Protein–RNA interactions for Protein: Q9NX63

CHCHD3, MICOS complex subunit MIC19, humanhuman

Known RBP Predictions only

Length 227 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHCHD3Q9NX63 PICALM-204ENST00000526033 3613 ntAPPRIS ALT1 TSL 1 (best) BASIC16.92■□□□□ 0.3
CHCHD3Q9NX63 SH3BP4-201ENST00000344528 5044 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
CHCHD3Q9NX63 SARAF-214ENST00000545648 1976 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
CHCHD3Q9NX63 CPZ-201ENST00000315782 2136 ntAPPRIS P3 TSL 1 (best) BASIC16.92■□□□□ 0.3
CHCHD3Q9NX63 LCE2A-201ENST00000368779 592 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
CHCHD3Q9NX63 NCF1B-202ENST00000432102 930 ntTSL 2 BASIC16.92■□□□□ 0.3
CHCHD3Q9NX63 FAM229A-204ENST00000432622 699 ntAPPRIS P2 TSL 2 BASIC16.92■□□□□ 0.3
CHCHD3Q9NX63 TUBB8P6-201ENST00000436895 1288 ntBASIC16.92■□□□□ 0.3
CHCHD3Q9NX63 AC092143.4-201ENST00000570217 559 ntTSL 4 BASIC16.92■□□□□ 0.3
CHCHD3Q9NX63 HLA-G-205ENST00000428701 1578 ntAPPRIS P2 BASIC16.92■□□□□ 0.3
CHCHD3Q9NX63 SNX24-211ENST00000513881 1563 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
CHCHD3Q9NX63 PCDH10-201ENST00000264360 8489 ntAPPRIS P3 TSL 1 (best) BASIC16.92■□□□□ 0.3
CHCHD3Q9NX63 CYP2F1-201ENST00000331105 1720 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
CHCHD3Q9NX63 CD68-201ENST00000250092 1878 ntAPPRIS P3 TSL 1 (best) BASIC16.92■□□□□ 0.3
CHCHD3Q9NX63 KRT16P6-201ENST00000417510 1873 ntTSL 5 BASIC16.92■□□□□ 0.3
CHCHD3Q9NX63 FUCA1-201ENST00000374479 2047 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
CHCHD3Q9NX63 CTSL-203ENST00000343150 2177 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
CHCHD3Q9NX63 PCDHA12-201ENST00000398631 5233 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
CHCHD3Q9NX63 MAP3K8-207ENST00000542547 2782 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
CHCHD3Q9NX63 OGFRL1-201ENST00000370435 8391 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
CHCHD3Q9NX63 RHBDL1-202ENST00000352681 1463 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
CHCHD3Q9NX63 C1orf210-202ENST00000523677 1478 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
CHCHD3Q9NX63 SUPT4H1-202ENST00000577396 1643 ntTSL 2 BASIC16.92■□□□□ 0.3
CHCHD3Q9NX63 NOX4-201ENST00000263317 2388 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
CHCHD3Q9NX63 INPP5A-203ENST00000368594 2967 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
CHCHD3Q9NX63 STIM2-203ENST00000467011 3925 ntAPPRIS ALT2 TSL 1 (best) BASIC16.91■□□□□ 0.3
CHCHD3Q9NX63 ZNF416-201ENST00000196489 2561 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
CHCHD3Q9NX63 POC1A-202ENST00000394970 1999 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
CHCHD3Q9NX63 SPERT-202ENST00000378966 1842 ntAPPRIS ALT2 TSL 1 (best) BASIC16.91■□□□□ 0.3
CHCHD3Q9NX63 OLFM2-203ENST00000590841 1665 ntTSL 2 BASIC16.91■□□□□ 0.3
CHCHD3Q9NX63 NDUFA6-AS1-203ENST00000439129 2950 ntTSL 5 BASIC16.91■□□□□ 0.3
