Protein–RNA interactions for Protein: Q9H270

VPS11, Vacuolar protein sorting-associated protein 11 homolog, humanhuman

Predictions only

Length 941 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS11Q9H270 AC096733.2-201ENST00000609937 1394 ntBASIC18.29■□□□□ 0.52
VPS11Q9H270 C8orf34-206ENST00000518698 2223 ntAPPRIS P2 TSL 2 BASIC18.29■□□□□ 0.52
VPS11Q9H270 RARA-206ENST00000425707 3041 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
VPS11Q9H270 ZSWIM8-223ENST00000605216 6004 ntAPPRIS P2 TSL 1 (best) BASIC18.28■□□□□ 0.52
VPS11Q9H270 VEGFA-206ENST00000372077 2834 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
VPS11Q9H270 SUFU-201ENST00000369899 1839 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
VPS11Q9H270 RNPS1-205ENST00000561718 1806 ntTSL 3 BASIC18.28■□□□□ 0.52
VPS11Q9H270 SRI-203ENST00000419179 1307 ntTSL 2 BASIC18.28■□□□□ 0.52
VPS11Q9H270 CBFB-202ENST00000412916 2971 ntAPPRIS ALT1 TSL 1 (best) BASIC18.28■□□□□ 0.52
VPS11Q9H270 ELMOD1-202ENST00000443271 1990 ntAPPRIS P1 TSL 2 BASIC18.28■□□□□ 0.52
VPS11Q9H270 RTN4-207ENST00000402434 1456 ntTSL 5 BASIC18.28■□□□□ 0.52
VPS11Q9H270 TRAM1-201ENST00000262213 2785 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
VPS11Q9H270 KCNQ5-212ENST00000628967 3527 ntTSL 2 BASIC18.28■□□□□ 0.52
VPS11Q9H270 BSX-201ENST00000343035 830 ntAPPRIS P1 TSL 5 BASIC18.28■□□□□ 0.52
VPS11Q9H270 CLIC6-201ENST00000349499 3806 ntAPPRIS P3 TSL 1 (best) BASIC18.28■□□□□ 0.52
VPS11Q9H270 LINC01743-201ENST00000366308 964 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
VPS11Q9H270 ZCCHC24-201ENST00000372333 906 ntTSL 2 BASIC18.28■□□□□ 0.52
VPS11Q9H270 SEC61A2-206ENST00000379051 707 ntTSL 3 BASIC18.28■□□□□ 0.52
VPS11Q9H270 SMIM19-201ENST00000414154 793 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
VPS11Q9H270 MAGI2-AS3-211ENST00000451809 707 ntTSL 3 BASIC18.28■□□□□ 0.52
VPS11Q9H270 OPRK1-205ENST00000612786 5196 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
VPS11Q9H270 SLC26A11-212ENST00000572725 1862 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
VPS11Q9H270 AL138828.1-202ENST00000576956 1881 ntTSL 5 BASIC18.28■□□□□ 0.52
VPS11Q9H270 GPR149-201ENST00000389740 2323 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
VPS11Q9H270 CDCP1-201ENST00000296129 6006 ntAPPRIS P3 TSL 1 (best) BASIC18.28■□□□□ 0.52
VPS11Q9H270 PRMT1-201ENST00000391851 1393 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
VPS11Q9H270 FOXO3-202ENST00000406360 7341 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
VPS11Q9H270 IRF5-202ENST00000357234 1680 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
VPS11Q9H270 EPS8L2-205ENST00000526198 2289 ntAPPRIS ALT2 TSL 1 (best) BASIC18.28■□□□□ 0.52
VPS11Q9H270 ISM1-201ENST00000262487 2593 ntAPPRIS P1 TSL 5 BASIC18.28■□□□□ 0.52
VPS11Q9H270 AC011474.1-201ENST00000582581 2582 ntTSL 2 BASIC18.28■□□□□ 0.52
