Protein–RNA interactions for Protein: A0A576

TCRBV9S1A1T, T-cell receptor beta variable 3-1 (Fragment), humanhuman

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TCRBV9S1A1TA0A576 AC140125.2-201ENST00000502515 1517 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
TCRBV9S1A1TA0A576 CADPS2-201ENST00000313070 6065 ntTSL 5 BASIC18.26■□□□□ 0.51
TCRBV9S1A1TA0A576 CAMK2B-204ENST00000350811 2292 ntAPPRIS P4 TSL 2 BASIC18.26■□□□□ 0.51
TCRBV9S1A1TA0A576 FBXW11-202ENST00000296933 4539 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
TCRBV9S1A1TA0A576 ADIRF-AS1-201ENST00000418273 2627 ntTSL 3 BASIC18.26■□□□□ 0.51
TCRBV9S1A1TA0A576 KCTD20-210ENST00000536244 5345 ntTSL 2 BASIC18.26■□□□□ 0.51
TCRBV9S1A1TA0A576 ZNF296-201ENST00000303809 1744 ntAPPRIS P2 TSL 1 (best) BASIC18.26■□□□□ 0.51
TCRBV9S1A1TA0A576 ACBD5-201ENST00000375888 1747 ntAPPRIS ALT2 TSL 5 BASIC18.26■□□□□ 0.51
TCRBV9S1A1TA0A576 NR1H2-202ENST00000411902 1466 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
TCRBV9S1A1TA0A576 JMJD4-201ENST00000366758 2595 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
TCRBV9S1A1TA0A576 PCDHA12-202ENST00000613593 2588 ntBASIC18.26■□□□□ 0.51
TCRBV9S1A1TA0A576 SREBF2-201ENST00000361204 5240 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
TCRBV9S1A1TA0A576 KCNQ2-207ENST00000370224 3004 ntTSL 5 BASIC18.25■□□□□ 0.51
TCRBV9S1A1TA0A576 KCTD2-201ENST00000322444 3635 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
TCRBV9S1A1TA0A576 NADSYN1-201ENST00000319023 2773 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
TCRBV9S1A1TA0A576 PEX16-202ENST00000378750 1335 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
TCRBV9S1A1TA0A576 AC132938.6-201ENST00000623828 1655 ntBASIC18.25■□□□□ 0.51
TCRBV9S1A1TA0A576 AC013275.1-201ENST00000413602 2019 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
TCRBV9S1A1TA0A576 PRRT2-216ENST00000637403 2033 ntTSL 5 BASIC18.25■□□□□ 0.51
TCRBV9S1A1TA0A576 SQSTM1-202ENST00000389805 2986 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
TCRBV9S1A1TA0A576 DAG1-219ENST00000538711 5582 ntAPPRIS P1 TSL 5 BASIC18.25■□□□□ 0.51
TCRBV9S1A1TA0A576 MRAS-204ENST00000464896 1534 ntTSL 2 BASIC18.25■□□□□ 0.51
TCRBV9S1A1TA0A576 AL138828.1-202ENST00000576956 1881 ntTSL 5 BASIC18.25■□□□□ 0.51
TCRBV9S1A1TA0A576 NRP1-204ENST00000374822 2213 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
TCRBV9S1A1TA0A576 NUMBL-207ENST00000598779 2249 ntAPPRIS ALT2 TSL 1 (best) BASIC18.25■□□□□ 0.51
TCRBV9S1A1TA0A576 DGKI-203ENST00000446122 4070 ntAPPRIS ALT2 TSL 5 BASIC18.25■□□□□ 0.51
TCRBV9S1A1TA0A576 TAF1C-222ENST00000570117 2349 ntAPPRIS ALT2 TSL 2 BASIC18.25■□□□□ 0.51
TCRBV9S1A1TA0A576 AC100803.2-201ENST00000562459 1963 ntBASIC18.25■□□□□ 0.51
TCRBV9S1A1TA0A576 DCAF8-218ENST00000610139 1607 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
TCRBV9S1A1TA0A576 MDFI-202ENST00000373050 809 ntTSL 2 BASIC18.25■□□□□ 0.51
TCRBV9S1A1TA0A576 RNF144A-AS1-205ENST00000439208 757 ntTSL 3 BASIC18.25■□□□□ 0.51
TCRBV9S1A1TA0A576 MLF2-210ENST00000542154 838 ntAPPRIS P1 TSL 5 BASIC18.25■□□□□ 0.51
TCRBV9S1A1TA0A576 C14orf144-201ENST00000553757 537 ntTSL 4 BASIC18.25■□□□□ 0.51
