Protein–RNA interactions for Protein: P05067

APP, Amyloid-beta A4 protein, humanhuman

Predictions only

Length 770 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APPP05067 MAFF-207ENST00000538999 2365 ntTSL 2 BASIC21.73■■□□□ 1.07
APPP05067 CNTNAP3-204ENST00000377656 4986 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
APPP05067 PXMP4-201ENST00000217398 979 ntTSL 2 BASIC21.73■■□□□ 1.07
APPP05067 AC115618.1-201ENST00000376775 549 ntTSL 3 BASIC21.73■■□□□ 1.07
APPP05067 UBE2J2-205ENST00000400930 1021 ntTSL 5 BASIC21.73■■□□□ 1.07
APPP05067 DYDC2-206ENST00000444807 1173 ntAPPRIS P3 TSL 3 BASIC21.73■■□□□ 1.07
APPP05067 KLHL21-204ENST00000467612 1056 ntTSL 3 BASIC21.73■■□□□ 1.07
APPP05067 IGFLR1-209ENST00000592537 1195 ntAPPRIS P2 TSL 1 (best) BASIC21.73■■□□□ 1.07
APPP05067 Metazoa_SRP.33-201ENST00000613468 285 ntBASIC21.73■■□□□ 1.07
APPP05067 MPZ-206ENST00000533357 1955 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
APPP05067 CLN8-211ENST00000636934 1790 ntTSL 5 BASIC21.73■■□□□ 1.07
APPP05067 GOLPH3-201ENST00000265070 2721 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
APPP05067 PIP4K2C-202ENST00000422156 1558 ntTSL 2 BASIC21.73■■□□□ 1.07
APPP05067 LINC00602-201ENST00000629776 2065 ntBASIC21.73■■□□□ 1.07
APPP05067 SNX11-201ENST00000359238 2315 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
APPP05067 SPRED3-201ENST00000338502 4778 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
APPP05067 TTLL12-201ENST00000216129 3385 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
APPP05067 PACS2-203ENST00000447393 6365 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
APPP05067 EHMT1-203ENST00000460843 5137 ntAPPRIS P2 TSL 5 BASIC21.73■■□□□ 1.07
APPP05067 COPS7A-215ENST00000543155 2127 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
APPP05067 KRT8-216ENST00000552551 2126 ntAPPRIS P1 TSL 2 BASIC21.73■■□□□ 1.07
APPP05067 GNS-208ENST00000543646 2164 ntAPPRIS ALT2 TSL 2 BASIC21.72■■□□□ 1.07
APPP05067 KIAA1522-202ENST00000373480 5294 ntAPPRIS ALT2 TSL 1 (best) BASIC21.72■■□□□ 1.07
APPP05067 KIAA1522-203ENST00000373481 5293 ntAPPRIS ALT2 TSL 2 BASIC21.72■■□□□ 1.07
APPP05067 UNKL-202ENST00000301712 1431 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
APPP05067 MCTP2-205ENST00000543482 1422 ntTSL 2 BASIC21.72■■□□□ 1.07
APPP05067 HTATSF1-204ENST00000535601 3019 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
APPP05067 EIF4E3-201ENST00000295612 2764 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
APPP05067 SKOR1-204ENST00000554240 3597 ntAPPRIS ALT2 TSL 5 BASIC21.72■■□□□ 1.07
APPP05067 SERPINA4-201ENST00000298841 1784 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
APPP05067 DOC2A-208ENST00000564944 1782 ntAPPRIS P1 TSL 5 BASIC21.72■■□□□ 1.07
APPP05067 CPSF3-201ENST00000238112 2345 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
APPP05067 AP1AR-202ENST00000309703 2337 ntAPPRIS ALT1 TSL 1 (best) BASIC21.72■■□□□ 1.07
APPP05067 KIFC3-201ENST00000379655 3427 ntAPPRIS P3 TSL 1 (best) BASIC21.72■■□□□ 1.07
APPP05067 HIST1H2AI-201ENST00000358739 503 ntAPPRIS P1 BASIC21.72■■□□□ 1.07
APPP05067 AC092159.3-201ENST00000439196 571 ntTSL 4 BASIC21.72■■□□□ 1.07
APPP05067 TSSC2-201ENST00000450217 709 ntBASIC21.72■■□□□ 1.07
APPP05067 CSRP1-214ENST00000531916 890 ntTSL 5 BASIC21.72■■□□□ 1.07
APPP05067 RAP1B-229ENST00000543393 874 ntTSL 3 BASIC21.72■■□□□ 1.07
APPP05067 AL161669.1-201ENST00000559843 386 ntTSL 3 BASIC21.72■■□□□ 1.07
APPP05067 AC135776.1-201ENST00000319817 2481 ntBASIC21.72■■□□□ 1.07
APPP05067 CCDC74A-206ENST00000467992 1347 ntAPPRIS ALT2 TSL 1 (best) BASIC21.72■■□□□ 1.07
APPP05067 FBXL7-202ENST00000504595 4562 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
APPP05067 GBGT1-208ENST00000540636 1934 ntTSL 2 BASIC21.72■■□□□ 1.07
APPP05067 CCNJ-202ENST00000403870 2830 ntTSL 5 BASIC21.72■■□□□ 1.07
APPP05067 FZR1-203ENST00000441788 5212 ntAPPRIS P3 TSL 1 (best) BASIC21.72■■□□□ 1.07
APPP05067 FGFR1-206ENST00000397091 5702 ntAPPRIS ALT1 TSL 1 (best) BASIC21.72■■□□□ 1.07
APPP05067 OXSR1-201ENST00000311806 4553 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
APPP05067 CCDC43-201ENST00000315286 2082 ntAPPRIS P2 TSL 1 (best) BASIC21.71■■□□□ 1.07