VPS11Q9H270 KCNQ2-207ENST00000370224 3004 ntTSL 5 BASIC18.28■□□□□ 0.52
VPS11Q9H270 EWSR1-206ENST00000397938 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC18.27■□□□□ 0.52
VPS11Q9H270 PHGDH-209ENST00000641074 1780 ntBASIC18.27■□□□□ 0.52
VPS11Q9H270 TMEM191C-214ENST00000621561 1337 ntAPPRIS P2 TSL 5 BASIC18.27■□□□□ 0.52
VPS11Q9H270 DMPK-201ENST00000291270 2787 ntAPPRIS P3 TSL 5 BASIC18.27■□□□□ 0.52
VPS11Q9H270 CDH23-205ENST00000398809 4533 ntTSL 5 BASIC18.27■□□□□ 0.52
VPS11Q9H270 RRAGD-202ENST00000369415 4900 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
VPS11Q9H270 COQ8A-201ENST00000366777 2872 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
VPS11Q9H270 ANXA6-201ENST00000354546 2593 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
VPS11Q9H270 CYP2D6-201ENST00000359033 1433 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
VPS11Q9H270 BOLA1-203ENST00000369153 1096 ntAPPRIS P1 TSL 3 BASIC18.27■□□□□ 0.52
VPS11Q9H270 VSIG2-202ENST00000403470 1191 ntTSL 2 BASIC18.27■□□□□ 0.52
VPS11Q9H270 LINC01122-201ENST00000422723 675 ntTSL 3 BASIC18.27■□□□□ 0.52
VPS11Q9H270 FDX2-206ENST00000492239 773 ntTSL 2 BASIC18.27■□□□□ 0.52
VPS11Q9H270 USP46-AS1-201ENST00000503051 1048 ntTSL 3 BASIC18.27■□□□□ 0.52
VPS11Q9H270 BNIP3L-206ENST00000523515 915 ntTSL 2 BASIC18.27■□□□□ 0.52
VPS11Q9H270 AC091564.5-201ENST00000526456 820 ntTSL 4 BASIC18.27■□□□□ 0.52
VPS11Q9H270 FOSL1-204ENST00000532401 1132 ntTSL 2 BASIC18.27■□□□□ 0.52
VPS11Q9H270 AC103855.2-201ENST00000533315 573 ntTSL 4 BASIC18.27■□□□□ 0.52
VPS11Q9H270 GRAMD1B-209ENST00000533341 707 ntTSL 2 BASIC18.27■□□□□ 0.52
VPS11Q9H270 NFATC1-206ENST00000542384 2142 ntAPPRIS ALT2 TSL 1 (best) BASIC18.27■□□□□ 0.52
VPS11Q9H270 NDUFV2-AS1-201ENST00000582375 770 ntTSL 2 BASIC18.27■□□□□ 0.52
VPS11Q9H270 ADAM23-201ENST00000264377 6330 ntAPPRIS P2 TSL 1 (best) BASIC18.27■□□□□ 0.52
VPS11Q9H270 PSTPIP1-201ENST00000379595 1840 ntAPPRIS ALT1 TSL 5 BASIC18.27■□□□□ 0.52
VPS11Q9H270 ORAI2-202ENST00000403646 2528 ntAPPRIS P1 TSL 2 BASIC18.27■□□□□ 0.52
VPS11Q9H270 XKR4-203ENST00000622811 3907 ntAPPRIS P1 TSL 5 BASIC18.27■□□□□ 0.52
VPS11Q9H270 ZBTB4-202ENST00000380599 5866 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
VPS11Q9H270 ZBTB45-201ENST00000354590 2352 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
VPS11Q9H270 COL4A2-201ENST00000360467 6281 ntAPPRIS P1 TSL 5 BASIC18.27■□□□□ 0.52
VPS11Q9H270 PP12613-201ENST00000424958 2230 ntBASIC18.27■□□□□ 0.52
VPS11Q9H270 ACADVL-205ENST00000543245 2227 ntTSL 2 BASIC18.27■□□□□ 0.52
VPS11Q9H270 EGFL7-204ENST00000406555 1529 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.51
VPS11Q9H270 TUFM-201ENST00000313511 2071 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.51
VPS11Q9H270 PTGES-201ENST00000340607 1774 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.51
VPS11Q9H270 MMEL1-201ENST00000378412 2849 ntAPPRIS P1 TSL 2 BASIC18.27■□□□□ 0.51
