Protein–RNA interactions for Protein: O00370

LINE-1 retrotransposable element ORF2 protein, humanhuman

Predictions only

Length 1,275 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
O00370 AC099518.3-201ENST00000564808 809 ntAPPRIS P5 TSL 4 BASIC19.33■□□□□ 0.68
O00370 TEN1-204ENST00000588202 862 ntTSL 3 BASIC19.33■□□□□ 0.68
O00370 AC024563.2-201ENST00000603282 481 ntBASIC19.33■□□□□ 0.68
O00370 SLF2-205ENST00000609386 891 ntAPPRIS ALT2 BASIC19.33■□□□□ 0.68
O00370 AC010331.1-201ENST00000611423 582 ntBASIC19.33■□□□□ 0.68
O00370 LITAF-220ENST00000620789 692 ntTSL 5 BASIC19.33■□□□□ 0.68
O00370 MCCC1-201ENST00000265594 2545 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
O00370 TLE3-226ENST00000627388 5742 ntAPPRIS ALT1 TSL 5 BASIC19.33■□□□□ 0.68
O00370 BOD1L2-201ENST00000585477 3239 ntAPPRIS P1 BASIC19.33■□□□□ 0.68
O00370 TMEM214-201ENST00000238788 2990 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
O00370 UBE2D2-202ENST00000398733 2702 ntAPPRIS P2 TSL 1 (best) BASIC19.33■□□□□ 0.68
O00370 MAFF-201ENST00000338483 2490 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
O00370 CYP7B1-201ENST00000310193 2202 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
O00370 KRT89P-201ENST00000620027 1478 ntBASIC19.33■□□□□ 0.68
O00370 TBC1D3I-202ENST00000618620 1900 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
O00370 FKBP3-201ENST00000216330 1684 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
O00370 DCLK1-203ENST00000379892 2101 ntTSL 5 BASIC19.33■□□□□ 0.68
O00370 MID1IP1-202ENST00000378474 1889 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
O00370 SPC24-206ENST00000592540 2315 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
O00370 UNC5CL-202ENST00000373164 1620 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
O00370 TMEM132A-201ENST00000005286 3480 ntAPPRIS P3 TSL 5 BASIC19.33■□□□□ 0.68
O00370 ZNF74-201ENST00000357502 2788 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
O00370 CRELD2-201ENST00000328268 1357 ntAPPRIS P3 TSL 1 (best) BASIC19.32■□□□□ 0.68
O00370 CDK5R1-201ENST00000313401 4325 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
O00370 OSTM1-201ENST00000193322 4467 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
O00370 LRRC32-202ENST00000404995 2656 ntAPPRIS P1 TSL 5 BASIC19.32■□□□□ 0.68
O00370 SLC35E1-208ENST00000595753 5099 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
O00370 ZNF667-AS1-201ENST00000585445 1521 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
O00370 ACOXL-205ENST00000439055 2373 ntTSL 2 BASIC19.32■□□□□ 0.68
O00370 ISY1-201ENST00000273541 1704 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
O00370 TPGS2-219ENST00000593035 1727 ntAPPRIS ALT2 TSL 2 BASIC19.32■□□□□ 0.68
O00370 TNNI3-201ENST00000344887 840 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
O00370 TBC1D7-205ENST00000379307 1084 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
O00370 MIR1224-201ENST00000408193 85 ntBASIC19.32■□□□□ 0.68
O00370 TMEM243-203ENST00000433078 1273 ntAPPRIS P1 TSL 2 BASIC19.32■□□□□ 0.68
O00370 AC005091.1-201ENST00000441955 1190 ntTSL 3 BASIC19.32■□□□□ 0.68
O00370 ATP6V0C-203ENST00000565223 668 ntTSL 3 BASIC19.32■□□□□ 0.68
O00370 ATP6V0C-204ENST00000568562 477 ntTSL 3 BASIC19.32■□□□□ 0.68
O00370 DHRS2-210ENST00000611765 1287 ntAPPRIS ALT2 TSL 2 BASIC19.32■□□□□ 0.68
O00370 SPEG-225ENST00000617028 815 ntTSL 5 BASIC19.32■□□□□ 0.68
O00370 CLN3-259ENST00000637551 1083 ntTSL 5 BASIC19.32■□□□□ 0.68
O00370 LINC00574-201ENST00000420557 2318 ntTSL 2 BASIC19.32■□□□□ 0.68
O00370 FLYWCH1P1-201ENST00000460917 1874 ntBASIC19.32■□□□□ 0.68
O00370 PAX1-205ENST00000613128 5352 ntAPPRIS ALT2 TSL 1 (best) BASIC19.32■□□□□ 0.68
O00370 TM2D2-201ENST00000397070 1631 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
O00370 GLB1-202ENST00000307377 2018 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
O00370 NARF-204ENST00000390006 1766 ntTSL 2 BASIC19.32■□□□□ 0.68
O00370 PDLIM7-203ENST00000359895 1567 ntAPPRIS ALT2 TSL 1 (best) BASIC19.32■□□□□ 0.68
O00370 AGPAT2-201ENST00000371694 1391 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
