Protein–RNA interactions for Protein: Q9Y5S2

CDC42BPB, Serine/threonine-protein kinase MRCK beta, humanhuman

Predictions only

Length 1,711 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPBQ9Y5S2 REEP2-201ENST00000254901 2099 ntAPPRIS P3 TSL 1 (best) BASIC27.29■■□□□ 1.96
CDC42BPBQ9Y5S2 ADM-208ENST00000534464 1640 ntTSL 2 BASIC27.29■■□□□ 1.96
CDC42BPBQ9Y5S2 TMEM109-201ENST00000227525 2413 ntAPPRIS P1 TSL 1 (best) BASIC27.28■■□□□ 1.96
CDC42BPBQ9Y5S2 BSN-AS2-201ENST00000421598 2603 ntTSL 2 BASIC27.28■■□□□ 1.96
CDC42BPBQ9Y5S2 DUOXA1-201ENST00000267803 1996 ntTSL 1 (best) BASIC27.28■■□□□ 1.96
CDC42BPBQ9Y5S2 FIP1L1-202ENST00000337488 2198 ntTSL 1 (best) BASIC27.28■■□□□ 1.96
CDC42BPBQ9Y5S2 AC097374.2-201ENST00000618617 1306 ntBASIC27.28■■□□□ 1.96
CDC42BPBQ9Y5S2 CLDN15-208ENST00000611078 1509 ntTSL 5 BASIC27.28■■□□□ 1.96
CDC42BPBQ9Y5S2 IDH3G-202ENST00000370092 1712 ntTSL 5 BASIC27.28■■□□□ 1.96
CDC42BPBQ9Y5S2 TMEM147-201ENST00000222284 899 ntAPPRIS P1 TSL 1 (best) BASIC27.28■■□□□ 1.96
CDC42BPBQ9Y5S2 HELT-201ENST00000338875 1008 ntTSL 1 (best) BASIC27.28■■□□□ 1.96
CDC42BPBQ9Y5S2 CENPM-203ENST00000402338 1002 ntTSL 2 BASIC27.28■■□□□ 1.96
CDC42BPBQ9Y5S2 LEKR1-211ENST00000498839 616 ntTSL 3 BASIC27.28■■□□□ 1.96
CDC42BPBQ9Y5S2 ATP6V0C-202ENST00000564973 1081 ntTSL 2 BASIC27.28■■□□□ 1.96
CDC42BPBQ9Y5S2 MCCC2-209ENST00000629193 1128 ntTSL 1 (best) BASIC27.28■■□□□ 1.96
CDC42BPBQ9Y5S2 NEK3-208ENST00000618534 2414 ntAPPRIS P2 TSL 5 BASIC27.28■■□□□ 1.96
CDC42BPBQ9Y5S2 JMJD6-202ENST00000397625 1603 ntAPPRIS P1 TSL 1 (best) BASIC27.28■■□□□ 1.96
CDC42BPBQ9Y5S2 AC104581.1-201ENST00000324348 2852 ntAPPRIS P1 TSL 2 BASIC27.28■■□□□ 1.96
CDC42BPBQ9Y5S2 SAMD11-211ENST00000616125 2230 ntAPPRIS ALT2 TSL 5 BASIC27.28■■□□□ 1.96
CDC42BPBQ9Y5S2 ZNF397-204ENST00000585800 2046 ntTSL 5 BASIC27.28■■□□□ 1.96
CDC42BPBQ9Y5S2 PELI3-201ENST00000320740 2740 ntTSL 1 (best) BASIC27.28■■□□□ 1.96
CDC42BPBQ9Y5S2 RAC1-201ENST00000348035 2323 ntAPPRIS P1 TSL 1 (best) BASIC27.27■■□□□ 1.96
CDC42BPBQ9Y5S2 RARRES1-201ENST00000237696 1952 ntAPPRIS P1 TSL 1 (best) BASIC27.27■■□□□ 1.96