CHCHD3Q9NX63 NR2F1-205ENST00000615873 1427 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
CHCHD3Q9NX63 RGPD8-201ENST00000302558 5576 ntAPPRIS P2 TSL 1 (best) BASIC16.91■□□□□ 0.3
CHCHD3Q9NX63 METTL23-201ENST00000341249 1155 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
CHCHD3Q9NX63 MFF-205ENST00000354503 1085 ntTSL 2 BASIC16.91■□□□□ 0.3
CHCHD3Q9NX63 HES2-203ENST00000377837 1222 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
CHCHD3Q9NX63 SPOCK2-203ENST00000412663 1284 ntTSL 5 BASIC16.91■□□□□ 0.3
CHCHD3Q9NX63 SERPINH1P1-201ENST00000419794 1249 ntBASIC16.91■□□□□ 0.3
CHCHD3Q9NX63 METTL21A-207ENST00000442521 1003 ntAPPRIS P1 TSL 2 BASIC16.91■□□□□ 0.3
CHCHD3Q9NX63 AC093787.1-201ENST00000450396 207 ntBASIC16.91■□□□□ 0.3
CHCHD3Q9NX63 IDNK-204ENST00000454393 1210 ntTSL 3 BASIC16.91■□□□□ 0.3
CHCHD3Q9NX63 RPS2P52-201ENST00000469610 820 ntBASIC16.91■□□□□ 0.3
CHCHD3Q9NX63 BEAN1-AS1-201ENST00000564618 533 ntTSL 4 BASIC16.91■□□□□ 0.3
CHCHD3Q9NX63 CAPNS1-205ENST00000588780 1035 ntAPPRIS ALT2 TSL 5 BASIC16.91■□□□□ 0.3
CHCHD3Q9NX63 PRAG1-202ENST00000622241 4639 ntAPPRIS P1 TSL 2 BASIC16.91■□□□□ 0.3
CHCHD3Q9NX63 LRRC57-204ENST00000563454 2407 ntAPPRIS P1 TSL 2 BASIC16.91■□□□□ 0.3
CHCHD3Q9NX63 EDN3-202ENST00000337938 2636 ntAPPRIS P4 TSL 1 (best) BASIC16.91■□□□□ 0.3
CHCHD3Q9NX63 CLSTN1-201ENST00000361311 4647 ntAPPRIS P3 TSL 1 (best) BASIC16.91■□□□□ 0.3
CHCHD3Q9NX63 EXOSC3-201ENST00000327304 1806 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
CHCHD3Q9NX63 PYCR1-204ENST00000403172 1811 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
CHCHD3Q9NX63 LENG8-209ENST00000616932 2825 ntAPPRIS ALT2 TSL 5 BASIC16.91■□□□□ 0.3
CHCHD3Q9NX63 DOLPP1-202ENST00000372546 2177 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
CHCHD3Q9NX63 PCBP4-202ENST00000355852 2015 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
CHCHD3Q9NX63 COX10-201ENST00000261643 2873 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
CHCHD3Q9NX63 ZNF496-201ENST00000294753 5336 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
CHCHD3Q9NX63 SHISA6-204ENST00000441885 7575 ntAPPRIS P3 TSL 5 BASIC16.9■□□□□ 0.3
CHCHD3Q9NX63 FGF17-201ENST00000359441 1714 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
CHCHD3Q9NX63 MCOLN1-201ENST00000264079 2082 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
CHCHD3Q9NX63 TMEM184A-201ENST00000297477 6276 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
CHCHD3Q9NX63 CASK-203ENST00000378163 4411 ntAPPRIS ALT1 TSL 5 BASIC16.9■□□□□ 0.3
CHCHD3Q9NX63 GLDC-201ENST00000321612 3900 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
CHCHD3Q9NX63 NEIL2-204ENST00000455213 2323 ntAPPRIS P1 TSL 5 BASIC16.9■□□□□ 0.3
CHCHD3Q9NX63 LRRC23-201ENST00000007969 1615 ntAPPRIS P4 TSL 1 (best) BASIC16.9■□□□□ 0.3
CHCHD3Q9NX63 NOVA2-201ENST00000263257 7803 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
CHCHD3Q9NX63 HACD1-201ENST00000326961 773 ntTSL 2 BASIC16.9■□□□□ 0.3
CHCHD3Q9NX63 CENPVL3-201ENST00000417339 864 ntAPPRIS P1 BASIC16.9■□□□□ 0.3