TCRBV9S1A1TA0A576 Z99916.2-201ENST00000604037 246 ntBASIC18.25■□□□□ 0.51
TCRBV9S1A1TA0A576 TRAM1-201ENST00000262213 2785 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
TCRBV9S1A1TA0A576 RAB11FIP2-202ENST00000369199 6119 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
TCRBV9S1A1TA0A576 HOXA-AS3-205ENST00000524304 2063 ntTSL 2 BASIC18.25■□□□□ 0.51
TCRBV9S1A1TA0A576 CSNK2A2-201ENST00000262506 1701 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
TCRBV9S1A1TA0A576 FBXL7-202ENST00000504595 4562 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
TCRBV9S1A1TA0A576 RAB39A-201ENST00000320578 1830 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
TCRBV9S1A1TA0A576 PRDM5-201ENST00000264808 5330 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
TCRBV9S1A1TA0A576 FAM50B-202ENST00000380274 1932 ntAPPRIS P1 BASIC18.25■□□□□ 0.51
TCRBV9S1A1TA0A576 RSPH6A-201ENST00000221538 2456 ntAPPRIS P2 TSL 1 (best) BASIC18.25■□□□□ 0.51
TCRBV9S1A1TA0A576 AC055811.2-201ENST00000427497 1693 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
TCRBV9S1A1TA0A576 DNM3-203ENST00000367733 2322 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
TCRBV9S1A1TA0A576 DKK3-203ENST00000525493 1326 ntTSL 2 BASIC18.24■□□□□ 0.51
TCRBV9S1A1TA0A576 SNX1-208ENST00000559844 1971 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
TCRBV9S1A1TA0A576 ZNF256-202ENST00000598928 1958 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
TCRBV9S1A1TA0A576 TMEFF2-201ENST00000272771 2604 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
TCRBV9S1A1TA0A576 ZNF264-202ENST00000536056 2078 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
TCRBV9S1A1TA0A576 AC106820.2-201ENST00000563775 3264 ntBASIC18.24■□□□□ 0.51
TCRBV9S1A1TA0A576 BDKRB1-202ENST00000553356 1526 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
TCRBV9S1A1TA0A576 WDFY4-202ENST00000360890 2193 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
TCRBV9S1A1TA0A576 WT1-201ENST00000332351 3122 ntAPPRIS ALT2 TSL 1 (best) BASIC18.24■□□□□ 0.51
TCRBV9S1A1TA0A576 UNC93B2-201ENST00000285383 730 ntBASIC18.24■□□□□ 0.51
TCRBV9S1A1TA0A576 AL050404.1-201ENST00000424566 802 ntTSL 2 BASIC18.24■□□□□ 0.51
TCRBV9S1A1TA0A576 LINC01063-201ENST00000441644 348 ntTSL 3 BASIC18.24■□□□□ 0.51
TCRBV9S1A1TA0A576 CCR12P-201ENST00000446203 998 ntBASIC18.24■□□□□ 0.51
TCRBV9S1A1TA0A576 BCL7B-206ENST00000455335 985 ntTSL 3 BASIC18.24■□□□□ 0.51
TCRBV9S1A1TA0A576 AL139246.2-201ENST00000456687 1297 ntTSL 5 BASIC18.24■□□□□ 0.51
TCRBV9S1A1TA0A576 DUTP2-201ENST00000519164 463 ntBASIC18.24■□□□□ 0.51
TCRBV9S1A1TA0A576 ERI1-203ENST00000519292 2107 ntAPPRIS P1 TSL 2 BASIC18.24■□□□□ 0.51
TCRBV9S1A1TA0A576 TNFRSF1B-204ENST00000536782 557 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
TCRBV9S1A1TA0A576 BX088651.1-201ENST00000540551 451 ntBASIC18.24■□□□□ 0.51
TCRBV9S1A1TA0A576 ETFA-216ENST00000560726 942 ntTSL 3 BASIC18.24■□□□□ 0.51
TCRBV9S1A1TA0A576 PCDHAC2-201ENST00000289269 5963 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
TCRBV9S1A1TA0A576 NSFL1C-206ENST00000476071 2800 ntTSL 5 BASIC18.24■□□□□ 0.51