CDC42BPBQ9Y5S2 PAN3-201ENST00000380958 2833 ntAPPRIS P2 TSL 5 BASIC27.27■■□□□ 1.96
CDC42BPBQ9Y5S2 OARD1-201ENST00000373154 1129 ntTSL 1 (best) BASIC27.27■■□□□ 1.96
CDC42BPBQ9Y5S2 KLF4P1-201ENST00000412782 1185 ntBASIC27.27■■□□□ 1.96
CDC42BPBQ9Y5S2 AC211486.1-202ENST00000416371 468 ntBASIC27.27■■□□□ 1.96
CDC42BPBQ9Y5S2 USP30-AS1-201ENST00000478808 656 ntTSL 2 BASIC27.27■■□□□ 1.96
CDC42BPBQ9Y5S2 AC211476.1-201ENST00000503899 468 ntBASIC27.27■■□□□ 1.96
CDC42BPBQ9Y5S2 MIR3687-2-201ENST00000577708 61 ntBASIC27.27■■□□□ 1.96
CDC42BPBQ9Y5S2 AC004817.3-201ENST00000602957 2129 ntBASIC27.27■■□□□ 1.96
CDC42BPBQ9Y5S2 MIR3687-1-201ENST00000614492 61 ntBASIC27.27■■□□□ 1.96
CDC42BPBQ9Y5S2 D2HGDH-201ENST00000321264 2617 ntAPPRIS P1 TSL 1 (best) BASIC27.27■■□□□ 1.96
CDC42BPBQ9Y5S2 GNB1-201ENST00000378609 3132 ntAPPRIS P1 TSL 1 (best) BASIC27.27■■□□□ 1.96
CDC42BPBQ9Y5S2 UQCC3-201ENST00000377953 1947 ntAPPRIS P1 TSL 1 (best) BASIC27.27■■□□□ 1.96
CDC42BPBQ9Y5S2 EPDR1-201ENST00000199448 2599 ntAPPRIS P3 TSL 1 (best) BASIC27.27■■□□□ 1.96
CDC42BPBQ9Y5S2 DMRTA2-202ENST00000418121 2840 ntAPPRIS P1 TSL 1 (best) BASIC27.27■■□□□ 1.96
CDC42BPBQ9Y5S2 CDC42EP1-201ENST00000249014 2181 ntAPPRIS P2 TSL 1 (best) BASIC27.27■■□□□ 1.96
CDC42BPBQ9Y5S2 PTGES2-AS1-201ENST00000443493 2100 ntBASIC27.27■■□□□ 1.96
CDC42BPBQ9Y5S2 HMGCLL1-202ENST00000308161 1314 ntTSL 2 BASIC27.27■■□□□ 1.96
CDC42BPBQ9Y5S2 CCDC78-201ENST00000293889 1611 ntAPPRIS P2 TSL 1 (best) BASIC27.27■■□□□ 1.96
CDC42BPBQ9Y5S2 ZNF561-AS1-204ENST00000587536 1799 ntTSL 2 BASIC27.27■■□□□ 1.96
CDC42BPBQ9Y5S2 SLC3A2-206ENST00000535296 2084 ntTSL 5 BASIC27.27■■□□□ 1.96
CDC42BPBQ9Y5S2 C11orf58-201ENST00000228136 2049 ntAPPRIS P1 TSL 1 (best) BASIC27.27■■□□□ 1.96
CDC42BPBQ9Y5S2 HSD17B8-203ENST00000374662 990 ntAPPRIS P1 TSL 1 (best) BASIC27.27■■□□□ 1.96
CDC42BPBQ9Y5S2 C6orf48-203ENST00000375638 847 ntAPPRIS P1 TSL 2 BASIC27.27■■□□□ 1.96
CDC42BPBQ9Y5S2 C6orf48-207ENST00000375642 962 ntAPPRIS P1 TSL 2 BASIC27.27■■□□□ 1.96
CDC42BPBQ9Y5S2 COLEC11-206ENST00000403096 1557 ntTSL 1 (best) BASIC27.27■■□□□ 1.96
CDC42BPBQ9Y5S2 SNHG11-204ENST00000420006 720 ntTSL 3 BASIC27.27■■□□□ 1.96