CHCHD3Q9NX63 ATE1-AS1-201ENST00000437593 951 ntTSL 2 BASIC16.9■□□□□ 0.3
CHCHD3Q9NX63 AC016065.1-203ENST00000523225 1017 ntTSL 3 BASIC16.9■□□□□ 0.3
CHCHD3Q9NX63 ZNF263-205ENST00000574253 1139 ntTSL 2 BASIC16.9■□□□□ 0.3
CHCHD3Q9NX63 MDK-213ENST00000617138 635 ntTSL 2 BASIC16.9■□□□□ 0.3
CHCHD3Q9NX63 C6orf118-201ENST00000230301 1812 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
CHCHD3Q9NX63 FBXO21-208ENST00000622495 6040 ntAPPRIS ALT1 TSL 1 (best) BASIC16.9■□□□□ 0.3
CHCHD3Q9NX63 PDPK2P-201ENST00000382326 2387 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
CHCHD3Q9NX63 DIABLO-208ENST00000464942 2569 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
CHCHD3Q9NX63 CACFD1-202ENST00000316948 2794 ntAPPRIS P3 TSL 1 (best) BASIC16.9■□□□□ 0.3
CHCHD3Q9NX63 AGK-211ENST00000629555 2765 ntTSL 5 BASIC16.9■□□□□ 0.3
CHCHD3Q9NX63 RDH10-201ENST00000240285 3949 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
CHCHD3Q9NX63 TTBK1-201ENST00000259750 6932 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
CHCHD3Q9NX63 PHB2-201ENST00000399433 1308 ntAPPRIS ALT1 TSL 2 BASIC16.9■□□□□ 0.3
CHCHD3Q9NX63 KCNA2-206ENST00000638477 1524 ntTSL 5 BASIC16.9■□□□□ 0.3
CHCHD3Q9NX63 PRPF40B-201ENST00000261897 3602 ntAPPRIS ALT2 TSL 1 (best) BASIC16.9■□□□□ 0.3
CHCHD3Q9NX63 SIPA1-201ENST00000394224 3628 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
CHCHD3Q9NX63 BCAR1-202ENST00000393420 2667 ntTSL 5 BASIC16.9■□□□□ 0.3
CHCHD3Q9NX63 ISY1-201ENST00000273541 1704 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
CHCHD3Q9NX63 CNTRL-208ENST00000373865 1917 ntTSL 5 BASIC16.9■□□□□ 0.3
CHCHD3Q9NX63 SUSD4-202ENST00000343846 3480 ntAPPRIS P1 TSL 2 BASIC16.9■□□□□ 0.3
CHCHD3Q9NX63 GCSH-208ENST00000639169 2537 ntTSL 2 BASIC16.9■□□□□ 0.3
CHCHD3Q9NX63 ARHGAP4-204ENST00000393721 2721 ntTSL 5 BASIC16.9■□□□□ 0.3
CHCHD3Q9NX63 USP2-202ENST00000455332 2903 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
CHCHD3Q9NX63 C5orf30-203ENST00000515669 1573 ntAPPRIS P1 TSL 3 BASIC16.89■□□□□ 0.3
CHCHD3Q9NX63 SAAL1-202ENST00000524803 1582 ntAPPRIS P2 TSL 1 (best) BASIC16.89■□□□□ 0.3
CHCHD3Q9NX63 MTERF2-202ENST00000392830 1763 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.3
CHCHD3Q9NX63 AC063977.6-201ENST00000600074 1763 ntTSL 1 (best) BASIC16.89■□□□□ 0.3
CHCHD3Q9NX63 IFRD1-201ENST00000005558 1834 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
CHCHD3Q9NX63 ST3GAL2-201ENST00000342907 4450 ntAPPRIS P1 TSL 5 BASIC16.89■□□□□ 0.29
CHCHD3Q9NX63 SERINC2-205ENST00000536384 2062 ntTSL 2 BASIC16.89■□□□□ 0.29
CHCHD3Q9NX63 SPIDR-227ENST00000541342 3311 ntAPPRIS ALT2 TSL 2 BASIC16.89■□□□□ 0.29
CHCHD3Q9NX63 PRR23B-201ENST00000329447 1896 ntAPPRIS P1 BASIC16.89■□□□□ 0.29
CHCHD3Q9NX63 TYMS-203ENST00000323274 1662 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
CHCHD3Q9NX63 TNFRSF10A-201ENST00000221132 2714 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Retrieved 100 of 98,524 protein–RNA pairs in 41.8 ms