TCRBV9S1A1TA0A576 FAM110A-202ENST00000304189 1856 ntAPPRIS P1 TSL 2 BASIC18.24■□□□□ 0.51
TCRBV9S1A1TA0A576 ATP1B1-201ENST00000367815 1883 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
TCRBV9S1A1TA0A576 PRKAG1-206ENST00000548065 2071 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
TCRBV9S1A1TA0A576 KIAA1324L-207ENST00000444627 3527 ntTSL 5 BASIC18.24■□□□□ 0.51
TCRBV9S1A1TA0A576 PRPF19-201ENST00000227524 2157 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
TCRBV9S1A1TA0A576 ADAMTS17-201ENST00000268070 6207 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
TCRBV9S1A1TA0A576 FBXW9-203ENST00000587955 1437 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
TCRBV9S1A1TA0A576 FAM3A-204ENST00000369643 1521 ntAPPRIS P1 TSL 2 BASIC18.23■□□□□ 0.51
TCRBV9S1A1TA0A576 SIGIRR-201ENST00000332725 1639 ntAPPRIS P1 TSL 2 BASIC18.23■□□□□ 0.51
TCRBV9S1A1TA0A576 SSB-201ENST00000260956 1709 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
TCRBV9S1A1TA0A576 A4GALT-202ENST00000381278 1935 ntAPPRIS P1 TSL 5 BASIC18.23■□□□□ 0.51
TCRBV9S1A1TA0A576 C11orf58-201ENST00000228136 2049 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
TCRBV9S1A1TA0A576 ODF2-204ENST00000372814 2249 ntTSL 2 BASIC18.23■□□□□ 0.51
TCRBV9S1A1TA0A576 UBL3-201ENST00000380680 4384 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
TCRBV9S1A1TA0A576 GDF7-201ENST00000272224 9749 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
TCRBV9S1A1TA0A576 PPIF-201ENST00000225174 2190 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
TCRBV9S1A1TA0A576 SLC9A1-203ENST00000374086 2183 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
TCRBV9S1A1TA0A576 SAMD11-214ENST00000618323 2159 ntTSL 5 BASIC18.23■□□□□ 0.51
TCRBV9S1A1TA0A576 LUC7L-202ENST00000337351 2097 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
TCRBV9S1A1TA0A576 PEX14-201ENST00000356607 1985 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
TCRBV9S1A1TA0A576 SEMA3B-202ENST00000418576 1765 ntTSL 2 BASIC18.23■□□□□ 0.51
TCRBV9S1A1TA0A576 CASKIN2-201ENST00000321617 5015 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
TCRBV9S1A1TA0A576 POFUT2-201ENST00000331343 4825 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
TCRBV9S1A1TA0A576 FMR1-205ENST00000370475 4308 ntAPPRIS P3 TSL 1 (best) BASIC18.23■□□□□ 0.51
TCRBV9S1A1TA0A576 CAPN10-202ENST00000270364 1267 ntTSL 2 BASIC18.23■□□□□ 0.51
TCRBV9S1A1TA0A576 MED4-202ENST00000378586 931 ntAPPRIS ALT2 TSL 2 BASIC18.23■□□□□ 0.51
TCRBV9S1A1TA0A576 TMSB4X-201ENST00000380633 495 ntAPPRIS P1 TSL 3 BASIC18.23■□□□□ 0.51
TCRBV9S1A1TA0A576 AL390728.5-201ENST00000428687 706 ntTSL 3 BASIC18.23■□□□□ 0.51
TCRBV9S1A1TA0A576 LTB-210ENST00000429299 897 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
TCRBV9S1A1TA0A576 AC007663.1-201ENST00000438948 1240 ntBASIC18.23■□□□□ 0.51
TCRBV9S1A1TA0A576 PHB2-202ENST00000440277 996 ntTSL 5 BASIC18.23■□□□□ 0.51
TCRBV9S1A1TA0A576 AL445472.1-201ENST00000452532 1007 ntTSL 2 BASIC18.23■□□□□ 0.51
TCRBV9S1A1TA0A576 TMEM185A-204ENST00000507237 903 ntTSL 2 BASIC18.23■□□□□ 0.51
Retrieved 100 of 98,524 protein–RNA pairs in 27.7 ms