O00370 CHRNB4-202ENST00000412074 1355 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
O00370 WSCD1-209ENST00000574232 2129 ntAPPRIS P1 TSL 5 BASIC19.31■□□□□ 0.68
O00370 ADCK5-201ENST00000308860 1949 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
O00370 DHRS2-201ENST00000250383 1705 ntAPPRIS P3 TSL 1 (best) BASIC19.31■□□□□ 0.68
O00370 GBX2-203ENST00000551105 1307 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
O00370 IL17RC-201ENST00000295981 2621 ntAPPRIS P4 TSL 2 BASIC19.31■□□□□ 0.68
O00370 TJP3-205ENST00000587686 2946 ntAPPRIS ALT2 TSL 1 (best) BASIC19.31■□□□□ 0.68
O00370 DGUOK-201ENST00000264093 1144 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
O00370 RPA2-201ENST00000313433 1237 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
O00370 AGTRAP-201ENST00000314340 1107 ntAPPRIS P3 TSL 1 (best) BASIC19.31■□□□□ 0.68
O00370 PARK7-201ENST00000338639 949 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
O00370 DGUOK-202ENST00000348222 880 ntTSL 2 BASIC19.31■□□□□ 0.68
O00370 LCN8-201ENST00000371688 867 ntAPPRIS P2 TSL 1 (best) BASIC19.31■□□□□ 0.68
O00370 MAGI2-AS3-203ENST00000424477 520 ntTSL 4 BASIC19.31■□□□□ 0.68
O00370 AC004540.1-201ENST00000439120 891 ntTSL 2 BASIC19.31■□□□□ 0.68
O00370 AC116353.4-201ENST00000507279 576 ntTSL 4 BASIC19.31■□□□□ 0.68
O00370 KRT18P35-201ENST00000510488 1269 ntBASIC19.31■□□□□ 0.68
O00370 AC008687.5-201ENST00000593746 558 ntBASIC19.31■□□□□ 0.68
O00370 DGUOK-208ENST00000629438 1029 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
O00370 GTF2IP4-202ENST00000544802 3609 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
O00370 FCMR-201ENST00000367091 1950 ntAPPRIS P3 TSL 1 (best) BASIC19.31■□□□□ 0.68
O00370 NPBWR1-201ENST00000331251 2687 ntAPPRIS P1 BASIC19.31■□□□□ 0.68
O00370 ASB13-201ENST00000357700 2699 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
O00370 ACSL6-205ENST00000379246 2622 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
O00370 TSLP-203ENST00000420978 2621 ntAPPRIS ALT2 TSL 1 (best) BASIC19.31■□□□□ 0.68
O00370 RGS3-202ENST00000342620 1714 ntTSL 5 BASIC19.31■□□□□ 0.68
O00370 MSI2-203ENST00000416426 1714 ntTSL 2 BASIC19.31■□□□□ 0.68
O00370 RREB1-203ENST00000379933 5826 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
O00370 RBCK1-203ENST00000382181 2208 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
O00370 NUMBL-207ENST00000598779 2249 ntAPPRIS ALT2 TSL 1 (best) BASIC19.31■□□□□ 0.68
O00370 HNRNPK-202ENST00000360384 2038 ntAPPRIS ALT1 TSL 1 (best) BASIC19.3■□□□□ 0.68
O00370 CLDN5-202ENST00000406028 2548 ntTSL 2 BASIC19.3■□□□□ 0.68
O00370 AL096828.2-201ENST00000567259 1965 ntBASIC19.3■□□□□ 0.68
O00370 PKD2-201ENST00000237596 5056 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
O00370 GABRB1-201ENST00000295454 2143 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
O00370 FAM187B-201ENST00000324675 1184 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
O00370 HES2-202ENST00000377836 507 ntTSL 2 BASIC19.3■□□□□ 0.68
O00370 DAP-202ENST00000432074 1048 ntTSL 2 BASIC19.3■□□□□ 0.68
O00370 TTTY14-203ENST00000447937 920 ntTSL 3 BASIC19.3■□□□□ 0.68
O00370 ENDOV-202ENST00000517295 908 ntTSL 3 BASIC19.3■□□□□ 0.68
O00370 TMEM218-206ENST00000527766 812 ntAPPRIS P1 TSL 3 BASIC19.3■□□□□ 0.68
O00370 MRPL52-210ENST00000555345 895 ntTSL 2 BASIC19.3■□□□□ 0.68
O00370 CLN6-204ENST00000564752 900 ntTSL 3 BASIC19.3■□□□□ 0.68
O00370 RPARP-AS1-206ENST00000596366 631 ntTSL 3 BASIC19.3■□□□□ 0.68
O00370 CLN6-214ENST00000636314 442 ntTSL 3 BASIC19.3■□□□□ 0.68
O00370 DDX42-202ENST00000389924 3939 ntAPPRIS P1 TSL 5 BASIC19.3■□□□□ 0.68
O00370 NOMO2-201ENST00000330537 4352 ntAPPRIS ALT2 TSL 5 BASIC19.3■□□□□ 0.68
O00370 GABBR1-204ENST00000377016 4299 ntTSL 5 BASIC19.3■□□□□ 0.68
O00370 ETS1-208ENST00000535549 4594 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
O00370 TPD52L1-202ENST00000368388 2147 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
O00370 RUVBL1-202ENST00000464873 2126 ntTSL 2 BASIC19.3■□□□□ 0.68
Retrieved 100 of 98,524 protein–RNA pairs in 46.3 ms