Protein–RNA interactions for Protein: O00337

SLC28A1, Sodium/nucleoside cotransporter 1, humanhuman

Predictions only

Length 649 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC28A1O00337 FAM182B-202ENST00000376404 456 ntAPPRIS ALT2 BASIC17.48■□□□□ 0.39
SLC28A1O00337 ERICH4-201ENST00000378187 946 ntAPPRIS P1 TSL 5 BASIC17.48■□□□□ 0.39
SLC28A1O00337 VKORC1-204ENST00000394971 664 ntTSL 5 BASIC17.48■□□□□ 0.39
SLC28A1O00337 AC011773.3-202ENST00000549291 790 ntTSL 3 BASIC17.48■□□□□ 0.39
SLC28A1O00337 TNNT1-208ENST00000587465 1065 ntAPPRIS ALT2 TSL 5 BASIC17.48■□□□□ 0.39
SLC28A1O00337 SYNGR4-204ENST00000601610 859 ntTSL 3 BASIC17.48■□□□□ 0.39
SLC28A1O00337 C16orf74-202ENST00000602583 1237 ntAPPRIS ALT2 TSL 1 (best) BASIC17.48■□□□□ 0.39
SLC28A1O00337 SNX21-213ENST00000614929 587 ntTSL 5 BASIC17.48■□□□□ 0.39
SLC28A1O00337 MYBPH-201ENST00000255416 1805 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
SLC28A1O00337 ZCWPW1-202ENST00000398027 2356 ntAPPRIS P3 TSL 1 (best) BASIC17.48■□□□□ 0.39
SLC28A1O00337 MYOZ3-203ENST00000517768 1451 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
SLC28A1O00337 SELENOF-201ENST00000331835 1781 ntAPPRIS P2 TSL 1 (best) BASIC17.48■□□□□ 0.39
SLC28A1O00337 ILF3-203ENST00000449870 6119 ntAPPRIS ALT2 TSL 1 (best) BASIC17.48■□□□□ 0.39
SLC28A1O00337 OTOP2-202ENST00000580223 2086 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
SLC28A1O00337 TLX1-201ENST00000370196 2906 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
SLC28A1O00337 ZNF200-202ENST00000396870 2373 ntAPPRIS ALT2 TSL 1 (best) BASIC17.47■□□□□ 0.39
SLC28A1O00337 NCF1B-201ENST00000423083 1516 ntTSL 2 BASIC17.47■□□□□ 0.39
SLC28A1O00337 SLC43A1-201ENST00000278426 2598 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
SLC28A1O00337 ANXA6-201ENST00000354546 2593 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
SLC28A1O00337 CCDC92-201ENST00000238156 2787 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
SLC28A1O00337 PHKA1-201ENST00000339490 6121 ntAPPRIS ALT1 TSL 1 (best) BASIC17.47■□□□□ 0.39
SLC28A1O00337 GRAMD2B-218ENST00000542322 2977 ntTSL 2 BASIC17.47■□□□□ 0.39
SLC28A1O00337 TRPM4-213ENST00000599628 1829 ntTSL 2 BASIC17.47■□□□□ 0.39
SLC28A1O00337 ANKRD6-201ENST00000339746 3073 ntAPPRIS ALT1 TSL 1 (best) BASIC17.47■□□□□ 0.39
SLC28A1O00337 NDRG2-208ENST00000397851 2022 ntAPPRIS P4 TSL 2 BASIC17.47■□□□□ 0.39
SLC28A1O00337 CLPB-212ENST00000543042 2133 ntTSL 2 BASIC17.47■□□□□ 0.39
SLC28A1O00337 TBXAS1-204ENST00000416849 2505 ntTSL 5 BASIC17.47■□□□□ 0.39
SLC28A1O00337 VAV2-203ENST00000406606 4691 ntAPPRIS P2 TSL 1 (best) BASIC17.47■□□□□ 0.39
SLC28A1O00337 AL161452.1-201ENST00000415062 1117 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
SLC28A1O00337 KCTD7-202ENST00000443322 1160 ntAPPRIS ALT1 TSL 1 (best) BASIC17.47■□□□□ 0.39
SLC28A1O00337 SNORA78-201ENST00000459373 127 ntBASIC17.47■□□□□ 0.39
SLC28A1O00337 IKBKB-210ENST00000518983 447 ntTSL 2 BASIC17.47■□□□□ 0.39
