Protein–RNA interactions for Protein: O75396

SEC22B, Vesicle-trafficking protein SEC22b, humanhuman

Predictions only

Length 215 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SEC22BO75396 MID1IP1-201ENST00000336949 2536 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
SEC22BO75396 CSNK2A2-201ENST00000262506 1701 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
SEC22BO75396 WNT1-201ENST00000293549 1185 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
SEC22BO75396 TMIGD2-201ENST00000301272 1262 ntAPPRIS P3 TSL 1 (best) BASIC17.51■□□□□ 0.39
SEC22BO75396 TDRP-201ENST00000324079 3395 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
SEC22BO75396 KMT5A-201ENST00000330479 3069 ntAPPRIS ALT2 TSL 1 (best) BASIC17.51■□□□□ 0.39
SEC22BO75396 ZZZ3-201ENST00000370798 2468 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
SEC22BO75396 TRAPPC3-204ENST00000373166 1265 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
SEC22BO75396 C9orf66-201ENST00000382387 2918 ntAPPRIS P1 BASIC17.51■□□□□ 0.39
SEC22BO75396 SNORA78-201ENST00000459373 127 ntBASIC17.51■□□□□ 0.39
SEC22BO75396 KCNIP3-205ENST00000468529 985 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
SEC22BO75396 TMEM185A-204ENST00000507237 903 ntTSL 2 BASIC17.51■□□□□ 0.39
SEC22BO75396 CDH18-AS1-201ENST00000513573 424 ntTSL 2 BASIC17.51■□□□□ 0.39
SEC22BO75396 SLC39A13-212ENST00000531974 856 ntTSL 2 BASIC17.51■□□□□ 0.39
SEC22BO75396 AC104390.1-201ENST00000555663 520 ntBASIC17.51■□□□□ 0.39
SEC22BO75396 TMEM220-AS1-201ENST00000579114 575 ntTSL 4 BASIC17.51■□□□□ 0.39
SEC22BO75396 AC005943.1-201ENST00000585937 1002 ntAPPRIS P1 TSL 3 BASIC17.51■□□□□ 0.39
SEC22BO75396 FBXW9-203ENST00000587955 1437 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
SEC22BO75396 RAB11B-AS1-201ENST00000593581 1013 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
SEC22BO75396 RPS27A-211ENST00000639844 606 ntTSL 5 BASIC17.51■□□□□ 0.39
SEC22BO75396 CDCP1-201ENST00000296129 6006 ntAPPRIS P3 TSL 1 (best) BASIC17.51■□□□□ 0.39
SEC22BO75396 AC005833.1-201ENST00000280684 4237 ntAPPRIS P1 BASIC17.51■□□□□ 0.39
SEC22BO75396 PCGF3-201ENST00000362003 5685 ntAPPRIS P1 TSL 5 BASIC17.51■□□□□ 0.39
SEC22BO75396 C16orf45-201ENST00000300006 2404 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
SEC22BO75396 TRA2A-211ENST00000538367 2142 ntAPPRIS ALT2 TSL 2 BASIC17.51■□□□□ 0.39
SEC22BO75396 PLA2G4C-222ENST00000599921 1984 ntAPPRIS P3 TSL 1 (best) BASIC17.51■□□□□ 0.39
SEC22BO75396 HAUS8-202ENST00000448593 1545 ntAPPRIS ALT2 TSL 5 BASIC17.51■□□□□ 0.39
SEC22BO75396 ZYG11A-203ENST00000612017 3682 ntTSL 5 BASIC17.51■□□□□ 0.39
SEC22BO75396 RPS6KA5-201ENST00000418736 2249 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
SEC22BO75396 RNPS1-203ENST00000397086 2069 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
SEC22BO75396 LINC01126-201ENST00000623515 1646 ntBASIC17.5■□□□□ 0.39
SEC22BO75396 MARK2-209ENST00000509502 2862 ntAPPRIS ALT2 TSL 2 BASIC17.5■□□□□ 0.39
SEC22BO75396 GAB3-203ENST00000424127 2028 ntAPPRIS ALT2 TSL 1 (best) BASIC17.5■□□□□ 0.39
SEC22BO75396 TBKBP1-204ENST00000622396 2010 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
SEC22BO75396 AC027031.2-201ENST00000521369 1318 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
SEC22BO75396 PPP4C-202ENST00000561610 1333 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
SEC22BO75396 MPP2-206ENST00000518766 1896 ntTSL 2 BASIC17.5■□□□□ 0.39
SEC22BO75396 SLCO6A1-201ENST00000379807 2437 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
SEC22BO75396 NEXN-AS1-201ENST00000421331 2292 ntTSL 2 BASIC17.5■□□□□ 0.39
SEC22BO75396 ZNF274-202ENST00000345813 2678 ntAPPRIS ALT2 TSL 1 (best) BASIC17.5■□□□□ 0.39
SEC22BO75396 CDC25B-202ENST00000340833 1978 ntAPPRIS ALT2 TSL 1 (best) BASIC17.5■□□□□ 0.39
SEC22BO75396 RNPS1-205ENST00000561718 1806 ntTSL 3 BASIC17.5■□□□□ 0.39
SEC22BO75396 TMEM160-201ENST00000253047 663 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
SEC22BO75396 BX322234.1-201ENST00000444188 980 ntTSL 3 BASIC17.5■□□□□ 0.39
SEC22BO75396 AC008825.1-201ENST00000504398 452 ntTSL 3 BASIC17.5■□□□□ 0.39
SEC22BO75396 AL355075.4-201ENST00000554988 638 ntBASIC17.5■□□□□ 0.39
SEC22BO75396 AC044860.1-201ENST00000560756 1160 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
SEC22BO75396 C16orf74-202ENST00000602583 1237 ntAPPRIS ALT2 TSL 1 (best) BASIC17.5■□□□□ 0.39
SEC22BO75396 AC010653.2-201ENST00000623505 997 ntBASIC17.5■□□□□ 0.39
SEC22BO75396 TP73-AS1-203ENST00000423764 2875 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
