Protein–RNA interactions for Protein: Q9HBL6

LRTM1, Leucine-rich repeat and transmembrane domain-containing protein 1, humanhuman

Predictions only

Length 345 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRTM1Q9HBL6 C21orf59-201ENST00000290155 1692 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
LRTM1Q9HBL6 PKP3-201ENST00000331563 2809 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
LRTM1Q9HBL6 RABEP2-202ENST00000358201 2821 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
LRTM1Q9HBL6 OR13J1-201ENST00000377981 1339 ntAPPRIS P1 BASIC17.48■□□□□ 0.39
LRTM1Q9HBL6 PPP4C-202ENST00000561610 1333 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
LRTM1Q9HBL6 SNHG10-201ENST00000500370 1531 ntTSL 2 BASIC17.48■□□□□ 0.39
LRTM1Q9HBL6 BDKRB1-202ENST00000553356 1526 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
LRTM1Q9HBL6 CDC25B-202ENST00000340833 1978 ntAPPRIS ALT2 TSL 1 (best) BASIC17.48■□□□□ 0.39
LRTM1Q9HBL6 HDAC10-202ENST00000349505 1950 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
LRTM1Q9HBL6 RIMS4-201ENST00000372851 5203 ntAPPRIS P3 TSL 1 (best) BASIC17.48■□□□□ 0.39
LRTM1Q9HBL6 UBAP1-203ENST00000379186 2524 ntTSL 5 BASIC17.48■□□□□ 0.39
LRTM1Q9HBL6 IL18BP-207ENST00000404792 2172 ntAPPRIS P2 TSL 1 (best) BASIC17.48■□□□□ 0.39
LRTM1Q9HBL6 TSPY14P-201ENST00000303979 915 ntBASIC17.48■□□□□ 0.39
LRTM1Q9HBL6 GRAMD4P1-201ENST00000435181 1110 ntBASIC17.48■□□□□ 0.39
LRTM1Q9HBL6 AL355075.4-201ENST00000554988 638 ntBASIC17.48■□□□□ 0.39
LRTM1Q9HBL6 AC122129.2-201ENST00000583598 466 ntTSL 5 BASIC17.48■□□□□ 0.39
LRTM1Q9HBL6 FAM98C-205ENST00000588262 826 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
LRTM1Q9HBL6 C16orf74-202ENST00000602583 1237 ntAPPRIS ALT2 TSL 1 (best) BASIC17.48■□□□□ 0.39
LRTM1Q9HBL6 SNX21-213ENST00000614929 587 ntTSL 5 BASIC17.48■□□□□ 0.39
LRTM1Q9HBL6 MLF2-202ENST00000435120 1379 ntAPPRIS P1 TSL 2 BASIC17.48■□□□□ 0.39
LRTM1Q9HBL6 AHRR-209ENST00000512529 1912 ntTSL 5 BASIC17.48■□□□□ 0.39
LRTM1Q9HBL6 PHRF1-205ENST00000533464 5218 ntAPPRIS ALT2 TSL 1 (best) BASIC17.48■□□□□ 0.39
LRTM1Q9HBL6 CLPB-212ENST00000543042 2133 ntTSL 2 BASIC17.48■□□□□ 0.39
LRTM1Q9HBL6 PLCB3-204ENST00000540288 4469 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
LRTM1Q9HBL6 AL355987.1-201ENST00000435202 2420 ntAPPRIS P1 TSL 2 BASIC17.48■□□□□ 0.39
LRTM1Q9HBL6 SEMA3B-202ENST00000418576 1765 ntTSL 2 BASIC17.48■□□□□ 0.39
LRTM1Q9HBL6 WDR59-202ENST00000536050 1752 ntTSL 2 BASIC17.48■□□□□ 0.39
LRTM1Q9HBL6 MID1IP1-202ENST00000378474 1889 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
LRTM1Q9HBL6 C16orf59-204ENST00000563531 1864 ntAPPRIS ALT2 TSL 5 BASIC17.48■□□□□ 0.39
LRTM1Q9HBL6 AL024508.2-201ENST00000607749 1894 ntBASIC17.48■□□□□ 0.39
LRTM1Q9HBL6 FMR1-205ENST00000370475 4308 ntAPPRIS P3 TSL 1 (best) BASIC17.48■□□□□ 0.39
LRTM1Q9HBL6 ACSS2-201ENST00000253382 2925 ntTSL 2 BASIC17.48■□□□□ 0.39
LRTM1Q9HBL6 TPST2-201ENST00000338754 5697 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
