Protein–RNA interactions for Protein: Q9NUG4

CCM2L, Cerebral cavernous malformations 2 protein-like, humanhuman

Predicted RBP Predictions only

Length 571 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2LQ9NUG4 AC145285.6-201ENST00000604632 637 ntBASIC17.3■□□□□ 0.36
CCM2LQ9NUG4 SMIM20-205ENST00000614775 1190 ntTSL 5 BASIC17.3■□□□□ 0.36
CCM2LQ9NUG4 ACADVL-205ENST00000543245 2227 ntTSL 2 BASIC17.3■□□□□ 0.36
CCM2LQ9NUG4 RBPJL-201ENST00000343694 2489 ntAPPRIS P3 TSL 1 (best) BASIC17.3■□□□□ 0.36
CCM2LQ9NUG4 ZNF668-201ENST00000300849 2762 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
CCM2LQ9NUG4 RAB11FIP2-202ENST00000369199 6119 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
CCM2LQ9NUG4 GPR20-201ENST00000377741 1515 ntAPPRIS P1 TSL 3 BASIC17.3■□□□□ 0.36
CCM2LQ9NUG4 ST6GALNAC6-202ENST00000373141 2424 ntAPPRIS ALT1 TSL 2 BASIC17.3■□□□□ 0.36
CCM2LQ9NUG4 PPP2R5B-201ENST00000164133 2745 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
CCM2LQ9NUG4 PTPA-203ENST00000348141 2737 ntTSL 5 BASIC17.3■□□□□ 0.36
CCM2LQ9NUG4 PTPA-207ENST00000393370 2737 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
CCM2LQ9NUG4 LUC7L-202ENST00000337351 2097 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
CCM2LQ9NUG4 EEF1AKMT2-201ENST00000368836 1462 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
CCM2LQ9NUG4 GLB1-202ENST00000307377 2018 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
CCM2LQ9NUG4 ADAMTS7-201ENST00000388820 5490 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
CCM2LQ9NUG4 SERPINE2-206ENST00000447280 1716 ntTSL 2 BASIC17.3■□□□□ 0.36
CCM2LQ9NUG4 KAZN-203ENST00000376030 6030 ntAPPRIS P1 TSL 5 BASIC17.3■□□□□ 0.36
CCM2LQ9NUG4 PCDH7-206ENST00000543491 4457 ntAPPRIS ALT2 BASIC17.29■□□□□ 0.36
CCM2LQ9NUG4 MUM1-216ENST00000627377 2235 ntAPPRIS ALT2 TSL 5 BASIC17.29■□□□□ 0.36
CCM2LQ9NUG4 RASA4-202ENST00000449970 2787 ntAPPRIS ALT1 TSL 2 BASIC17.29■□□□□ 0.36
CCM2LQ9NUG4 DSCAM-201ENST00000400454 8552 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
CCM2LQ9NUG4 GUCA1A-205ENST00000541991 1921 ntTSL 5 BASIC17.29■□□□□ 0.36
CCM2LQ9NUG4 E2F2-201ENST00000361729 5191 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
CCM2LQ9NUG4 AL023806.1-201ENST00000603994 1649 ntBASIC17.29■□□□□ 0.36
CCM2LQ9NUG4 AUNIP-201ENST00000374298 2116 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
CCM2LQ9NUG4 HOXB8-201ENST00000239144 1823 ntAPPRIS P2 TSL 2 BASIC17.29■□□□□ 0.36
CCM2LQ9NUG4 BPGM-202ENST00000393132 2051 ntAPPRIS P1 TSL 5 BASIC17.29■□□□□ 0.36
CCM2LQ9NUG4 UBL3-201ENST00000380680 4384 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
CCM2LQ9NUG4 ATP5D-201ENST00000215375 997 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
CCM2LQ9NUG4 GAMT-201ENST00000252288 1121 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
CCM2LQ9NUG4 PTPRCAP-201ENST00000326294 1292 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
CCM2LQ9NUG4 FKBP2-202ENST00000394540 1002 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