CDC42BPBQ9Y5S2 SNHG11-206ENST00000432153 1181 ntTSL 3 BASIC27.27■■□□□ 1.96
CDC42BPBQ9Y5S2 ZFPM1-204ENST00000563351 808 ntTSL 2 BASIC27.27■■□□□ 1.96
CDC42BPBQ9Y5S2 COX5A-206ENST00000568783 571 ntTSL 3 BASIC27.27■■□□□ 1.96
CDC42BPBQ9Y5S2 NAGPA-AS1-202ENST00000632058 2265 ntTSL 2 BASIC27.27■■□□□ 1.96
CDC42BPBQ9Y5S2 TMEM250-205ENST00000561457 2804 ntAPPRIS P1 TSL 2 BASIC27.26■■□□□ 1.96
CDC42BPBQ9Y5S2 STIM2-211ENST00000639195 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC27.26■■□□□ 1.95
CDC42BPBQ9Y5S2 AZIN2-203ENST00000373441 1443 ntTSL 1 (best) BASIC27.26■■□□□ 1.95
CDC42BPBQ9Y5S2 U2AF2-202ENST00000450554 3022 ntAPPRIS ALT1 TSL 1 (best) BASIC27.26■■□□□ 1.95
CDC42BPBQ9Y5S2 GYG2P1-204ENST00000382966 639 ntTSL 3 BASIC27.26■■□□□ 1.95
CDC42BPBQ9Y5S2 HYAL1-206ENST00000447605 666 ntTSL 1 (best) BASIC27.26■■□□□ 1.95
CDC42BPBQ9Y5S2 AC127496.4-201ENST00000571591 549 ntTSL 4 BASIC27.26■■□□□ 1.95
CDC42BPBQ9Y5S2 MTDHP5-201ENST00000598980 586 ntBASIC27.26■■□□□ 1.95
CDC42BPBQ9Y5S2 PGM5P2-202ENST00000637225 1043 ntBASIC27.26■■□□□ 1.95
CDC42BPBQ9Y5S2 MBD1-216ENST00000587605 1945 ntTSL 2 BASIC27.26■■□□□ 1.95
CDC42BPBQ9Y5S2 FGFBP2-201ENST00000259989 1168 ntAPPRIS P1 TSL 1 (best) BASIC27.25■■□□□ 1.95
CDC42BPBQ9Y5S2 RFXANK-203ENST00000407360 1212 ntAPPRIS P1 TSL 1 (best) BASIC27.25■■□□□ 1.95
CDC42BPBQ9Y5S2 AL135791.1-201ENST00000429214 826 ntTSL 5 BASIC27.25■■□□□ 1.95
CDC42BPBQ9Y5S2 TCAP-202ENST00000578283 583 ntTSL 5 BASIC27.25■■□□□ 1.95
CDC42BPBQ9Y5S2 ELOF1-204ENST00000587806 1172 ntTSL 2 BASIC27.25■■□□□ 1.95
CDC42BPBQ9Y5S2 BAIAP2L2-201ENST00000332536 2065 ntAPPRIS ALT2 TSL 5 BASIC27.25■■□□□ 1.95
CDC42BPBQ9Y5S2 AL353593.2-201ENST00000602529 1483 ntBASIC27.25■■□□□ 1.95
CDC42BPBQ9Y5S2 PRRT4-207ENST00000535159 2897 ntAPPRIS P1 TSL 5 BASIC27.25■■□□□ 1.95
CDC42BPBQ9Y5S2 GPAT2P1-202ENST00000471661 1569 ntTSL 2 BASIC27.25■■□□□ 1.95
CDC42BPBQ9Y5S2 ZNF296-201ENST00000303809 1744 ntAPPRIS P2 TSL 1 (best) BASIC27.24■■□□□ 1.95
CDC42BPBQ9Y5S2 REEP4-201ENST00000306306 1710 ntAPPRIS P1 TSL 1 (best) BASIC27.24■■□□□ 1.95
CDC42BPBQ9Y5S2 LPAR3-201ENST00000370611 1720 ntAPPRIS P1 TSL 1 (best) BASIC27.24■■□□□ 1.95
