Protein–RNA interactions for Protein: P05997

COL5A2, Collagen alpha-2(V) chain, humanhuman

Predicted RBP Predictions only

Length 1,499 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL5A2P05997 LRIG1-202ENST00000383703 5283 ntTSL 1 (best) BASIC23.74■■□□□ 1.39
COL5A2P05997 ECE1-205ENST00000436918 2328 ntTSL 2 BASIC23.74■■□□□ 1.39
COL5A2P05997 PRR14-203ENST00000542965 2316 ntAPPRIS P1 TSL 1 (best) BASIC23.74■■□□□ 1.39
COL5A2P05997 SLC22A1-203ENST00000457470 1452 ntTSL 5 BASIC23.74■■□□□ 1.39
COL5A2P05997 AC148477.5-201ENST00000625164 1645 ntBASIC23.74■■□□□ 1.39
COL5A2P05997 UQCC3-201ENST00000377953 1947 ntAPPRIS P1 TSL 1 (best) BASIC23.74■■□□□ 1.39
COL5A2P05997 TECR-201ENST00000215567 1171 ntAPPRIS P1 TSL 1 (best) BASIC23.74■■□□□ 1.39
COL5A2P05997 CBX2-201ENST00000269399 1061 ntTSL 1 (best) BASIC23.74■■□□□ 1.39
COL5A2P05997 ADARB2-201ENST00000381305 703 ntTSL 2 BASIC23.74■■□□□ 1.39
COL5A2P05997 PNMT-202ENST00000394246 821 ntTSL 2 BASIC23.74■■□□□ 1.39
COL5A2P05997 CENPM-203ENST00000402338 1002 ntTSL 2 BASIC23.74■■□□□ 1.39
COL5A2P05997 FAM19A5-204ENST00000406880 833 ntTSL 3 BASIC23.74■■□□□ 1.39
COL5A2P05997 MKNK2P1-201ENST00000437526 628 ntBASIC23.74■■□□□ 1.39
COL5A2P05997 DARS-AS1-203ENST00000438432 768 ntTSL 3 BASIC23.74■■□□□ 1.39
COL5A2P05997 BX890604.1-208ENST00000490920 726 ntTSL 2 BASIC23.74■■□□□ 1.39
COL5A2P05997 CIPC-205ENST00000555437 566 ntTSL 3 BASIC23.74■■□□□ 1.39
COL5A2P05997 PARP2-202ENST00000429687 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC23.74■■□□□ 1.39
COL5A2P05997 FHL1-219ENST00000618438 2178 ntTSL 3 BASIC23.73■■□□□ 1.39
COL5A2P05997 FBXL15-202ENST00000369956 2344 ntAPPRIS ALT1 TSL 1 (best) BASIC23.73■■□□□ 1.39
COL5A2P05997 REXO1-201ENST00000170168 4591 ntAPPRIS P1 TSL 1 (best) BASIC23.73■■□□□ 1.39
COL5A2P05997 ISCA1-203ENST00000375991 1958 ntAPPRIS P1 TSL 1 (best) BASIC23.73■■□□□ 1.39
COL5A2P05997 NAF1-202ENST00000422287 1604 ntAPPRIS ALT2 TSL 1 (best) BASIC23.73■■□□□ 1.39
COL5A2P05997 ADM-208ENST00000534464 1640 ntTSL 2 BASIC23.73■■□□□ 1.39
COL5A2P05997 PIK3R1-201ENST00000320694 2625 ntTSL 1 (best) BASIC23.73■■□□□ 1.39
COL5A2P05997 LINC01105-206ENST00000456327 1434 ntTSL 5 BASIC23.73■■□□□ 1.39
COL5A2P05997 SWI5-205ENST00000495313 466 ntAPPRIS ALT2 TSL 3 BASIC23.73■■□□□ 1.39
COL5A2P05997 TIMM17B-208ENST00000495490 939 ntTSL 5 BASIC23.73■■□□□ 1.39
COL5A2P05997 TMEM106C-214ENST00000550161 976 ntTSL 3 BASIC23.73■■□□□ 1.39
COL5A2P05997 MIR22HG-204ENST00000571595 767 ntTSL 5 BASIC23.73■■□□□ 1.39
COL5A2P05997 MIR4751-201ENST00000578027 74 ntBASIC23.73■■□□□ 1.39
COL5A2P05997 AC068594.1-203ENST00000581153 695 ntTSL 2 BASIC23.73■■□□□ 1.39
COL5A2P05997 RELT-202ENST00000393580 2669 ntAPPRIS P1 TSL 1 (best) BASIC23.73■■□□□ 1.39
