Protein–RNA interactions for Protein: O15198

SMAD9, Mothers against decapentaplegic homolog 9, humanhuman

Known RBP Predictions only

Length 467 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD9O15198 GYG2P1-201ENST00000357871 623 ntTSL 3 BASIC16.48■□□□□ 0.23
SMAD9O15198 GUK1-204ENST00000366721 689 ntTSL 3 BASIC16.48■□□□□ 0.23
SMAD9O15198 ABCD1-202ENST00000370129 1016 ntTSL 2 BASIC16.48■□□□□ 0.23
SMAD9O15198 ZMYM5-203ENST00000382907 1092 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
SMAD9O15198 SELENOF-203ENST00000401030 727 ntTSL 2 BASIC16.48■□□□□ 0.23
SMAD9O15198 HDAC11-AS1-201ENST00000424112 515 ntTSL 2 BASIC16.48■□□□□ 0.23
SMAD9O15198 CCNG1-211ENST00000512163 919 ntTSL 2 BASIC16.48■□□□□ 0.23
SMAD9O15198 NEK7-207ENST00000538004 1036 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
SMAD9O15198 CCDC91-220ENST00000545336 2738 ntAPPRIS P1 TSL 5 BASIC16.48■□□□□ 0.23
SMAD9O15198 SH3BP2-202ENST00000435136 2318 ntAPPRIS P3 TSL 2 BASIC16.48■□□□□ 0.23
SMAD9O15198 LINC00634-201ENST00000381348 1510 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
SMAD9O15198 AC011416.4-201ENST00000639283 2195 ntTSL 5 BASIC16.48■□□□□ 0.23
SMAD9O15198 ITGA7-201ENST00000257879 4120 ntAPPRIS P3 TSL 1 (best) BASIC16.48■□□□□ 0.23
SMAD9O15198 STXBP2-202ENST00000414284 1859 ntAPPRIS ALT1 TSL 1 (best) BASIC16.48■□□□□ 0.23
SMAD9O15198 MROH1-202ENST00000423230 1712 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
SMAD9O15198 TRAF3-203ENST00000392745 2459 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
SMAD9O15198 ARHGAP11A-201ENST00000361627 5898 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
SMAD9O15198 EIF3J-201ENST00000261868 2569 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
SMAD9O15198 MCMBP-201ENST00000360003 4169 ntAPPRIS P3 TSL 2 BASIC16.47■□□□□ 0.23
SMAD9O15198 TRAF4-201ENST00000262395 2923 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
SMAD9O15198 ELAC2-202ENST00000395962 2924 ntTSL 2 BASIC16.47■□□□□ 0.23
SMAD9O15198 TMEM109-201ENST00000227525 2413 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
SMAD9O15198 EIF2B4-210ENST00000493344 1949 ntTSL 5 BASIC16.47■□□□□ 0.23
SMAD9O15198 TACSTD2-201ENST00000371225 2351 ntAPPRIS P1 BASIC16.47■□□□□ 0.23
SMAD9O15198 TNNC1-201ENST00000232975 714 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
SMAD9O15198 LCE3D-201ENST00000368787 613 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
SMAD9O15198 SDR39U1-202ENST00000538105 1041 ntTSL 2 BASIC16.47■□□□□ 0.23
SMAD9O15198 IFI27L2-206ENST00000556727 556 ntTSL 3 BASIC16.47■□□□□ 0.23
SMAD9O15198 AC009065.1-201ENST00000564055 1225 ntBASIC16.47■□□□□ 0.23
SMAD9O15198 DCTN5-208ENST00000568589 772 ntTSL 2 BASIC16.47■□□□□ 0.23
SMAD9O15198 AL360181.3-201ENST00000468317 1605 ntAPPRIS P1 TSL 5 BASIC16.47■□□□□ 0.23
SMAD9O15198 SRRM2-201ENST00000301740 9353 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
SMAD9O15198 PTP4A1-201ENST00000370651 5088 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
SMAD9O15198 HOXA9-201ENST00000343483 2060 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
SMAD9O15198 SUFU-201ENST00000369899 1839 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
SMAD9O15198 AC099343.3-201ENST00000605834 2503 ntBASIC16.47■□□□□ 0.23
SMAD9O15198 NDN-201ENST00000331837 1931 ntAPPRIS P1 BASIC16.47■□□□□ 0.23
SMAD9O15198 PLEKHB2-204ENST00000409158 2277 ntTSL 2 BASIC16.47■□□□□ 0.23
SMAD9O15198 HLA-G-205ENST00000428701 1578 ntAPPRIS P2 BASIC16.47■□□□□ 0.23
SMAD9O15198 GAS2L1P2-202ENST00000442849 2262 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
SMAD9O15198 AC138028.1-201ENST00000333666 2137 ntTSL 2 BASIC16.46■□□□□ 0.23
SMAD9O15198 IGFALS-202ENST00000415638 2136 ntTSL 2 BASIC16.46■□□□□ 0.23
SMAD9O15198 NPEPL1-203ENST00000525817 1780 ntTSL 2 BASIC16.46■□□□□ 0.23
SMAD9O15198 PDE4A-202ENST00000344979 2579 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
SMAD9O15198 ISL2-201ENST00000290759 1881 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
SMAD9O15198 CCDC120-204ENST00000597275 2752 ntAPPRIS P3 TSL 2 BASIC16.46■□□□□ 0.23
SMAD9O15198 AGER-205ENST00000375069 1538 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
SMAD9O15198 PEPD-203ENST00000436370 1638 ntTSL 2 BASIC16.46■□□□□ 0.23
SMAD9O15198 TXNL4A-201ENST00000269601 3504 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
SMAD9O15198 FAM110A-203ENST00000381939 1737 ntAPPRIS P1 TSL 3 BASIC16.46■□□□□ 0.23
