Protein–RNA interactions for Protein: P07858

CTSB, Cathepsin B, humanhuman

Predictions only

Length 339 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTSBP07858 KRT18P65-201ENST00000439811 1286 ntBASIC17.14■□□□□ 0.33
CTSBP07858 MINOS1P3-201ENST00000457048 203 ntBASIC17.14■□□□□ 0.33
CTSBP07858 CUTA-210ENST00000488034 769 ntAPPRIS ALT1 TSL 2 BASIC17.14■□□□□ 0.33
CTSBP07858 PP7080-204ENST00000510714 601 ntTSL 3 BASIC17.14■□□□□ 0.33
CTSBP07858 SNHG15-203ENST00000578968 982 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
CTSBP07858 AL732314.6-201ENST00000627721 484 ntTSL 4 BASIC17.14■□□□□ 0.33
CTSBP07858 KRBOX1-AS1-201ENST00000447834 2134 ntTSL 2 BASIC17.14■□□□□ 0.33
CTSBP07858 CSK-202ENST00000439220 1900 ntAPPRIS P1 TSL 2 BASIC17.13■□□□□ 0.33
CTSBP07858 NUMBL-202ENST00000540131 1931 ntAPPRIS ALT2 TSL 2 BASIC17.13■□□□□ 0.33
CTSBP07858 ATP6V0E2-203ENST00000456496 2722 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
CTSBP07858 ATP6V0E2-213ENST00000615196 2727 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
CTSBP07858 CDK13-202ENST00000340829 5066 ntAPPRIS ALT1 TSL 1 (best) BASIC17.13■□□□□ 0.33
CTSBP07858 OGG1-203ENST00000302036 2220 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
CTSBP07858 ZNF296-201ENST00000303809 1744 ntAPPRIS P2 TSL 1 (best) BASIC17.13■□□□□ 0.33
CTSBP07858 LRRC29-201ENST00000393992 1468 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
CTSBP07858 SLC23A3-207ENST00000455516 2048 ntTSL 2 BASIC17.13■□□□□ 0.33
CTSBP07858 PTGES-201ENST00000340607 1774 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
CTSBP07858 KIFC3-201ENST00000379655 3427 ntAPPRIS P3 TSL 1 (best) BASIC17.13■□□□□ 0.33
CTSBP07858 SHISA5-220ENST00000619810 2385 ntTSL 2 BASIC17.13■□□□□ 0.33
CTSBP07858 TRA2A-201ENST00000297071 1845 ntAPPRIS P3 TSL 1 (best) BASIC17.13■□□□□ 0.33
CTSBP07858 UBXN6-202ENST00000394765 1809 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
CTSBP07858 MADD-208ENST00000405573 1823 ntTSL 5 BASIC17.13■□□□□ 0.33
CTSBP07858 CDKN1C-201ENST00000380725 1220 ntAPPRIS ALT2 TSL 2 BASIC17.13■□□□□ 0.33
CTSBP07858 EIF5A2-203ENST00000474096 570 ntTSL 4 BASIC17.13■□□□□ 0.33
CTSBP07858 AC112698.1-201ENST00000510299 916 ntBASIC17.13■□□□□ 0.33
CTSBP07858 FICD-205ENST00000552758 603 ntTSL 2 BASIC17.13■□□□□ 0.33
CTSBP07858 AC091304.2-201ENST00000564639 760 ntBASIC17.13■□□□□ 0.33
CTSBP07858 AC008738.3-201ENST00000589932 659 ntTSL 2 BASIC17.13■□□□□ 0.33
CTSBP07858 AC004130.1-202ENST00000603156 666 ntTSL 2 BASIC17.13■□□□□ 0.33
CTSBP07858 REXO1L9P-201ENST00000604264 2108 ntBASIC17.13■□□□□ 0.33
CTSBP07858 AC005258.1-201ENST00000621615 1268 ntAPPRIS P1 TSL 2 BASIC17.13■□□□□ 0.33
CTSBP07858 CCNC-219ENST00000627680 896 ntTSL 5 BASIC17.13■□□□□ 0.33
CTSBP07858 ANKRD20A8P-203ENST00000641373 517 ntBASIC17.13■□□□□ 0.33