LRTM1Q9HBL6 MRAS-204ENST00000464896 1534 ntTSL 2 BASIC17.47■□□□□ 0.39
LRTM1Q9HBL6 ZNF274-202ENST00000345813 2678 ntAPPRIS ALT2 TSL 1 (best) BASIC17.47■□□□□ 0.39
LRTM1Q9HBL6 MFSD11-220ENST00000621483 2850 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
LRTM1Q9HBL6 GPANK1-202ENST00000375895 1800 ntAPPRIS P1 TSL 5 BASIC17.47■□□□□ 0.39
LRTM1Q9HBL6 JPH2-201ENST00000342272 1923 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
LRTM1Q9HBL6 ATP6AP2-214ENST00000636287 1904 ntAPPRIS ALT2 TSL 5 BASIC17.47■□□□□ 0.39
LRTM1Q9HBL6 SCARB2-223ENST00000640640 4608 ntTSL 5 BASIC17.47■□□□□ 0.39
LRTM1Q9HBL6 NEU1-206ENST00000375631 2045 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
LRTM1Q9HBL6 STAMBPL1-203ENST00000371926 2532 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
LRTM1Q9HBL6 C9orf66-201ENST00000382387 2918 ntAPPRIS P1 BASIC17.47■□□□□ 0.39
LRTM1Q9HBL6 MPG-201ENST00000219431 1193 ntAPPRIS P4 TSL 3 BASIC17.47■□□□□ 0.39
LRTM1Q9HBL6 NME1-202ENST00000336097 986 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
LRTM1Q9HBL6 CD1E-211ENST00000368166 1271 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
LRTM1Q9HBL6 CALML5-201ENST00000380332 859 ntAPPRIS P1 BASIC17.47■□□□□ 0.39
LRTM1Q9HBL6 NME1-203ENST00000393196 940 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
LRTM1Q9HBL6 KIRREL3-AS3-201ENST00000404882 831 ntBASIC17.47■□□□□ 0.39
LRTM1Q9HBL6 EGLN1P1-201ENST00000531623 762 ntBASIC17.47■□□□□ 0.39
LRTM1Q9HBL6 C14orf144-201ENST00000553757 537 ntTSL 4 BASIC17.47■□□□□ 0.39
LRTM1Q9HBL6 AC010240.3-201ENST00000607688 395 ntBASIC17.47■□□□□ 0.39
LRTM1Q9HBL6 GLDC-219ENST00000640208 420 ntTSL 2 BASIC17.47■□□□□ 0.39
LRTM1Q9HBL6 HPCA-201ENST00000373467 1468 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
LRTM1Q9HBL6 ACD-215ENST00000620761 1483 ntAPPRIS ALT2 TSL 1 (best) BASIC17.47■□□□□ 0.39
LRTM1Q9HBL6 DLK2-203ENST00000372488 1590 ntAPPRIS P3 TSL 1 (best) BASIC17.47■□□□□ 0.39
LRTM1Q9HBL6 CDC73-201ENST00000367435 4969 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
LRTM1Q9HBL6 EDA-204ENST00000374553 5272 ntAPPRIS ALT1 TSL 1 (best) BASIC17.47■□□□□ 0.39
LRTM1Q9HBL6 BAZ1B-201ENST00000339594 6102 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
LRTM1Q9HBL6 C6orf106-202ENST00000374023 4418 ntAPPRIS P4 TSL 1 (best) BASIC17.47■□□□□ 0.39
LRTM1Q9HBL6 B4GALT2-202ENST00000356836 2629 ntAPPRIS P1 TSL 2 BASIC17.47■□□□□ 0.39
LRTM1Q9HBL6 SATB2-203ENST00000428695 2135 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
LRTM1Q9HBL6 ADCK5-201ENST00000308860 1949 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
LRTM1Q9HBL6 MFSD2A-203ENST00000420632 1914 ntTSL 2 BASIC17.47■□□□□ 0.39
LRTM1Q9HBL6 TRPM4-213ENST00000599628 1829 ntTSL 2 BASIC17.47■□□□□ 0.39
LRTM1Q9HBL6 ACBD5-201ENST00000375888 1747 ntAPPRIS ALT2 TSL 5 BASIC17.47■□□□□ 0.39
LRTM1Q9HBL6 COLCA2-201ENST00000398035 1414 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