CCM2LQ9NUG4 NELFE-206ENST00000444811 1202 ntAPPRIS ALT2 TSL 2 BASIC17.29■□□□□ 0.36
CCM2LQ9NUG4 MRPL36-202ENST00000505059 610 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
CCM2LQ9NUG4 AC026427.1-201ENST00000508993 555 ntTSL 3 BASIC17.29■□□□□ 0.36
CCM2LQ9NUG4 AF131216.3-201ENST00000525867 1099 ntTSL 2 BASIC17.29■□□□□ 0.36
CCM2LQ9NUG4 SLC52A2-205ENST00000526752 710 ntTSL 3 BASIC17.29■□□□□ 0.36
CCM2LQ9NUG4 FOSL1-204ENST00000532401 1132 ntTSL 2 BASIC17.29■□□□□ 0.36
CCM2LQ9NUG4 P4HB-223ENST00000576390 439 ntTSL 4 BASIC17.29■□□□□ 0.36
CCM2LQ9NUG4 AF186192.3-201ENST00000583427 947 ntBASIC17.29■□□□□ 0.36
CCM2LQ9NUG4 FXYD1-204ENST00000588081 645 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
CCM2LQ9NUG4 FP475955.1-201ENST00000624937 553 ntTSL 4 BASIC17.29■□□□□ 0.36
CCM2LQ9NUG4 TNFRSF1A-213ENST00000540022 1527 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
CCM2LQ9NUG4 LPAR2-201ENST00000407877 1791 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
CCM2LQ9NUG4 DOK4-201ENST00000340099 2772 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
CCM2LQ9NUG4 RAB17-201ENST00000264601 1966 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
CCM2LQ9NUG4 PPP1R7-202ENST00000272983 1954 ntTSL 2 BASIC17.29■□□□□ 0.36
CCM2LQ9NUG4 OSMR-202ENST00000502536 1740 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
CCM2LQ9NUG4 BTBD1-202ENST00000379403 1467 ntTSL 5 BASIC17.29■□□□□ 0.36
CCM2LQ9NUG4 EWSR1-222ENST00000629659 2446 ntTSL 5 BASIC17.29■□□□□ 0.36
CCM2LQ9NUG4 AP001094.4-201ENST00000579008 2176 ntBASIC17.29■□□□□ 0.36
CCM2LQ9NUG4 CLIC6-201ENST00000349499 3806 ntAPPRIS P3 TSL 1 (best) BASIC17.29■□□□□ 0.36
CCM2LQ9NUG4 TRAF3IP1-201ENST00000373327 4279 ntAPPRIS P3 TSL 1 (best) BASIC17.29■□□□□ 0.36
CCM2LQ9NUG4 TBC1D4-204ENST00000431480 6347 ntAPPRIS ALT2 TSL 1 (best) BASIC17.29■□□□□ 0.36
CCM2LQ9NUG4 DNAJA3-202ENST00000355296 2591 ntAPPRIS ALT1 TSL 1 (best) BASIC17.29■□□□□ 0.36
CCM2LQ9NUG4 GJA4-201ENST00000342280 1622 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
CCM2LQ9NUG4 RBM17-201ENST00000379888 2755 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
CCM2LQ9NUG4 ROPN1-209ENST00000495093 1376 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
CCM2LQ9NUG4 CPT2-210ENST00000637252 2739 ntTSL 5 BASIC17.28■□□□□ 0.36
CCM2LQ9NUG4 PCGF6-202ENST00000369847 2230 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
CCM2LQ9NUG4 PACSIN2-205ENST00000407585 3080 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
CCM2LQ9NUG4 TMEFF2-201ENST00000272771 2604 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
CCM2LQ9NUG4 MFSD2A-201ENST00000372809 2173 ntTSL 2 BASIC17.28■□□□□ 0.36
CCM2LQ9NUG4 TMEM110-201ENST00000355083 4769 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
CCM2LQ9NUG4 ANXA6-201ENST00000354546 2593 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
CCM2LQ9NUG4 NPFFR2-201ENST00000308744 1922 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
