Protein–RNA interactions for Protein: Q9NRR5

UBQLN4, Ubiquilin-4, humanhuman

Predictions only

Length 601 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBQLN4Q9NRR5 AC113404.2-201ENST00000507884 177 ntBASIC16.71■□□□□ 0.27
UBQLN4Q9NRR5 AC087623.2-201ENST00000528407 534 ntTSL 4 BASIC16.71■□□□□ 0.27
UBQLN4Q9NRR5 AC099518.3-201ENST00000564808 809 ntAPPRIS P5 TSL 4 BASIC16.71■□□□□ 0.27
UBQLN4Q9NRR5 MAP3K14-AS1-202ENST00000585351 893 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
UBQLN4Q9NRR5 STK25-203ENST00000403346 2210 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
UBQLN4Q9NRR5 ACADVL-205ENST00000543245 2227 ntTSL 2 BASIC16.71■□□□□ 0.27
UBQLN4Q9NRR5 ZNF655-203ENST00000357864 1370 ntTSL 2 BASIC16.71■□□□□ 0.27
UBQLN4Q9NRR5 AC005865.2-201ENST00000505276 2303 ntTSL 2 BASIC16.71■□□□□ 0.27
UBQLN4Q9NRR5 FAM69B-201ENST00000371691 2410 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
UBQLN4Q9NRR5 SP7-203ENST00000537210 1472 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
UBQLN4Q9NRR5 PDIA2-202ENST00000404312 1575 ntAPPRIS ALT2 TSL 5 BASIC16.71■□□□□ 0.27
UBQLN4Q9NRR5 SPTBN4-202ENST00000352632 8676 ntAPPRIS P2 TSL 5 BASIC16.71■□□□□ 0.27
UBQLN4Q9NRR5 GCH1-207ENST00000622544 2923 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
UBQLN4Q9NRR5 DDX51-202ENST00000397333 4718 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.26
UBQLN4Q9NRR5 DBN1-201ENST00000292385 3072 ntAPPRIS P4 TSL 1 (best) BASIC16.71■□□□□ 0.26
UBQLN4Q9NRR5 CRKL-201ENST00000354336 5325 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.26
UBQLN4Q9NRR5 FBXL7-202ENST00000504595 4562 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
UBQLN4Q9NRR5 UBE2I-207ENST00000406620 1842 ntAPPRIS P1 TSL 2 BASIC16.7■□□□□ 0.26
UBQLN4Q9NRR5 NPFFR2-201ENST00000308744 1922 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
UBQLN4Q9NRR5 ADCK5-201ENST00000308860 1949 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
UBQLN4Q9NRR5 PMAIP1-202ENST00000316660 1948 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
UBQLN4Q9NRR5 GPATCH3-201ENST00000361720 2123 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
UBQLN4Q9NRR5 ERI1-203ENST00000519292 2107 ntAPPRIS P1 TSL 2 BASIC16.7■□□□□ 0.26
UBQLN4Q9NRR5 SLC39A3-202ENST00000455372 2940 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
UBQLN4Q9NRR5 AKAP17A-201ENST00000313871 3204 ntAPPRIS P2 TSL 1 (best) BASIC16.7■□□□□ 0.26
UBQLN4Q9NRR5 KIAA1522-202ENST00000373480 5294 ntAPPRIS ALT2 TSL 1 (best) BASIC16.7■□□□□ 0.26
UBQLN4Q9NRR5 KIAA1522-203ENST00000373481 5293 ntAPPRIS ALT2 TSL 2 BASIC16.7■□□□□ 0.26
UBQLN4Q9NRR5 CNTNAP3-204ENST00000377656 4986 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
UBQLN4Q9NRR5 EIF2B5-201ENST00000273783 2655 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
UBQLN4Q9NRR5 SCYL1-203ENST00000420247 2583 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
UBQLN4Q9NRR5 PLPPR2-208ENST00000591608 2552 ntAPPRIS ALT2 TSL 2 BASIC16.7■□□□□ 0.26
UBQLN4Q9NRR5 SHISA3-201ENST00000319234 1971 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