CTSBP07858 PIANP-204ENST00000540656 2432 ntAPPRIS P3 TSL 2 BASIC17.13■□□□□ 0.33
CTSBP07858 PCBP3-205ENST00000400310 2168 ntTSL 2 BASIC17.13■□□□□ 0.33
CTSBP07858 CSK-201ENST00000220003 2767 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
CTSBP07858 IRF3-203ENST00000377139 1613 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
CTSBP07858 PAX4-204ENST00000463946 1613 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
CTSBP07858 HSPB9-201ENST00000565659 1922 ntAPPRIS P1 BASIC17.13■□□□□ 0.33
CTSBP07858 ZNF446-203ENST00000594369 2238 ntAPPRIS P2 TSL 1 (best) BASIC17.13■□□□□ 0.33
CTSBP07858 RPN2-201ENST00000237530 2515 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
CTSBP07858 ZNF274-203ENST00000424679 2539 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
CTSBP07858 MEN1-202ENST00000315422 3148 ntAPPRIS ALT1 TSL 5 BASIC17.13■□□□□ 0.33
CTSBP07858 FOLH1-203ENST00000343844 2258 ntTSL 2 BASIC17.13■□□□□ 0.33
CTSBP07858 INF2-204ENST00000398337 1689 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
CTSBP07858 CPSF3-201ENST00000238112 2345 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
CTSBP07858 AP1AR-202ENST00000309703 2337 ntAPPRIS ALT1 TSL 1 (best) BASIC17.13■□□□□ 0.33
CTSBP07858 WDR59-202ENST00000536050 1752 ntTSL 2 BASIC17.12■□□□□ 0.33
CTSBP07858 MAGEA3-203ENST00000598245 1762 ntAPPRIS P1 TSL 2 BASIC17.12■□□□□ 0.33
CTSBP07858 MAGEA6-204ENST00000616035 1762 ntAPPRIS P1 TSL 5 BASIC17.12■□□□□ 0.33
CTSBP07858 CLN8-211ENST00000636934 1790 ntTSL 5 BASIC17.12■□□□□ 0.33
CTSBP07858 TPD52L1-202ENST00000368388 2147 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
CTSBP07858 CPEB2-207ENST00000507071 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
CTSBP07858 ZBTB7A-201ENST00000322357 5422 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
CTSBP07858 PRKAR1B-212ENST00000544935 2494 ntAPPRIS P1 TSL 5 BASIC17.12■□□□□ 0.33
CTSBP07858 ERICH1-201ENST00000262109 1813 ntAPPRIS P2 TSL 1 (best) BASIC17.12■□□□□ 0.33
CTSBP07858 MBD1-208ENST00000398493 1845 ntTSL 5 BASIC17.12■□□□□ 0.33
CTSBP07858 CTSH-201ENST00000220166 2190 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
CTSBP07858 FLYWCH1P1-201ENST00000460917 1874 ntBASIC17.12■□□□□ 0.33
CTSBP07858 AC016757.1-205ENST00000470346 1888 ntTSL 2 BASIC17.12■□□□□ 0.33
CTSBP07858 THUMPD2-204ENST00000505747 1970 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
CTSBP07858 ALKBH5-203ENST00000541285 1605 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
CTSBP07858 AC026362.1-201ENST00000540866 5618 ntTSL 2 BASIC17.12■□□□□ 0.33
CTSBP07858 DCTN3-201ENST00000259632 808 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
CTSBP07858 MUC1-204ENST00000343256 648 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
CTSBP07858 RPL36-202ENST00000394580 556 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