SLC28A1O00337 RAB2A-211ENST00000531289 1058 ntTSL 2 BASIC17.47■□□□□ 0.39
SLC28A1O00337 HRASLS5-205ENST00000539221 1167 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
SLC28A1O00337 DDN-AS1-201ENST00000547395 858 ntTSL 2 BASIC17.47■□□□□ 0.39
SLC28A1O00337 AL355075.4-201ENST00000554988 638 ntBASIC17.47■□□□□ 0.39
SLC28A1O00337 AC044860.1-201ENST00000560756 1160 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
SLC28A1O00337 HMBS-221ENST00000544387 1351 ntTSL 2 BASIC17.47■□□□□ 0.39
SLC28A1O00337 METTL21A-203ENST00000411432 4805 ntAPPRIS P1 TSL 2 BASIC17.47■□□□□ 0.39
SLC28A1O00337 FIBCD1-201ENST00000372337 1868 ntTSL 5 BASIC17.47■□□□□ 0.39
SLC28A1O00337 TEX264-204ENST00000415259 2290 ntAPPRIS P3 TSL 5 BASIC17.47■□□□□ 0.39
SLC28A1O00337 POLR1D-221ENST00000637180 2262 ntTSL 5 BASIC17.47■□□□□ 0.39
SLC28A1O00337 TP73-AS1-203ENST00000423764 2875 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
SLC28A1O00337 NME9-203ENST00000383180 2133 ntTSL 2 BASIC17.47■□□□□ 0.39
SLC28A1O00337 ERI1-203ENST00000519292 2107 ntAPPRIS P1 TSL 2 BASIC17.47■□□□□ 0.39
SLC28A1O00337 GABRB2-206ENST00000520240 2030 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
SLC28A1O00337 RAD23A-201ENST00000316856 1736 ntAPPRIS ALT1 TSL 1 (best) BASIC17.47■□□□□ 0.39
SLC28A1O00337 ADGRB2-201ENST00000373655 5400 ntAPPRIS P4 TSL 1 (best) BASIC17.46■□□□□ 0.39
SLC28A1O00337 ATP10A-201ENST00000356865 6680 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
SLC28A1O00337 CCDC120-204ENST00000597275 2752 ntAPPRIS P3 TSL 2 BASIC17.46■□□□□ 0.39
SLC28A1O00337 AC012317.2-201ENST00000623305 2251 ntBASIC17.46■□□□□ 0.39
SLC28A1O00337 PLD3-206ENST00000409587 2180 ntAPPRIS P1 TSL 5 BASIC17.46■□□□□ 0.39
SLC28A1O00337 NRSN2-202ENST00000382291 2088 ntAPPRIS P1 TSL 2 BASIC17.46■□□□□ 0.39
SLC28A1O00337 BPGM-202ENST00000393132 2051 ntAPPRIS P1 TSL 5 BASIC17.46■□□□□ 0.39
SLC28A1O00337 CAPN1-201ENST00000279247 3007 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
SLC28A1O00337 TIMM8A-201ENST00000372902 1664 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
SLC28A1O00337 LUC7L-201ENST00000293872 1456 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
SLC28A1O00337 WNT9B-201ENST00000290015 1376 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
SLC28A1O00337 FAM208A-209ENST00000493960 5600 ntAPPRIS P2 TSL 5 BASIC17.46■□□□□ 0.39
SLC28A1O00337 CDH18-AS1-201ENST00000513573 424 ntTSL 2 BASIC17.46■□□□□ 0.39
SLC28A1O00337 DUTP2-201ENST00000519164 463 ntBASIC17.46■□□□□ 0.39
SLC28A1O00337 MFGE8-203ENST00000542878 1172 ntTSL 2 BASIC17.46■□□□□ 0.39
SLC28A1O00337 AC005606.2-201ENST00000564438 614 ntTSL 2 BASIC17.46■□□□□ 0.39
SLC28A1O00337 AL512604.3-201ENST00000569583 964 ntBASIC17.46■□□□□ 0.39
SLC28A1O00337 TRAPPC6A-201ENST00000006275 805 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
SLC28A1O00337 TMEM191A-211ENST00000637163 1067 ntBASIC17.46■□□□□ 0.39
SLC28A1O00337 ADSL-202ENST00000342312 1808 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
