Protein–RNA interactions for Protein: A6NLX3

SPDYE4, Speedy protein E4, humanhuman

Predictions only

Length 237 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SPDYE4A6NLX3 ZNF575-205ENST00000601282 1086 ntAPPRIS P1 TSL 2 BASIC20.49■□□□□ 0.87
SPDYE4A6NLX3 AC022960.2-201ENST00000616300 666 ntBASIC20.49■□□□□ 0.87
SPDYE4A6NLX3 AC010653.2-201ENST00000623505 997 ntBASIC20.49■□□□□ 0.87
SPDYE4A6NLX3 AC027281.2-201ENST00000623856 713 ntBASIC20.49■□□□□ 0.87
SPDYE4A6NLX3 PLBD2-201ENST00000280800 4800 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
SPDYE4A6NLX3 KRT8P8-201ENST00000434750 1448 ntBASIC20.49■□□□□ 0.87
SPDYE4A6NLX3 CPEB2-202ENST00000345451 2013 ntAPPRIS ALT2 TSL 1 (best) BASIC20.49■□□□□ 0.87
SPDYE4A6NLX3 PODXL2-201ENST00000342480 2186 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
SPDYE4A6NLX3 TCTN1-225ENST00000551590 2309 ntAPPRIS ALT2 TSL 1 (best) BASIC20.49■□□□□ 0.87
SPDYE4A6NLX3 NPRL3-201ENST00000399953 2784 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
SPDYE4A6NLX3 PFDN6-206ENST00000463584 1915 ntTSL 3 BASIC20.49■□□□□ 0.87
SPDYE4A6NLX3 SAMD11-210ENST00000616016 2391 ntTSL 5 BASIC20.49■□□□□ 0.87
SPDYE4A6NLX3 SAMD11-215ENST00000618779 2368 ntAPPRIS ALT2 TSL 5 BASIC20.49■□□□□ 0.87
SPDYE4A6NLX3 TSC22D1-AS1-201ENST00000616360 2845 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
SPDYE4A6NLX3 BRSK2-215ENST00000544817 1842 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
SPDYE4A6NLX3 DCHS2-201ENST00000339452 5064 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
SPDYE4A6NLX3 ANKRD23-202ENST00000331001 2455 ntTSL 2 BASIC20.48■□□□□ 0.87
SPDYE4A6NLX3 SLC23A3-201ENST00000295738 2037 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
SPDYE4A6NLX3 SLC16A3-221ENST00000617373 2048 ntAPPRIS P1 TSL 5 BASIC20.48■□□□□ 0.87
SPDYE4A6NLX3 TTLL11-201ENST00000321582 3250 ntAPPRIS P1 TSL 5 BASIC20.48■□□□□ 0.87
SPDYE4A6NLX3 KLHDC4-201ENST00000270583 1886 ntAPPRIS P3 TSL 1 (best) BASIC20.48■□□□□ 0.87
SPDYE4A6NLX3 VSX2-201ENST00000261980 2995 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
SPDYE4A6NLX3 UBE2Q2-204ENST00000561851 1582 ntTSL 2 BASIC20.48■□□□□ 0.87
SPDYE4A6NLX3 SAPCD2P2-201ENST00000431719 1174 ntBASIC20.48■□□□□ 0.87
SPDYE4A6NLX3 MRPS36-204ENST00000512880 1200 ntTSL 5 BASIC20.48■□□□□ 0.87
SPDYE4A6NLX3 SLC14A1-206ENST00000535474 1048 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
SPDYE4A6NLX3 CD320-202ENST00000537716 1119 ntTSL 2 BASIC20.48■□□□□ 0.87
SPDYE4A6NLX3 ADGRD1-AS1-202ENST00000542980 1277 ntTSL 4 BASIC20.48■□□□□ 0.87
SPDYE4A6NLX3 DBP-204ENST00000599385 709 ntTSL 3 BASIC20.48■□□□□ 0.87
SPDYE4A6NLX3 MRPS36-205ENST00000602380 1200 ntTSL 2 BASIC20.48■□□□□ 0.87
SPDYE4A6NLX3 AC140113.3-201ENST00000605663 199 ntBASIC20.48■□□□□ 0.87
SPDYE4A6NLX3 AC027348.2-201ENST00000624375 642 ntBASIC20.48■□□□□ 0.87
SPDYE4A6NLX3 ADAD1-202ENST00000388724 1912 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