COL5A2P05997 TSEN34-202ENST00000396383 1548 ntAPPRIS P1 TSL 1 (best) BASIC23.73■■□□□ 1.39
COL5A2P05997 ELL2P1-201ENST00000413990 1906 ntBASIC23.73■■□□□ 1.39
COL5A2P05997 DFNA5-203ENST00000409970 2005 ntTSL 5 BASIC23.72■■□□□ 1.39
COL5A2P05997 DUOXA1-201ENST00000267803 1996 ntTSL 1 (best) BASIC23.72■■□□□ 1.39
COL5A2P05997 HDAC11-202ENST00000402259 1000 ntTSL 3 BASIC23.72■■□□□ 1.39
COL5A2P05997 ARTN-206ENST00000472435 402 ntTSL 3 BASIC23.72■■□□□ 1.39
COL5A2P05997 TMEM220-203ENST00000578345 559 ntAPPRIS ALT2 TSL 2 BASIC23.72■■□□□ 1.39
COL5A2P05997 AC024592.3-202ENST00000586349 506 ntTSL 2 BASIC23.72■■□□□ 1.39
COL5A2P05997 AC092902.2-205ENST00000622381 394 ntTSL 5 BASIC23.72■■□□□ 1.39
COL5A2P05997 TBC1D3P5-201ENST00000579401 1545 ntBASIC23.72■■□□□ 1.39
COL5A2P05997 NARS2-201ENST00000281038 2519 ntAPPRIS P1 TSL 1 (best) BASIC23.72■■□□□ 1.39
COL5A2P05997 ASZ1-201ENST00000284629 1865 ntAPPRIS P1 TSL 1 (best) BASIC23.72■■□□□ 1.39
COL5A2P05997 AC093627.6-201ENST00000478759 1365 ntTSL 5 BASIC23.72■■□□□ 1.39
COL5A2P05997 SAMD11-216ENST00000620200 1874 ntTSL 5 BASIC23.72■■□□□ 1.39
COL5A2P05997 COL13A1-202ENST00000357811 2991 ntAPPRIS ALT2 TSL 5 BASIC23.72■■□□□ 1.39
COL5A2P05997 EHMT1-204ENST00000462484 2707 ntTSL 1 (best) BASIC23.72■■□□□ 1.39
COL5A2P05997 LDHD-201ENST00000300051 2067 ntAPPRIS P3 TSL 1 (best) BASIC23.72■■□□□ 1.39
COL5A2P05997 LRFN4-201ENST00000309602 2431 ntAPPRIS P1 TSL 1 (best) BASIC23.71■■□□□ 1.39
COL5A2P05997 INPP5J-204ENST00000402238 1564 ntTSL 2 BASIC23.71■■□□□ 1.39
COL5A2P05997 WNT10A-201ENST00000258411 2547 ntAPPRIS P1 TSL 1 (best) BASIC23.71■■□□□ 1.39
COL5A2P05997 GFAP-203ENST00000435360 1779 ntTSL 2 BASIC23.71■■□□□ 1.39
COL5A2P05997 TEKT5-201ENST00000283025 1612 ntAPPRIS P1 TSL 1 (best) BASIC23.71■■□□□ 1.39
COL5A2P05997 CCDC78-201ENST00000293889 1611 ntAPPRIS P2 TSL 1 (best) BASIC23.71■■□□□ 1.39
COL5A2P05997 PSMA7-201ENST00000370858 925 ntTSL 2 BASIC23.71■■□□□ 1.39
COL5A2P05997 EXOSC8-202ENST00000389704 1198 ntAPPRIS P1 TSL 1 (best) BASIC23.71■■□□□ 1.39
COL5A2P05997 UBE2F-202ENST00000409332 1138 ntTSL 5 BASIC23.71■■□□□ 1.39
COL5A2P05997 CRYGEP-201ENST00000412192 528 ntBASIC23.71■■□□□ 1.39
COL5A2P05997 IGLL3P-201ENST00000412472 434 ntBASIC23.71■■□□□ 1.39
COL5A2P05997 CYB561D1-208ENST00000528785 1271 ntAPPRIS ALT1 TSL 5 BASIC23.71■■□□□ 1.39
COL5A2P05997 CYB561D1-209ENST00000533024 913 ntTSL 2 BASIC23.71■■□□□ 1.39
COL5A2P05997 AC073592.5-201ENST00000624854 528 ntBASIC23.71■■□□□ 1.39
COL5A2P05997 GPR89P-201ENST00000407924 1495 ntBASIC23.71■■□□□ 1.39
COL5A2P05997 PRKN-202ENST00000366892 1505 ntTSL 5 BASIC23.7■■□□□ 1.39
COL5A2P05997 SEL1L-204ENST00000555824 1631 ntTSL 1 (best) BASIC23.7■■□□□ 1.39
