99■□□□□ 0.79
TPM1P09493 PHRF1-201ENST00000264555 5523 ntAPPRIS ALT2 TSL 1 (best) BASIC19.99■□□□□ 0.79
TPM1P09493 SHISA6-202ENST00000409168 7262 ntAPPRIS ALT2 TSL 1 (best) BASIC19.99■□□□□ 0.79
TPM1P09493 AK4-208ENST00000546702 1335 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
TPM1P09493 PLXNB3-201ENST00000361971 6146 ntAPPRIS P3 TSL 1 (best) BASIC19.99■□□□□ 0.79
TPM1P09493 DTNB-209ENST00000407038 2294 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
TPM1P09493 ETV2-203ENST00000402764 1487 ntAPPRIS P3 TSL 1 (best) BASIC19.99■□□□□ 0.79
TPM1P09493 ADO-201ENST00000373783 3627 ntAPPRIS P1 BASIC19.99■□□□□ 0.79
TPM1P09493 JMJD4-207ENST00000620518 2432 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
TPM1P09493 NBL1-210ENST00000615215 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC19.98■□□□□ 0.79
TPM1P09493 LTBP4-205ENST00000396819 4764 ntAPPRIS ALT2 TSL 1 (best) BASIC19.98■□□□□ 0.79
TPM1P09493 ZNF264-202ENST00000536056 2078 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
TPM1P09493 MANSC1-202ENST00000535902 5831 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
TPM1P09493 EML2-203ENST00000536630 2791 ntAPPRIS ALT2 TSL 2 BASIC19.98■□□□□ 0.79
TPM1P09493 SH2B1-216ENST00000618521 2935 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
TPM1P09493 CYP2D7-201ENST00000358097 1655 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
TPM1P09493 ACSM2B-208ENST00000565322 1834 ntTSL 2 BASIC19.98■□□□□ 0.79
TPM1P09493 MDK-201ENST00000359803 985 ntAPPRIS P2 TSL 2 BASIC19.98■□□□□ 0.79
TPM1P09493 RXFP4-201ENST00000368318 1240 ntAPPRIS P1 BASIC19.98■□□□□ 0.79
TPM1P09493 APTR-205ENST00000447009 902 ntTSL 2 BASIC19.98■□□□□ 0.79
TPM1P09493 ASPHD1-203ENST00000483405 1115 ntAPPRIS ALT2 TSL 3 BASIC19.98■□□□□ 0.79
TPM1P09493 AC009090.2-201ENST00000565829 472 ntTSL 3 BASIC19.98■□□□□ 0.79
TPM1P09493 SLC25A39-202ENST00000377095 1565 ntAPPRIS ALT1 TSL 1 (best) BASIC19.98■□□□□ 0.79
TPM1P09493 TAF3-201ENST00000344293 4872 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
TPM1P09493 HNRNPK-202ENST00000360384 2038 ntAPPRIS ALT1 TSL 1 (best) BASIC19.98■□□□□ 0.79
TPM1P09493 CHRNA5-201ENST00000299565 3623 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
TPM1P09493 AC006064.2-201ENST00000501075 2196 ntTSL 2 BASIC19.98■□□□□ 0.79
TPM1P09493 DKK3-201ENST00000326932 2636 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
TPM1P09493 TRAM1-201ENST00000262213 2785 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
TPM1P09493 FAM69C-201ENST00000343998 3671 ntAPPRIS P1 TSL 5 BASIC19.98■□□□□ 0.79
TPM1P09493 EIF4G3-212ENST00000602326 6196 ntAPPRIS ALT2 TSL 1 (best) BASIC19.98■□□□□ 0.79
TPM1P09493 FAM118A-202ENST00000405673 1612 ntTSL 5 BASIC19.98■□□□□ 0.79
TPM1P09493 APBB1-210ENST00000530885 1626 ntTSL 2 BASIC19.98■□□□□ 0.79
TPM1P09493 JPH2-201ENST00000342272 1923 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
TPM1P09493 STXBP2-203ENST00000441779 1914 ntTSL 2 BASIC19.98■□□□□ 0.79
TPM1P09493 GPANK1-202ENST00000375895 1800 ntAPPRIS P1 TSL 5 BASIC19.97■□□□□ 0.79
TPM1P09493 EDC3-214ENST00000568176 1825 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
TPM1P09493 DNAL4-201ENST00000216068 1504 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
TPM1P09493 AC133785.1-201ENST00000429282 2824 ntTSL 2 BASIC19.97■□□□□ 0.79