CDC42BPBQ9Y5S2 ATPIF1-201ENST00000335514 494 ntAPPRIS P1 TSL 1 (best) BASIC27.24■■□□□ 1.95
CDC42BPBQ9Y5S2 AL391650.1-205ENST00000433939 579 ntAPPRIS P1 TSL 3 BASIC27.24■■□□□ 1.95
CDC42BPBQ9Y5S2 CD244-202ENST00000368033 1360 ntAPPRIS ALT2 TSL 1 (best) BASIC27.24■■□□□ 1.95
CDC42BPBQ9Y5S2 ALDH2-202ENST00000416293 1572 ntTSL 2 BASIC27.24■■□□□ 1.95
CDC42BPBQ9Y5S2 NOTCH2NL-204ENST00000579793 1954 ntAPPRIS ALT2 TSL 2 BASIC27.24■■□□□ 1.95
CDC42BPBQ9Y5S2 PITPNB-205ENST00000455418 2963 ntAPPRIS ALT1 TSL 5 BASIC27.24■■□□□ 1.95
CDC42BPBQ9Y5S2 NUDC-201ENST00000321265 1800 ntAPPRIS P1 TSL 1 (best) BASIC27.24■■□□□ 1.95
CDC42BPBQ9Y5S2 FDXR-205ENST00000544854 1827 ntTSL 2 BASIC27.24■■□□□ 1.95
CDC42BPBQ9Y5S2 PNRC2-202ENST00000374468 814 ntAPPRIS P1 TSL 2 BASIC27.24■■□□□ 1.95
CDC42BPBQ9Y5S2 LBH-203ENST00000404397 543 ntTSL 4 BASIC27.24■■□□□ 1.95
CDC42BPBQ9Y5S2 SUMO2P17-202ENST00000508743 738 ntTSL 3 BASIC27.24■■□□□ 1.95
CDC42BPBQ9Y5S2 EFCAB1-209ENST00000523092 648 ntTSL 2 BASIC27.24■■□□□ 1.95
CDC42BPBQ9Y5S2 AC018845.2-201ENST00000568326 409 ntBASIC27.24■■□□□ 1.95
CDC42BPBQ9Y5S2 AC008403.2-204ENST00000600650 1006 ntTSL 3 BASIC27.24■■□□□ 1.95
CDC42BPBQ9Y5S2 AC027612.4-201ENST00000605371 583 ntBASIC27.24■■□□□ 1.95
CDC42BPBQ9Y5S2 ZIC3-202ENST00000370606 1968 ntTSL 5 BASIC27.24■■□□□ 1.95
CDC42BPBQ9Y5S2 CDCP2-202ENST00000530059 1623 ntAPPRIS ALT2 TSL 5 BASIC27.23■■□□□ 1.95
CDC42BPBQ9Y5S2 CBLC-202ENST00000341505 1441 ntTSL 1 (best) BASIC27.23■■□□□ 1.95
CDC42BPBQ9Y5S2 NCF1C-201ENST00000438382 1427 ntBASIC27.23■■□□□ 1.95
CDC42BPBQ9Y5S2 OGFOD2-201ENST00000228922 1780 ntAPPRIS P1 TSL 1 (best) BASIC27.23■■□□□ 1.95
CDC42BPBQ9Y5S2 PHYHD1-201ENST00000308941 1599 ntTSL 1 (best) BASIC27.23■■□□□ 1.95
CDC42BPBQ9Y5S2 AC016999.1-201ENST00000447880 452 ntTSL 3 BASIC27.23■■□□□ 1.95
CDC42BPBQ9Y5S2 FBF1-204ENST00000586631 621 ntAPPRIS ALT2 TSL 2 BASIC27.23■■□□□ 1.95
CDC42BPBQ9Y5S2 POLE2-202ENST00000539565 1792 ntTSL 1 (best) BASIC27.23■■□□□ 1.95
CDC42BPBQ9Y5S2 CCDC7-203ENST00000362006 2133 ntAPPRIS P2 TSL 1 (best) BASIC27.23■■□□□ 1.95
Retrieved 100 of 98,524 protein–RNA pairs in 31 ms