COL5A2P05997 AOC1-202ENST00000416793 2453 ntTSL 1 (best) BASIC23.7■■□□□ 1.39
COL5A2P05997 GUK1-203ENST00000366718 1275 ntAPPRIS P3 TSL 3 BASIC23.7■■□□□ 1.38
COL5A2P05997 CFL1-212ENST00000531413 636 ntTSL 3 BASIC23.7■■□□□ 1.38
COL5A2P05997 NPAS4-204ENST00000639555 878 ntTSL 5 BASIC23.7■■□□□ 1.38
COL5A2P05997 PPIC-201ENST00000306442 1380 ntAPPRIS P1 TSL 1 (best) BASIC23.7■■□□□ 1.38
COL5A2P05997 SEPT9-246ENST00000592951 1793 ntAPPRIS ALT2 TSL 2 BASIC23.7■■□□□ 1.38
COL5A2P05997 EXOC3L2-202ENST00000413988 2964 ntAPPRIS P1 TSL 5 BASIC23.7■■□□□ 1.38
COL5A2P05997 TLX2-204ENST00000621092 1452 ntTSL 1 (best) BASIC23.69■■□□□ 1.38
COL5A2P05997 TMEM205-201ENST00000354882 1034 ntAPPRIS P1 TSL 1 (best) BASIC23.69■■□□□ 1.38
COL5A2P05997 CALY-203ENST00000368558 825 ntTSL 5 BASIC23.69■■□□□ 1.38
COL5A2P05997 AL645939.2-201ENST00000427340 991 ntBASIC23.69■■□□□ 1.38
COL5A2P05997 AC006042.2-201ENST00000428660 568 ntTSL 4 BASIC23.69■■□□□ 1.38
COL5A2P05997 PUS1-205ENST00000535067 838 ntTSL 3 BASIC23.69■■□□□ 1.38
COL5A2P05997 PXN-AS1-202ENST00000538804 508 ntTSL 4 BASIC23.69■■□□□ 1.38
COL5A2P05997 AP002472.1-201ENST00000577490 586 ntBASIC23.69■■□□□ 1.38
COL5A2P05997 TMEM205-205ENST00000586590 677 ntAPPRIS P1 TSL 5 BASIC23.69■■□□□ 1.38
COL5A2P05997 TMEM205-207ENST00000586956 1003 ntAPPRIS P1 TSL 2 BASIC23.69■■□□□ 1.38
COL5A2P05997 AC007192.2-201ENST00000600364 463 ntTSL 5 BASIC23.69■■□□□ 1.38
COL5A2P05997 ZEB1-AS1-209ENST00000607455 559 ntTSL 4 BASIC23.69■■□□□ 1.38
COL5A2P05997 KHNYN-206ENST00000556842 2443 ntAPPRIS P1 TSL 2 BASIC23.69■■□□□ 1.38
COL5A2P05997 GTF2IRD2-207ENST00000625377 1910 ntTSL 5 BASIC23.69■■□□□ 1.38
COL5A2P05997 PUF60-201ENST00000313352 1804 ntAPPRIS ALT1 TSL 1 (best) BASIC23.69■■□□□ 1.38
COL5A2P05997 SIT1-204ENST00000618781 1317 ntAPPRIS ALT2 TSL 5 BASIC23.69■■□□□ 1.38
COL5A2P05997 C2orf27B-201ENST00000623129 1325 ntTSL 1 (best) BASIC23.69■■□□□ 1.38
COL5A2P05997 ZDHHC5-204ENST00000527985 2817 ntTSL 1 (best) BASIC23.69■■□□□ 1.38
COL5A2P05997 MAGEA3-203ENST00000598245 1762 ntAPPRIS P1 TSL 2 BASIC23.69■■□□□ 1.38
COL5A2P05997 MAGEA6-204ENST00000616035 1762 ntAPPRIS P1 TSL 5 BASIC23.69■■□□□ 1.38
COL5A2P05997 EGR3-204ENST00000522910 1553 ntAPPRIS ALT1 TSL 2 BASIC23.69■■□□□ 1.38
COL5A2P05997 OGFOD2-224ENST00000545612 1465 ntTSL 2 BASIC23.69■■□□□ 1.38
COL5A2P05997 AL353593.2-201ENST00000602529 1483 ntBASIC23.69■■□□□ 1.38
COL5A2P05997 NDN-201ENST00000331837 1931 ntAPPRIS P1 BASIC23.69■■□□□ 1.38
COL5A2P05997 ARMC6-220ENST00000546344 1814 ntTSL 2 BASIC23.69■■□□□ 1.38
COL5A2P05997 H2AFZ-201ENST00000296417 979 ntAPPRIS P1 TSL 1 (best) BASIC23.68■■□□□ 1.38
COL5A2P05997 YIF1B-203ENST00000339413 1225 ntAPPRIS P1 TSL 1 (best) BASIC23.68■■□□□ 1.38
Retrieved 100 of 98,524 protein–RNA pairs in 42 ms