LRTM1Q9HBL6 SNAP23-201ENST00000249647 2687 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
LRTM1Q9HBL6 ZNF200-202ENST00000396870 2373 ntAPPRIS ALT2 TSL 1 (best) BASIC17.46■□□□□ 0.39
LRTM1Q9HBL6 NOMO3-201ENST00000263012 3911 ntAPPRIS ALT2 TSL 1 (best) BASIC17.46■□□□□ 0.39
LRTM1Q9HBL6 WIPI2-201ENST00000288828 4476 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
LRTM1Q9HBL6 BPGM-203ENST00000418040 1870 ntAPPRIS P1 TSL 5 BASIC17.46■□□□□ 0.39
LRTM1Q9HBL6 ZNF286A-204ENST00000464847 5616 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
LRTM1Q9HBL6 CXXC5-211ENST00000511048 1892 ntAPPRIS P1 TSL 2 BASIC17.46■□□□□ 0.39
LRTM1Q9HBL6 DAPK2-205ENST00000558069 1473 ntTSL 5 BASIC17.46■□□□□ 0.39
LRTM1Q9HBL6 T-201ENST00000296946 2436 ntAPPRIS P1 TSL 5 BASIC17.46■□□□□ 0.39
LRTM1Q9HBL6 HMBS-221ENST00000544387 1351 ntTSL 2 BASIC17.46■□□□□ 0.39
LRTM1Q9HBL6 CTSA-204ENST00000372484 2149 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
LRTM1Q9HBL6 CT47A4-201ENST00000415858 1298 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
LRTM1Q9HBL6 CT47A9-201ENST00000417256 1298 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
LRTM1Q9HBL6 CT47A6-201ENST00000419194 1298 ntAPPRIS P1 TSL 5 BASIC17.46■□□□□ 0.39
LRTM1Q9HBL6 CT47A10-201ENST00000430448 1298 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
LRTM1Q9HBL6 CT47A5-201ENST00000439466 1298 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
LRTM1Q9HBL6 CT47A3-201ENST00000441330 1298 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
LRTM1Q9HBL6 CT47A8-201ENST00000457977 1298 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
LRTM1Q9HBL6 CT47A2-201ENST00000458218 1298 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
LRTM1Q9HBL6 IKBKB-210ENST00000518983 447 ntTSL 2 BASIC17.46■□□□□ 0.39
LRTM1Q9HBL6 UBALD1-209ENST00000591897 1275 ntTSL 2 BASIC17.46■□□□□ 0.39
LRTM1Q9HBL6 ANKRD36-207ENST00000639293 1168 ntAPPRIS ALT2 TSL 5 BASIC17.46■□□□□ 0.39
LRTM1Q9HBL6 NDRG2-208ENST00000397851 2022 ntAPPRIS P4 TSL 2 BASIC17.46■□□□□ 0.39
LRTM1Q9HBL6 KIRREL2-205ENST00000592409 2563 ntAPPRIS ALT2 TSL 1 (best) BASIC17.46■□□□□ 0.39
LRTM1Q9HBL6 CCDC137-201ENST00000329214 2468 ntAPPRIS P2 TSL 1 (best) BASIC17.46■□□□□ 0.39
LRTM1Q9HBL6 CD40-202ENST00000372285 1729 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
LRTM1Q9HBL6 MTHFD2L-203ENST00000395759 2354 ntAPPRIS P2 TSL 5 BASIC17.46■□□□□ 0.39
LRTM1Q9HBL6 JMJD6-202ENST00000397625 1603 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
LRTM1Q9HBL6 AC012317.2-201ENST00000623305 2251 ntBASIC17.46■□□□□ 0.39
LRTM1Q9HBL6 MAFK-201ENST00000343242 3368 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
LRTM1Q9HBL6 GSTZ1-204ENST00000393734 1424 ntTSL 5 BASIC17.46■□□□□ 0.39
LRTM1Q9HBL6 CARNS1-202ENST00000445895 3971 ntAPPRIS P1 TSL 5 BASIC17.46■□□□□ 0.38
LRTM1Q9HBL6 TIMM8A-201ENST00000372902 1664 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Retrieved 100 of 98,524 protein–RNA pairs in 54.5 ms