TPM1P09493 PLCB1-201ENST00000338037 7092 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
TPM1P09493 TRAK2-202ENST00000430254 1436 ntTSL 2 BASIC19.97■□□□□ 0.79
TPM1P09493 KRT8P50-201ENST00000562022 1438 ntBASIC19.97■□□□□ 0.79
TPM1P09493 C15orf48-201ENST00000344300 875 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
TPM1P09493 IPO13-201ENST00000372339 1201 ntTSL 2 BASIC19.97■□□□□ 0.79
TPM1P09493 GTF2A2-203ENST00000396061 758 ntAPPRIS P1 TSL 2 BASIC19.97■□□□□ 0.79
TPM1P09493 BABAM1-202ENST00000447614 930 ntAPPRIS ALT2 TSL 5 BASIC19.97■□□□□ 0.79
TPM1P09493 FDX2-207ENST00000494368 584 ntTSL 4 BASIC19.97■□□□□ 0.79
TPM1P09493 RPS23-206ENST00000510210 1058 ntTSL 2 BASIC19.97■□□□□ 0.79
TPM1P09493 RN7SL471P-201ENST00000580476 299 ntBASIC19.97■□□□□ 0.79
TPM1P09493 NARF-204ENST00000390006 1766 ntTSL 2 BASIC19.97■□□□□ 0.79
TPM1P09493 ANKFY1-202ENST00000570535 6458 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
TPM1P09493 TBL3-205ENST00000568546 6803 ntAPPRIS P2 TSL 1 (best) BASIC19.97■□□□□ 0.79
TPM1P09493 ARNTL2-208ENST00000544915 6785 ntAPPRIS ALT2 TSL 5 BASIC19.97■□□□□ 0.79
TPM1P09493 GRAP2-202ENST00000407075 1304 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
TPM1P09493 DUSP8-201ENST00000331588 4455 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
TPM1P09493 LUC7L-221ENST00000629543 1520 ntTSL 5 BASIC19.97■□□□□ 0.79
TPM1P09493 AVPR1B-201ENST00000367126 2237 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
TPM1P09493 ACVRL1-202ENST00000419526 1356 ntTSL 2 BASIC19.96■□□□□ 0.79
TPM1P09493 ACSS2-201ENST00000253382 2925 ntTSL 2 BASIC19.96■□□□□ 0.79
TPM1P09493 AL645608.8-201ENST00000606034 2086 ntBASIC19.96■□□□□ 0.79
TPM1P09493 AP3D1-202ENST00000355272 5034 ntAPPRIS ALT2 TSL 1 (best) BASIC19.96■□□□□ 0.79
TPM1P09493 LRRC56-201ENST00000270115 2769 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
TPM1P09493 KDM6B-202ENST00000448097 5422 ntAPPRIS ALT2 TSL 5 BASIC19.96■□□□□ 0.79
TPM1P09493 TRA2A-212ENST00000621813 1931 ntAPPRIS ALT2 TSL 2 BASIC19.96■□□□□ 0.79
TPM1P09493 NFATC1-206ENST00000542384 2142 ntAPPRIS ALT2 TSL 1 (best) BASIC19.96■□□□□ 0.79
TPM1P09493 LPAR2-201ENST00000407877 1791 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
TPM1P09493 SCARF1-205ENST00000571272 2871 ntAPPRIS ALT2 TSL 1 (best) BASIC19.96■□□□□ 0.79
TPM1P09493 SH3RF1-201ENST00000284637 5272 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
TPM1P09493 ATP5D-201ENST00000215375 997 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
TPM1P09493 KIAA1522-201ENST00000294521 878 ntAPPRIS ALT2 TSL 2 BASIC19.96■□□□□ 0.79
TPM1P09493 SIVA1-201ENST00000329967 802 ntAPPRIS P2 TSL 1 (best) BASIC19.96■□□□□ 0.79
TPM1P09493 AL023284.2-201ENST00000405850 579 ntBASIC19.96■□□□□ 0.79
TPM1P09493 METTL5-206ENST00000409965 880 ntAPPRIS P2 TSL 1 (best) BASIC19.96■□□□□ 0.79
TPM1P09493 MAGI2-AS3-209ENST00000448195 774 ntTSL 3 BASIC19.96■□□□□ 0.79
TPM1P09493 AC008040.2-201ENST00000461049 708 ntBASIC19.96■□□□□ 0.79
TPM1P09493 H1FX-AS1-204ENST00000511998 917 ntTSL 5 BASIC19.96■□□□□ 0.79
TPM1P09493 ISG20-210ENST00000560741 800 ntAPPRIS P1 TSL 5 BASIC19.96■□□□□ 0.79
TPM1P09493 AC022167.3-201ENST00000564485 427 ntTSL 2 BASIC19.96■□□□□ 0.79
Retrieved 100 of 98,524 protein–RNA pairs in 33.3 ms