UBQLN4Q9NRR5 GATA2-203ENST00000487848 1878 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
UBQLN4Q9NRR5 RNF113B-201ENST00000267291 1376 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
UBQLN4Q9NRR5 FAM50A-202ENST00000393600 1352 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
UBQLN4Q9NRR5 TMEM190-201ENST00000291934 593 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
UBQLN4Q9NRR5 HOPX-201ENST00000317745 1129 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
UBQLN4Q9NRR5 SMYD3-204ENST00000403792 1209 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
UBQLN4Q9NRR5 FAM210CP-201ENST00000445714 574 ntBASIC16.7■□□□□ 0.26
UBQLN4Q9NRR5 AC112907.2-201ENST00000448639 330 ntBASIC16.7■□□□□ 0.26
UBQLN4Q9NRR5 AP005717.1-202ENST00000523563 419 ntTSL 3 BASIC16.7■□□□□ 0.26
UBQLN4Q9NRR5 GRP-204ENST00000529320 824 ntAPPRIS ALT2 TSL 1 (best) BASIC16.7■□□□□ 0.26
UBQLN4Q9NRR5 RPARP-AS1-206ENST00000596366 631 ntTSL 3 BASIC16.7■□□□□ 0.26
UBQLN4Q9NRR5 CLN3-259ENST00000637551 1083 ntTSL 5 BASIC16.7■□□□□ 0.26
UBQLN4Q9NRR5 AC064853.5-201ENST00000641976 258 ntAPPRIS P1 BASIC16.7■□□□□ 0.26
UBQLN4Q9NRR5 FST-201ENST00000256759 2519 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
UBQLN4Q9NRR5 ZNF274-212ENST00000617501 2538 ntAPPRIS P4 TSL 1 (best) BASIC16.7■□□□□ 0.26
UBQLN4Q9NRR5 SLC12A5-210ENST00000616202 2445 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
UBQLN4Q9NRR5 NUMBL-207ENST00000598779 2249 ntAPPRIS ALT2 TSL 1 (best) BASIC16.7■□□□□ 0.26
UBQLN4Q9NRR5 BMS1P4-202ENST00000584747 1716 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
UBQLN4Q9NRR5 TDRKH-207ENST00000458431 2768 ntAPPRIS P2 TSL 1 (best) BASIC16.7■□□□□ 0.26
UBQLN4Q9NRR5 MYO19-225ENST00000621344 1640 ntTSL 2 BASIC16.7■□□□□ 0.26
UBQLN4Q9NRR5 ENTPD6-209ENST00000433259 2654 ntTSL 5 BASIC16.7■□□□□ 0.26
UBQLN4Q9NRR5 ZNF667-AS1-201ENST00000585445 1521 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
UBQLN4Q9NRR5 PCCA-203ENST00000376286 2481 ntTSL 2 BASIC16.7■□□□□ 0.26
UBQLN4Q9NRR5 NTMT1-211ENST00000617943 1346 ntTSL 3 BASIC16.7■□□□□ 0.26
UBQLN4Q9NRR5 LMTK2-201ENST00000297293 8946 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
UBQLN4Q9NRR5 KIAA1549-201ENST00000422774 6283 ntAPPRIS ALT2 TSL 1 (best) BASIC16.69■□□□□ 0.26
UBQLN4Q9NRR5 MON1B-202ENST00000439557 1759 ntTSL 2 BASIC16.69■□□□□ 0.26
UBQLN4Q9NRR5 ZIC4-212ENST00000484399 1774 ntAPPRIS P1 TSL 2 BASIC16.69■□□□□ 0.26
UBQLN4Q9NRR5 KRT6A-201ENST00000330722 2310 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
UBQLN4Q9NRR5 NOC2LP1-202ENST00000452600 2235 ntBASIC16.69■□□□□ 0.26
UBQLN4Q9NRR5 BAIAP2L2-202ENST00000381669 2146 ntAPPRIS P2 TSL 1 (best) BASIC16.69■□□□□ 0.26
UBQLN4Q9NRR5 AC007613.1-201ENST00000572811 2597 ntBASIC16.69■□□□□ 0.26
UBQLN4Q9NRR5 DCAF4-201ENST00000353777 1940 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
UBQLN4Q9NRR5 PCCA-202ENST00000376285 2494 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
UBQLN4Q9NRR5 CHRNB4-202ENST00000412074 1355 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