SEC22BO75396 MAP3K6-202ENST00000374040 4309 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
SEC22BO75396 TUBGCP3-202ENST00000375669 2723 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
SEC22BO75396 AGER-205ENST00000375069 1538 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
SEC22BO75396 IQSEC2-202ENST00000396435 6015 ntAPPRIS ALT2 TSL 1 (best) BASIC17.5■□□□□ 0.39
SEC22BO75396 PPRC1-201ENST00000278070 5330 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
SEC22BO75396 ACVRL1-202ENST00000419526 1356 ntTSL 2 BASIC17.5■□□□□ 0.39
SEC22BO75396 MLF2-202ENST00000435120 1379 ntAPPRIS P1 TSL 2 BASIC17.5■□□□□ 0.39
SEC22BO75396 SNAP23-201ENST00000249647 2687 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
SEC22BO75396 IRF3-203ENST00000377139 1613 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
SEC22BO75396 ZSWIM8-223ENST00000605216 6004 ntAPPRIS P2 TSL 1 (best) BASIC17.5■□□□□ 0.39
SEC22BO75396 CLDN5-202ENST00000406028 2548 ntTSL 2 BASIC17.5■□□□□ 0.39
SEC22BO75396 NRXN1-220ENST00000611589 1857 ntTSL 5 BASIC17.5■□□□□ 0.39
SEC22BO75396 CLPB-212ENST00000543042 2133 ntTSL 2 BASIC17.5■□□□□ 0.39
SEC22BO75396 ZNF200-202ENST00000396870 2373 ntAPPRIS ALT2 TSL 1 (best) BASIC17.5■□□□□ 0.39
SEC22BO75396 B4GALT2-202ENST00000356836 2629 ntAPPRIS P1 TSL 2 BASIC17.5■□□□□ 0.39
SEC22BO75396 MTA1-201ENST00000331320 2876 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
SEC22BO75396 MRI1-201ENST00000040663 1735 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
SEC22BO75396 PAK4-209ENST00000599470 1715 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
SEC22BO75396 AP001273.2-201ENST00000638767 2993 ntAPPRIS P1 TSL 5 BASIC17.49■□□□□ 0.39
SEC22BO75396 SIGLEC6-203ENST00000359982 1811 ntAPPRIS ALT2 TSL 2 BASIC17.49■□□□□ 0.39
SEC22BO75396 PIF1-201ENST00000268043 2687 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
SEC22BO75396 COL4A2-201ENST00000360467 6281 ntAPPRIS P1 TSL 5 BASIC17.49■□□□□ 0.39
SEC22BO75396 ASL-204ENST00000395331 1538 ntTSL 5 BASIC17.49■□□□□ 0.39
SEC22BO75396 AC140125.2-201ENST00000502515 1517 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
SEC22BO75396 BDKRB1-202ENST00000553356 1526 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
SEC22BO75396 SH3BP4-202ENST00000392011 5194 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
SEC22BO75396 MED4-202ENST00000378586 931 ntAPPRIS ALT2 TSL 2 BASIC17.49■□□□□ 0.39
SEC22BO75396 GRAMD4P1-201ENST00000435181 1110 ntBASIC17.49■□□□□ 0.39
SEC22BO75396 GXYLT1P6-201ENST00000456472 1187 ntBASIC17.49■□□□□ 0.39
SEC22BO75396 NFATC1-206ENST00000542384 2142 ntAPPRIS ALT2 TSL 1 (best) BASIC17.49■□□□□ 0.39
SEC22BO75396 NDUFB10-202ENST00000543683 830 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
SEC22BO75396 FAM98C-205ENST00000588262 826 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
SEC22BO75396 UBALD1-209ENST00000591897 1275 ntTSL 2 BASIC17.49■□□□□ 0.39
SEC22BO75396 JOSD2-204ENST00000598418 996 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
SEC22BO75396 KLF3-201ENST00000261438 5122 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
SEC22BO75396 RABL6-201ENST00000311502 3091 ntAPPRIS P3 TSL 1 (best) BASIC17.49■□□□□ 0.39
SEC22BO75396 C18orf63-201ENST00000579455 5127 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
SEC22BO75396 MARVELD3-202ENST00000299952 2214 ntAPPRIS ALT2 TSL 2 BASIC17.49■□□□□ 0.39
SEC22BO75396 RRAGD-202ENST00000369415 4900 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
SEC22BO75396 NEURL1B-201ENST00000369800 6424 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
SEC22BO75396 STAMBPL1-203ENST00000371926 2532 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
SEC22BO75396 CHTOP-205ENST00000403433 1923 ntAPPRIS ALT2 TSL 5 BASIC17.49■□□□□ 0.39
SEC22BO75396 DIDO1-203ENST00000370366 2383 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
SEC22BO75396 SQOR-201ENST00000260324 2003 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
SEC22BO75396 BMPER-201ENST00000297161 5031 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
SEC22BO75396 HLA-DQB1-201ENST00000374943 1656 ntBASIC17.48■□□□□ 0.39
SEC22BO75396 OR13J1-201ENST00000377981 1339 ntAPPRIS P1 BASIC17.48■□□□□ 0.39
SEC22BO75396 FCGRT-201ENST00000221466 1798 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
SEC22BO75396 MFGE8-202ENST00000268151 1752 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
SEC22BO75396 TRAPPC2L-201ENST00000301021 2215 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Retrieved 100 of 98,524 protein–RNA pairs in 26.1 ms