CTSBP07858 CST3-202ENST00000398409 832 ntAPPRIS P1 TSL 3 BASIC17.12■□□□□ 0.33
CTSBP07858 LINC00882-201ENST00000473636 710 ntTSL 3 BASIC17.12■□□□□ 0.33
CTSBP07858 AC087289.1-201ENST00000586808 890 ntTSL 5 BASIC17.12■□□□□ 0.33
CTSBP07858 FLT3LG-206ENST00000597551 951 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
CTSBP07858 SSBP1-215ENST00000612337 884 ntAPPRIS P1 TSL 2 BASIC17.12■□□□□ 0.33
CTSBP07858 ANKS3-230ENST00000614075 2387 ntAPPRIS P1 TSL 5 BASIC17.12■□□□□ 0.33
CTSBP07858 FAM72C-201ENST00000369175 1658 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
CTSBP07858 CELF6-204ENST00000543764 1676 ntTSL 2 BASIC17.12■□□□□ 0.33
CTSBP07858 FAM72B-207ENST00000619376 1659 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
CTSBP07858 ZMYND11-214ENST00000509513 2065 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
CTSBP07858 PML-205ENST00000395132 1738 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
CTSBP07858 ULK3-220ENST00000569437 2611 ntAPPRIS ALT1 TSL 1 (best) BASIC17.12■□□□□ 0.33
CTSBP07858 FDXR-202ENST00000413947 1809 ntTSL 2 BASIC17.12■□□□□ 0.33
CTSBP07858 KIF25-AS1-201ENST00000414364 1420 ntTSL 2 BASIC17.12■□□□□ 0.33
CTSBP07858 NFATC4-223ENST00000555802 1476 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
CTSBP07858 FAM214B-203ENST00000378561 5771 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
CTSBP07858 GBGT1-208ENST00000540636 1934 ntTSL 2 BASIC17.11■□□□□ 0.33
CTSBP07858 LMO4-202ENST00000370544 5405 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
CTSBP07858 LBHD1-210ENST00000532208 1508 ntAPPRIS P2 TSL 5 BASIC17.11■□□□□ 0.33
CTSBP07858 MATN4-205ENST00000537548 1991 ntAPPRIS ALT2 TSL 5 BASIC17.11■□□□□ 0.33
CTSBP07858 KLK5-201ENST00000336334 1563 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
CTSBP07858 GNS-208ENST00000543646 2164 ntAPPRIS ALT2 TSL 2 BASIC17.11■□□□□ 0.33
CTSBP07858 CYTH1-209ENST00000589296 2159 ntTSL 5 BASIC17.11■□□□□ 0.33
CTSBP07858 DHRS2-201ENST00000250383 1705 ntAPPRIS P3 TSL 1 (best) BASIC17.11■□□□□ 0.33
CTSBP07858 NUTM2D-201ENST00000381697 3290 ntAPPRIS P5 TSL 1 (best) BASIC17.11■□□□□ 0.33
CTSBP07858 MIR202HG-201ENST00000300167 384 ntTSL 2 BASIC17.11■□□□□ 0.33
CTSBP07858 HYI-201ENST00000372425 1265 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
CTSBP07858 ARMC12-202ENST00000373866 1254 ntAPPRIS P1 TSL 3 BASIC17.11■□□□□ 0.33
CTSBP07858 LINC02247-201ENST00000417135 743 ntTSL 3 BASIC17.11■□□□□ 0.33
CTSBP07858 RPP14-206ENST00000466547 805 ntAPPRIS P1 TSL 3 BASIC17.11■□□□□ 0.33
CTSBP07858 VENTXP7-201ENST00000475503 772 ntBASIC17.11■□□□□ 0.33
CTSBP07858 LINC02199-203ENST00000510229 496 ntTSL 3 BASIC17.11■□□□□ 0.33
CTSBP07858 AC096582.2-201ENST00000510860 516 ntBASIC17.11■□□□□ 0.33
CTSBP07858 AL121772.3-201ENST00000610840 674 ntBASIC17.11■□□□□ 0.33
Retrieved 100 of 98,524 protein–RNA pairs in 44.9 ms