SPDYE4A6NLX3 ZNF416-201ENST00000196489 2561 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
SPDYE4A6NLX3 FARP2-202ENST00000373287 2580 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
SPDYE4A6NLX3 ADORA1-204ENST00000367236 3407 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
SPDYE4A6NLX3 HASPIN-201ENST00000325418 2797 ntAPPRIS P1 BASIC20.48■□□□□ 0.87
SPDYE4A6NLX3 FBXO18-203ENST00000397269 3640 ntTSL 5 BASIC20.48■□□□□ 0.87
SPDYE4A6NLX3 CARD9-202ENST00000371734 1814 ntTSL 5 BASIC20.48■□□□□ 0.87
SPDYE4A6NLX3 KRT14-201ENST00000167586 1662 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
SPDYE4A6NLX3 EPHX1-201ENST00000272167 1660 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
SPDYE4A6NLX3 TMEM230-206ENST00000379283 1660 ntAPPRIS P1 TSL 3 BASIC20.48■□□□□ 0.87
SPDYE4A6NLX3 PSPC1-206ENST00000619300 2013 ntAPPRIS P1 TSL 5 BASIC20.48■□□□□ 0.87
SPDYE4A6NLX3 RGS3-232ENST00000620489 1503 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
SPDYE4A6NLX3 MOK-225ENST00000522867 1883 ntTSL 5 BASIC20.47■□□□□ 0.87
SPDYE4A6NLX3 SLC25A39-202ENST00000377095 1565 ntAPPRIS ALT1 TSL 1 (best) BASIC20.47■□□□□ 0.87
SPDYE4A6NLX3 C18orf21-205ENST00000592875 1581 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
SPDYE4A6NLX3 ANKRD13D-216ENST00000514166 2138 ntTSL 2 BASIC20.47■□□□□ 0.87
SPDYE4A6NLX3 WSCD1-209ENST00000574232 2129 ntAPPRIS P1 TSL 5 BASIC20.47■□□□□ 0.87
SPDYE4A6NLX3 MED26-207ENST00000611692 1444 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
SPDYE4A6NLX3 AL512625.1-201ENST00000305709 2541 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
SPDYE4A6NLX3 JKAMP-202ENST00000356057 2524 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
SPDYE4A6NLX3 APBB1-210ENST00000530885 1626 ntTSL 2 BASIC20.47■□□□□ 0.87
SPDYE4A6NLX3 GGCT-202ENST00000275428 1173 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
SPDYE4A6NLX3 SCGB3A1-201ENST00000292641 521 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
SPDYE4A6NLX3 TYMSOS-201ENST00000323813 844 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
SPDYE4A6NLX3 C21orf2-201ENST00000325223 1283 ntAPPRIS ALT2 TSL 1 (best) BASIC20.47■□□□□ 0.87
SPDYE4A6NLX3 MAP1LC3A-203ENST00000397709 698 ntAPPRIS P1 TSL 3 BASIC20.47■□□□□ 0.87
SPDYE4A6NLX3 UBE2C-206ENST00000405520 641 ntTSL 2 BASIC20.47■□□□□ 0.87
SPDYE4A6NLX3 AC004540.1-201ENST00000439120 891 ntTSL 2 BASIC20.47■□□□□ 0.87
SPDYE4A6NLX3 TSPY17P-201ENST00000450329 467 ntBASIC20.47■□□□□ 0.87
SPDYE4A6NLX3 SURF4-206ENST00000485435 1206 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
SPDYE4A6NLX3 LY6E-210ENST00000521182 1079 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
SPDYE4A6NLX3 ALKAL1-202ENST00000523939 536 ntAPPRIS ALT2 TSL 1 (best) BASIC20.47■□□□□ 0.87
SPDYE4A6NLX3 UBE2C-208ENST00000617055 705 ntTSL 3 BASIC20.47■□□□□ 0.87
SPDYE4A6NLX3 AC141257.4-201ENST00000634557 245 ntBASIC20.47■□□□□ 0.87
SPDYE4A6NLX3 AC136944.6-201ENST00000634818 245 ntBASIC20.47■□□□□ 0.87