APPP05067 GPANK1-204ENST00000375900 1814 ntAPPRIS P1 TSL 2 BASIC21.71■■□□□ 1.07
APPP05067 CIZ1-226ENST00000629610 2855 ntAPPRIS ALT2 TSL 2 BASIC21.71■■□□□ 1.07
APPP05067 ZNF470-201ENST00000330619 7151 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
APPP05067 FOLH1-203ENST00000343844 2258 ntTSL 2 BASIC21.71■■□□□ 1.07
APPP05067 FBLIM1-202ENST00000375766 3695 ntAPPRIS P1 TSL 2 BASIC21.71■■□□□ 1.07
APPP05067 CRYL1-202ENST00000382812 1581 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
APPP05067 PTPN12-201ENST00000248594 3406 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
APPP05067 LRP3-201ENST00000253193 3807 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
APPP05067 MED30-201ENST00000297347 985 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
APPP05067 SUSD4-203ENST00000344029 1056 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
APPP05067 DUSP15-203ENST00000375966 1077 ntTSL 3 BASIC21.71■■□□□ 1.07
APPP05067 DUSP15-204ENST00000398083 1212 ntTSL 5 BASIC21.71■■□□□ 1.07
APPP05067 ING5-202ENST00000406941 946 ntAPPRIS ALT1 TSL 1 (best) BASIC21.71■■□□□ 1.07
APPP05067 LEF1-AS1-201ENST00000436413 1045 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
APPP05067 LINC01128-207ENST00000449005 874 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
APPP05067 NMU-205ENST00000511469 756 ntTSL 3 BASIC21.71■■□□□ 1.07
APPP05067 FAM53C-211ENST00000513056 923 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
APPP05067 AC004771.4-201ENST00000576752 474 ntTSL 5 BASIC21.71■■□□□ 1.07
APPP05067 AC138207.7-201ENST00000584499 668 ntTSL 5 BASIC21.71■■□□□ 1.07
APPP05067 BCL10-202ENST00000620248 774 ntTSL 5 BASIC21.71■■□□□ 1.07
APPP05067 C10orf142-202ENST00000623589 1010 ntAPPRIS ALT2 TSL 5 BASIC21.71■■□□□ 1.07
APPP05067 AL365255.1-201ENST00000637702 847 ntTSL 2 BASIC21.71■■□□□ 1.07
APPP05067 A4GALT-201ENST00000249005 2020 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
APPP05067 GRAMD2B-219ENST00000544396 2822 ntTSL 2 BASIC21.71■■□□□ 1.07
APPP05067 NBL1-212ENST00000621723 2133 ntAPPRIS P3 TSL 2 BASIC21.71■■□□□ 1.07
APPP05067 METTL21A-208ENST00000448007 1770 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
APPP05067 PHGDH-209ENST00000641074 1780 ntBASIC21.71■■□□□ 1.07
APPP05067 CTSH-201ENST00000220166 2190 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
APPP05067 FDXR-205ENST00000544854 1827 ntTSL 2 BASIC21.71■■□□□ 1.07
APPP05067 PIF1-205ENST00000559239 2677 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
APPP05067 CHID1-203ENST00000436108 1477 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
APPP05067 GNAS-AS1-202ENST00000443966 2341 ntTSL 5 BASIC21.71■■□□□ 1.07
APPP05067 TBC1D3I-202ENST00000618620 1900 ntTSL 1 (best) BASIC21.7■■□□□ 1.07
APPP05067 SLC2A11-204ENST00000398356 2388 ntTSL 1 (best) BASIC21.7■■□□□ 1.07
APPP05067 MAGI3-201ENST00000307546 6430 ntTSL 5 BASIC21.7■■□□□ 1.06
APPP05067 LRRC43-201ENST00000339777 2028 ntAPPRIS P2 TSL 5 BASIC21.7■■□□□ 1.06
APPP05067 SNTB1-201ENST00000395601 5164 ntAPPRIS P1 TSL 5 BASIC21.7■■□□□ 1.06
APPP05067 POLD3-203ENST00000527458 2122 ntTSL 1 (best) BASIC21.7■■□□□ 1.06
APPP05067 SLC39A7-201ENST00000374675 2153 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
APPP05067 PSMD11-202ENST00000457654 2159 ntAPPRIS P1 TSL 2 BASIC21.7■■□□□ 1.06
APPP05067 LUC7L2-210ENST00000619796 2783 ntTSL 1 (best) BASIC21.7■■□□□ 1.06
APPP05067 PNOC-201ENST00000301908 1200 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
APPP05067 MRPL20-201ENST00000344843 721 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
APPP05067 AC051649.1-201ENST00000509204 330 ntTSL 3 BASIC21.7■■□□□ 1.06
APPP05067 AC092118.1-202ENST00000568697 718 ntTSL 3 BASIC21.7■■□□□ 1.06
APPP05067 IGHV3-41-201ENST00000613121 348 ntBASIC21.7■■□□□ 1.06
APPP05067 TMEM114-203ENST00000620492 945 ntAPPRIS P1 TSL 2 BASIC21.7■■□□□ 1.06
APPP05067 KCNE1B-204ENST00000623803 811 ntAPPRIS P2 TSL 1 (best) BASIC21.7■■□□□ 1.06
APPP05067 SPACA6-213ENST00000637797 1073 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
APPP05067 SMC4-201ENST00000344722 5356 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
APPP05067 SEMA7A-203ENST00000543145 2304 ntTSL 2 BASIC21.7■■□□□ 1.06
Retrieved 100 of 98,524 protein–RNA pairs in 38.6 ms