VPS11Q9H270 AC116565.2-201ENST00000637674 1854 ntTSL 2 BASIC18.26■□□□□ 0.51
VPS11Q9H270 TOX2-205ENST00000423191 1709 ntTSL 2 BASIC18.26■□□□□ 0.51
VPS11Q9H270 TXNL1-211ENST00000590954 1339 ntAPPRIS P1 TSL 2 BASIC18.26■□□□□ 0.51
VPS11Q9H270 TEX13A-202ENST00000609007 1349 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
VPS11Q9H270 ZCCHC23-201ENST00000500526 1951 ntTSL 2 BASIC18.26■□□□□ 0.51
VPS11Q9H270 PMS1-206ENST00000418224 3018 ntTSL 5 BASIC18.26■□□□□ 0.51
VPS11Q9H270 LRCH1-201ENST00000311191 4710 ntAPPRIS ALT2 TSL 1 (best) BASIC18.26■□□□□ 0.51
VPS11Q9H270 GABRB3-202ENST00000311550 5781 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
VPS11Q9H270 FAM69C-201ENST00000343998 3671 ntAPPRIS P1 TSL 5 BASIC18.26■□□□□ 0.51
VPS11Q9H270 MRM2-203ENST00000440306 1570 ntAPPRIS P1 TSL 5 BASIC18.26■□□□□ 0.51
VPS11Q9H270 SEPT2-208ENST00000407971 3267 ntTSL 5 BASIC18.26■□□□□ 0.51
VPS11Q9H270 AL135905.2-201ENST00000584934 1404 ntBASIC18.26■□□□□ 0.51
VPS11Q9H270 FRMD4A-203ENST00000357447 6821 ntAPPRIS P2 TSL 1 (best) BASIC18.26■□□□□ 0.51
VPS11Q9H270 PTPN21-208ENST00000556564 6166 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
VPS11Q9H270 C1QBP-201ENST00000225698 1169 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
VPS11Q9H270 MCAT-202ENST00000327555 1134 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
VPS11Q9H270 DUSP23-203ENST00000368109 729 ntAPPRIS P1 TSL 2 BASIC18.26■□□□□ 0.51
VPS11Q9H270 AVP-201ENST00000380293 619 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
VPS11Q9H270 ICAM4-202ENST00000380770 1211 ntAPPRIS P3 TSL 1 (best) BASIC18.26■□□□□ 0.51
VPS11Q9H270 CTNNBIP1-204ENST00000400904 1206 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
VPS11Q9H270 FAM201B-201ENST00000458407 597 ntBASIC18.26■□□□□ 0.51
VPS11Q9H270 SFXN1-203ENST00000502393 637 ntTSL 2 BASIC18.26■□□□□ 0.51
VPS11Q9H270 AC097488.1-201ENST00000507834 756 ntBASIC18.26■□□□□ 0.51
VPS11Q9H270 FAM213B-215ENST00000537325 1096 ntAPPRIS ALT2 TSL 2 BASIC18.26■□□□□ 0.51
VPS11Q9H270 ANAPC11-207ENST00000572639 578 ntAPPRIS P1 TSL 3 BASIC18.26■□□□□ 0.51
VPS11Q9H270 AC097662.2-201ENST00000641359 267 ntAPPRIS P1 BASIC18.26■□□□□ 0.51
VPS11Q9H270 TXNRD2-218ENST00000542719 2024 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
VPS11Q9H270 PIP5K1A-207ENST00000441902 2297 ntTSL 2 BASIC18.26■□□□□ 0.51
VPS11Q9H270 PARD3-201ENST00000340077 3518 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
VPS11Q9H270 TAPBP-233ENST00000426633 1888 ntAPPRIS P4 TSL 1 (best) BASIC18.26■□□□□ 0.51
VPS11Q9H270 CLPB-212ENST00000543042 2133 ntTSL 2 BASIC18.26■□□□□ 0.51
VPS11Q9H270 SARAF-214ENST00000545648 1976 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
VPS11Q9H270 C14orf180-201ENST00000331952 1455 ntAPPRIS ALT2 TSL 2 BASIC18.26■□□□□ 0.51
VPS11Q9H270 GPANK1-202ENST00000375895 1800 ntAPPRIS P1 TSL 5 BASIC18.26■□□□□ 0.51
Retrieved 100 of 98,524 protein–RNA pairs in 62.6 ms