SPDYE4A6NLX3 AC009452.1-201ENST00000640823 606 ntBASIC20.47■□□□□ 0.87
SPDYE4A6NLX3 BIRC8-201ENST00000426466 2026 ntAPPRIS P1 BASIC20.47■□□□□ 0.87
SPDYE4A6NLX3 SMYD2-201ENST00000366957 1671 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
SPDYE4A6NLX3 EHMT1-236ENST00000637161 5049 ntAPPRIS ALT2 TSL 5 BASIC20.47■□□□□ 0.87
SPDYE4A6NLX3 PRSS36-201ENST00000268281 2840 ntAPPRIS P3 TSL 1 (best) BASIC20.47■□□□□ 0.87
SPDYE4A6NLX3 ZNF280D-205ENST00000559000 4726 ntAPPRIS ALT2 TSL 2 BASIC20.47■□□□□ 0.87
SPDYE4A6NLX3 RALGAPA1-219ENST00000637992 8512 ntTSL 5 BASIC20.47■□□□□ 0.87
SPDYE4A6NLX3 SYTL3-201ENST00000297239 2292 ntAPPRIS ALT1 TSL 1 (best) BASIC20.47■□□□□ 0.87
SPDYE4A6NLX3 C12orf56-207ENST00000543942 3242 ntAPPRIS P1 TSL 5 BASIC20.47■□□□□ 0.87
SPDYE4A6NLX3 NUDT9-201ENST00000302174 1701 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
SPDYE4A6NLX3 ADRB1-201ENST00000369295 2853 ntAPPRIS P1 BASIC20.47■□□□□ 0.87
SPDYE4A6NLX3 CELF6-202ENST00000395258 1741 ntTSL 5 BASIC20.47■□□□□ 0.87
SPDYE4A6NLX3 PACSIN2-205ENST00000407585 3080 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
SPDYE4A6NLX3 SPECC1-203ENST00000395525 2536 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
SPDYE4A6NLX3 C6orf132-201ENST00000341865 6210 ntAPPRIS P2 TSL 5 BASIC20.47■□□□□ 0.87
SPDYE4A6NLX3 CICP6-201ENST00000457191 2729 ntBASIC20.47■□□□□ 0.87
SPDYE4A6NLX3 GLRB-201ENST00000264428 3126 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
SPDYE4A6NLX3 LRRIQ3-203ENST00000370911 1591 ntAPPRIS ALT2 TSL 1 (best) BASIC20.46■□□□□ 0.87
SPDYE4A6NLX3 GLT8D1-213ENST00000491606 1577 ntAPPRIS P1 TSL 5 BASIC20.46■□□□□ 0.87
SPDYE4A6NLX3 WDR34-201ENST00000372715 1755 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
SPDYE4A6NLX3 CLN8-211ENST00000636934 1790 ntTSL 5 BASIC20.46■□□□□ 0.87
SPDYE4A6NLX3 ARHGAP22-203ENST00000374172 2380 ntTSL 2 BASIC20.46■□□□□ 0.87
SPDYE4A6NLX3 FBXO18-201ENST00000362091 3560 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
SPDYE4A6NLX3 GRAMD1A-211ENST00000599564 2825 ntTSL 5 BASIC20.46■□□□□ 0.87
SPDYE4A6NLX3 ACADVL-205ENST00000543245 2227 ntTSL 2 BASIC20.46■□□□□ 0.87
SPDYE4A6NLX3 EARS2-210ENST00000564501 2027 ntTSL 5 BASIC20.46■□□□□ 0.87
SPDYE4A6NLX3 KRT16-201ENST00000301653 1644 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
SPDYE4A6NLX3 GPR139-202ENST00000570682 1613 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
SPDYE4A6NLX3 PTPN18-201ENST00000175756 3669 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
SPDYE4A6NLX3 GPRC5B-201ENST00000300571 5213 ntAPPRIS P2 TSL 1 (best) BASIC20.46■□□□□ 0.87
SPDYE4A6NLX3 N4BP3-201ENST00000274605 6080 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
SPDYE4A6NLX3 TBC1D10C-201ENST00000312390 1497 ntTSL 5 BASIC20.46■□□□□ 0.87
SPDYE4A6NLX3 PDCD2-208ENST00000541970 3378 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Retrieved 100 of 98,524 protein–RNA pairs in 32.6 ms