SMAD9O15198 AC087457.1-201ENST00000503496 2727 ntTSL 2 BASIC16.46■□□□□ 0.23
SMAD9O15198 FGD5-201ENST00000285046 5720 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
SMAD9O15198 OXT-201ENST00000217386 513 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
SMAD9O15198 LCN8-201ENST00000371688 867 ntAPPRIS P2 TSL 1 (best) BASIC16.46■□□□□ 0.23
SMAD9O15198 MIR149-201ENST00000384879 89 ntBASIC16.46■□□□□ 0.23
SMAD9O15198 MALL-203ENST00000427178 1070 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
SMAD9O15198 SAPCD2P2-201ENST00000431719 1174 ntBASIC16.46■□□□□ 0.23
SMAD9O15198 NTF6B-201ENST00000591913 560 ntBASIC16.46■□□□□ 0.23
SMAD9O15198 ELAVL1-202ENST00000593807 856 ntTSL 3 BASIC16.46■□□□□ 0.23
SMAD9O15198 AC034238.1-212ENST00000596137 723 ntTSL 5 BASIC16.46■□□□□ 0.23
SMAD9O15198 C16orf74-207ENST00000602914 761 ntAPPRIS ALT2 TSL 2 BASIC16.46■□□□□ 0.23
SMAD9O15198 AL590326.2-201ENST00000625139 305 ntBASIC16.46■□□□□ 0.23
SMAD9O15198 NDUFAB1-201ENST00000007516 717 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
SMAD9O15198 FAM50A-202ENST00000393600 1352 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
SMAD9O15198 ATRIP-201ENST00000320211 2590 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
SMAD9O15198 CACNA1A-258ENST00000638029 7814 ntAPPRIS ALT2 TSL 5 BASIC16.46■□□□□ 0.23
SMAD9O15198 VPS26A-202ENST00000373382 3229 ntAPPRIS P1 TSL 5 BASIC16.46■□□□□ 0.23
SMAD9O15198 UROS-202ENST00000368778 1556 ntTSL 2 BASIC16.46■□□□□ 0.23
SMAD9O15198 C5orf30-203ENST00000515669 1573 ntAPPRIS P1 TSL 3 BASIC16.46■□□□□ 0.23
SMAD9O15198 CLASRP-201ENST00000221455 2234 ntAPPRIS P2 TSL 1 (best) BASIC16.46■□□□□ 0.23
SMAD9O15198 PTPRU-202ENST00000373779 5579 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
SMAD9O15198 AL390961.4-201ENST00000623958 2535 ntBASIC16.46■□□□□ 0.22
SMAD9O15198 SLK-202ENST00000369755 7766 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.22
SMAD9O15198 RNF121-201ENST00000361756 2625 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.22
SMAD9O15198 RARRES1-201ENST00000237696 1952 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.22
SMAD9O15198 PSAP-205ENST00000610929 1969 ntTSL 1 (best) BASIC16.46■□□□□ 0.22
SMAD9O15198 PCDHA13-201ENST00000289272 5260 ntAPPRIS P2 TSL 1 (best) BASIC16.46■□□□□ 0.22
SMAD9O15198 NEK2-205ENST00000540251 1318 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
SMAD9O15198 PDLIM4-201ENST00000253754 2282 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
SMAD9O15198 PRDM12-201ENST00000253008 2476 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
SMAD9O15198 PCDH7-206ENST00000543491 4457 ntAPPRIS ALT2 BASIC16.45■□□□□ 0.22
SMAD9O15198 WRB-201ENST00000333781 1616 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
SMAD9O15198 ARNT-212ENST00000515192 2892 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
SMAD9O15198 PCDHA1-202ENST00000394633 2204 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
SMAD9O15198 PCOLCE-AS1-201ENST00000442166 2537 ntTSL 2 BASIC16.45■□□□□ 0.22
SMAD9O15198 CACNA2D2-201ENST00000266039 5476 ntAPPRIS ALT2 TSL 1 (best) BASIC16.45■□□□□ 0.22
SMAD9O15198 UBL5-201ENST00000358666 513 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
SMAD9O15198 ICAM4-202ENST00000380770 1211 ntAPPRIS P3 TSL 1 (best) BASIC16.45■□□□□ 0.22
SMAD9O15198 GGT1-205ENST00000403838 1033 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
SMAD9O15198 AL513320.1-201ENST00000435049 622 ntTSL 3 BASIC16.45■□□□□ 0.22
SMAD9O15198 SGO1-208ENST00000437051 1187 ntAPPRIS ALT2 TSL 1 (best) BASIC16.45■□□□□ 0.22
SMAD9O15198 AC112907.2-201ENST00000448639 330 ntBASIC16.45■□□□□ 0.22
SMAD9O15198 SMIM29-209ENST00000636500 1186 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
SMAD9O15198 KCNH1-214ENST00000640566 1365 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
SMAD9O15198 AC009102.3-201ENST00000623118 1491 ntBASIC16.45■□□□□ 0.22
SMAD9O15198 SLC27A4-202ENST00000372870 1557 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
SMAD9O15198 STYXL1-208ENST00000451157 1570 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
SMAD9O15198 AC020661.1-201ENST00000503052 1584 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
SMAD9O15198 ACVR1B-203ENST00000426655 1782 ntTSL 2 BASIC16.45■□□□□ 0.22
SMAD9O15198 SLC5A10-203ENST00000395645 2069 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Retrieved 100 of 98,524 protein–RNA pairs in 31.8 ms