CCM2LQ9NUG4 HIBCH-201ENST00000359678 1939 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
CCM2LQ9NUG4 PRDM5-201ENST00000264808 5330 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
CCM2LQ9NUG4 PRDX5-201ENST00000265462 893 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
CCM2LQ9NUG4 SNCG-201ENST00000348795 684 ntTSL 2 BASIC17.28■□□□□ 0.36
CCM2LQ9NUG4 TBC1D2-202ENST00000375063 2100 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
CCM2LQ9NUG4 CRAT-202ENST00000393384 973 ntTSL 2 BASIC17.28■□□□□ 0.36
CCM2LQ9NUG4 IAH1-215ENST00000497473 1266 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
CCM2LQ9NUG4 EFTUD1P1-201ENST00000558187 596 ntTSL 4 BASIC17.28■□□□□ 0.36
CCM2LQ9NUG4 LRRC75A-AS1-225ENST00000581913 1091 ntTSL 2 BASIC17.28■□□□□ 0.36
CCM2LQ9NUG4 DECR2-212ENST00000627716 352 ntTSL 2 BASIC17.28■□□□□ 0.36
CCM2LQ9NUG4 ZGLP1-202ENST00000403903 2303 ntAPPRIS P2 TSL 1 (best) BASIC17.28■□□□□ 0.36
CCM2LQ9NUG4 TICAM1-202ENST00000621756 1650 ntTSL 5 BASIC17.28■□□□□ 0.36
CCM2LQ9NUG4 DACH1-202ENST00000613252 5233 ntAPPRIS P2 TSL 1 (best) BASIC17.28■□□□□ 0.36
CCM2LQ9NUG4 DLGAP1-222ENST00000639615 1898 ntTSL 5 BASIC17.28■□□□□ 0.36
CCM2LQ9NUG4 PAX7-201ENST00000375375 2260 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
CCM2LQ9NUG4 PRDM5-212ENST00000515109 2259 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
CCM2LQ9NUG4 RIN1-201ENST00000311320 2693 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
CCM2LQ9NUG4 CD8B-203ENST00000390655 1417 ntAPPRIS P2 TSL 1 (best) BASIC17.28■□□□□ 0.36
CCM2LQ9NUG4 KRT8P11-201ENST00000409686 1436 ntBASIC17.28■□□□□ 0.36
CCM2LQ9NUG4 CPAMD8-203ENST00000443236 5992 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
CCM2LQ9NUG4 NKILA-202ENST00000614771 2598 ntBASIC17.28■□□□□ 0.36
CCM2LQ9NUG4 PHGDH-209ENST00000641074 1780 ntBASIC17.28■□□□□ 0.36
CCM2LQ9NUG4 FBXL17-201ENST00000359660 4510 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
CCM2LQ9NUG4 SEL1L3-202ENST00000399878 4520 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
CCM2LQ9NUG4 GTF3A-201ENST00000381140 1383 ntAPPRIS ALT2 TSL 1 (best) BASIC17.28■□□□□ 0.36
CCM2LQ9NUG4 ALDH1A3-201ENST00000329841 3924 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
CCM2LQ9NUG4 ADGRG2-208ENST00000379873 4698 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
CCM2LQ9NUG4 SLC29A2-206ENST00000546034 2509 ntAPPRIS P1 TSL 5 BASIC17.27■□□□□ 0.36
CCM2LQ9NUG4 TBC1D3I-202ENST00000618620 1900 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
CCM2LQ9NUG4 COL9A1-201ENST00000320755 3059 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
CCM2LQ9NUG4 SNAPC3-207ENST00000610884 2453 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
CCM2LQ9NUG4 CRKL-201ENST00000354336 5325 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
CCM2LQ9NUG4 KCNQ1-201ENST00000155840 3245 ntAPPRIS P2 TSL 1 (best) BASIC17.27■□□□□ 0.36
CCM2LQ9NUG4 HSD11B1L-221ENST00000583928 1319 ntTSL 5 BASIC17.27■□□□□ 0.36
Retrieved 100 of 98,524 protein–RNA pairs in 43.8 ms