SLC28A1O00337 YAP1-209ENST00000537274 5350 ntAPPRIS ALT2 TSL 5 BASIC17.46■□□□□ 0.39
SLC28A1O00337 MTHFD2L-203ENST00000395759 2354 ntAPPRIS P2 TSL 5 BASIC17.46■□□□□ 0.39
SLC28A1O00337 ARHGEF28-212ENST00000513042 6273 ntAPPRIS ALT2 TSL 5 BASIC17.46■□□□□ 0.39
SLC28A1O00337 DNAJC28-201ENST00000314399 1625 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
SLC28A1O00337 PKP3-201ENST00000331563 2809 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
SLC28A1O00337 KDELC1-201ENST00000376004 2060 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
SLC28A1O00337 PCDHA8-201ENST00000378123 2616 ntAPPRIS ALT2 BASIC17.46■□□□□ 0.39
SLC28A1O00337 SYNPO-201ENST00000307662 5374 ntAPPRIS P3 TSL 1 (best) BASIC17.46■□□□□ 0.39
SLC28A1O00337 PML-211ENST00000564428 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC17.46■□□□□ 0.39
SLC28A1O00337 TSKS-201ENST00000246801 1883 ntAPPRIS P2 TSL 1 (best) BASIC17.46■□□□□ 0.38
SLC28A1O00337 CIRBP-201ENST00000320936 1328 ntAPPRIS P3 TSL 1 (best) BASIC17.46■□□□□ 0.38
SLC28A1O00337 NEK2-205ENST00000540251 1318 ntTSL 1 (best) BASIC17.46■□□□□ 0.38
SLC28A1O00337 CIRBP-207ENST00000586472 1303 ntAPPRIS P3 TSL 3 BASIC17.46■□□□□ 0.38
SLC28A1O00337 ZDHHC23-201ENST00000330212 3778 ntAPPRIS P2 TSL 1 (best) BASIC17.45■□□□□ 0.38
SLC28A1O00337 CCDC177-201ENST00000599174 4131 ntAPPRIS P1 TSL 3 BASIC17.45■□□□□ 0.38
SLC28A1O00337 SMARCD3-202ENST00000356800 1669 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
SLC28A1O00337 TAF15-211ENST00000604841 2140 ntAPPRIS ALT2 TSL 1 (best) BASIC17.45■□□□□ 0.38
SLC28A1O00337 ABO-203ENST00000611156 1577 ntAPPRIS ALT2 TSL 5 BASIC17.45■□□□□ 0.38
SLC28A1O00337 PPP1R9B-202ENST00000612501 4167 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
SLC28A1O00337 SENP5-201ENST00000323460 6308 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
SLC28A1O00337 RGMB-AS1-201ENST00000498871 1903 ntTSL 2 BASIC17.45■□□□□ 0.38
SLC28A1O00337 TOR3A-203ENST00000367627 2724 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
SLC28A1O00337 EIF3C-211ENST00000566866 2986 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
SLC28A1O00337 PGM5-202ENST00000396396 3338 ntAPPRIS P1 TSL 2 BASIC17.45■□□□□ 0.38
SLC28A1O00337 ARNT-212ENST00000515192 2892 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
SLC28A1O00337 CDK11A-203ENST00000357760 2446 ntAPPRIS ALT1 TSL 1 (best) BASIC17.45■□□□□ 0.38
SLC28A1O00337 CDK11A-204ENST00000358779 2419 ntAPPRIS ALT1 TSL 1 (best) BASIC17.45■□□□□ 0.38
SLC28A1O00337 CDK11A-206ENST00000378638 2429 ntTSL 5 BASIC17.45■□□□□ 0.38
SLC28A1O00337 CDK11A-208ENST00000404249 2449 ntAPPRIS P4 TSL 1 (best) BASIC17.45■□□□□ 0.38
SLC28A1O00337 RNF166-203ENST00000541206 2419 ntTSL 2 BASIC17.45■□□□□ 0.38
SLC28A1O00337 PLXND1-205ENST00000504689 546 ntTSL 3 BASIC17.45■□□□□ 0.38
SLC28A1O00337 AC134349.1-201ENST00000543969 385 ntTSL 3 BASIC17.45■□□□□ 0.38
SLC28A1O00337 SLC39A2-203ENST00000554422 1259 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
Retrieved 100 of 98,524 protein–RNA pairs in 63.8 ms