UBQLN4Q9NRR5 SCT-201ENST00000176195 366 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
UBQLN4Q9NRR5 POU4F3-201ENST00000230732 1182 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
UBQLN4Q9NRR5 PARK7-201ENST00000338639 949 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
UBQLN4Q9NRR5 HBZP1-201ENST00000354915 429 ntBASIC16.69■□□□□ 0.26
UBQLN4Q9NRR5 RASGRP2-205ENST00000377489 583 ntTSL 3 BASIC16.69■□□□□ 0.26
UBQLN4Q9NRR5 SUV39H2-204ENST00000378325 1292 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
UBQLN4Q9NRR5 GGT1-205ENST00000403838 1033 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
UBQLN4Q9NRR5 DGUOK-AS1-203ENST00000453103 601 ntTSL 3 BASIC16.69■□□□□ 0.26
UBQLN4Q9NRR5 CD24-206ENST00000620405 586 ntAPPRIS ALT2 TSL 2 BASIC16.69■□□□□ 0.26
UBQLN4Q9NRR5 ADCY3-201ENST00000260600 5050 ntAPPRIS P3 TSL 1 (best) BASIC16.69■□□□□ 0.26
UBQLN4Q9NRR5 MBD1-206ENST00000382948 2434 ntAPPRIS P3 TSL 2 BASIC16.69■□□□□ 0.26
UBQLN4Q9NRR5 SMC4-201ENST00000344722 5356 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
UBQLN4Q9NRR5 ATP1B1-201ENST00000367815 1883 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
UBQLN4Q9NRR5 EXTL3-201ENST00000220562 6483 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
UBQLN4Q9NRR5 SNAPC3-207ENST00000610884 2453 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
UBQLN4Q9NRR5 TRIM36-202ENST00000379617 1322 ntTSL 2 BASIC16.69■□□□□ 0.26
UBQLN4Q9NRR5 CYB561-205ENST00000542042 1302 ntTSL 2 BASIC16.69■□□□□ 0.26
UBQLN4Q9NRR5 TMSB4Y-201ENST00000284856 1669 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
UBQLN4Q9NRR5 SMARCD3-202ENST00000356800 1669 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
UBQLN4Q9NRR5 CDC42EP3-201ENST00000295324 5700 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
UBQLN4Q9NRR5 PARP16-202ENST00000444347 2352 ntTSL 2 BASIC16.69■□□□□ 0.26
UBQLN4Q9NRR5 RSPO4-201ENST00000217260 2707 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
UBQLN4Q9NRR5 HAPLN4-201ENST00000291481 3449 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
UBQLN4Q9NRR5 ATP2A2-201ENST00000308664 4453 ntAPPRIS ALT1 TSL 1 (best) BASIC16.68■□□□□ 0.26
UBQLN4Q9NRR5 NIPAL2-202ENST00000430223 4496 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
UBQLN4Q9NRR5 PLCH2-203ENST00000378486 4837 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
UBQLN4Q9NRR5 PLCH2-204ENST00000419816 4837 ntAPPRIS P1 TSL 5 BASIC16.68■□□□□ 0.26
UBQLN4Q9NRR5 HS2ST1-202ENST00000370551 1585 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
UBQLN4Q9NRR5 SP100-208ENST00000427101 1922 ntTSL 2 BASIC16.68■□□□□ 0.26
UBQLN4Q9NRR5 JKAMP-201ENST00000261247 1726 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
UBQLN4Q9NRR5 AGPAT2-201ENST00000371694 1391 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
UBQLN4Q9NRR5 THUMPD2-204ENST00000505747 1970 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
UBQLN4Q9NRR5 SSC4D-201ENST00000275560 2801 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Retrieved 100 of 98,524 protein–RNA pairs in 55.1 ms