Protein–RNA interactions for Protein: Q9H1A7

POLR2J3, DNA-directed RNA polymerase II subunit RPB11-b2, humanhuman

Known RBP Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
POLR2J3Q9H1A7 CAPN1-201ENST00000279247 3007 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
POLR2J3Q9H1A7 ACSS2-201ENST00000253382 2925 ntTSL 2 BASIC16.8■□□□□ 0.28
POLR2J3Q9H1A7 ELAC2-202ENST00000395962 2924 ntTSL 2 BASIC16.8■□□□□ 0.28
POLR2J3Q9H1A7 COL27A1-201ENST00000356083 7790 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
POLR2J3Q9H1A7 PHRF1-202ENST00000413872 5224 ntAPPRIS ALT2 TSL 1 (best) BASIC16.8■□□□□ 0.28
POLR2J3Q9H1A7 C16orf59-204ENST00000563531 1864 ntAPPRIS ALT2 TSL 5 BASIC16.8■□□□□ 0.28
POLR2J3Q9H1A7 NRXN1-220ENST00000611589 1857 ntTSL 5 BASIC16.8■□□□□ 0.28
POLR2J3Q9H1A7 ZNF517-201ENST00000359971 2335 ntAPPRIS P1 TSL 4 BASIC16.8■□□□□ 0.28
POLR2J3Q9H1A7 POLR1D-221ENST00000637180 2262 ntTSL 5 BASIC16.8■□□□□ 0.28
POLR2J3Q9H1A7 FCGRT-201ENST00000221466 1798 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
POLR2J3Q9H1A7 PTGES-201ENST00000340607 1774 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
POLR2J3Q9H1A7 RBP4-202ENST00000371467 1314 ntAPPRIS P1 TSL 5 BASIC16.8■□□□□ 0.28
POLR2J3Q9H1A7 DHX33-201ENST00000225296 5618 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
POLR2J3Q9H1A7 UNC93B2-201ENST00000285383 730 ntBASIC16.8■□□□□ 0.28
POLR2J3Q9H1A7 HBA1-201ENST00000320868 577 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
POLR2J3Q9H1A7 ACVR1C-203ENST00000348328 1270 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
POLR2J3Q9H1A7 DAB1-202ENST00000371230 1150 ntTSL 5 BASIC16.8■□□□□ 0.28
POLR2J3Q9H1A7 PHB2-202ENST00000440277 996 ntTSL 5 BASIC16.8■□□□□ 0.28
POLR2J3Q9H1A7 CCR12P-201ENST00000446203 998 ntBASIC16.8■□□□□ 0.28
POLR2J3Q9H1A7 AC008825.1-201ENST00000504398 452 ntTSL 3 BASIC16.8■□□□□ 0.28
POLR2J3Q9H1A7 TNFRSF1B-204ENST00000536782 557 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
POLR2J3Q9H1A7 AC100839.1-201ENST00000559589 577 ntTSL 4 BASIC16.8■□□□□ 0.28
POLR2J3Q9H1A7 AL354712.1-201ENST00000563570 477 ntTSL 3 BASIC16.8■□□□□ 0.28
POLR2J3Q9H1A7 ITGA8-201ENST00000378076 6755 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
POLR2J3Q9H1A7 RPN2-201ENST00000237530 2515 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
POLR2J3Q9H1A7 FST-202ENST00000396947 2538 ntTSL 5 BASIC16.8■□□□□ 0.28
POLR2J3Q9H1A7 STK4-201ENST00000372801 2038 ntTSL 2 BASIC16.8■□□□□ 0.28
POLR2J3Q9H1A7 AMDHD2-203ENST00000413459 2049 ntTSL 2 BASIC16.8■□□□□ 0.28
POLR2J3Q9H1A7 PTPRF-209ENST00000438120 6377 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
POLR2J3Q9H1A7 DIDO1-203ENST00000370366 2383 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
POLR2J3Q9H1A7 CXADR-201ENST00000284878 6254 ntAPPRIS P3 TSL 1 (best) BASIC16.8■□□□□ 0.28
POLR2J3Q9H1A7 OGFOD2-212ENST00000538755 1949 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
POLR2J3Q9H1A7 SLCO4A1-202ENST00000370507 2665 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
POLR2J3Q9H1A7 SNAPC3-202ENST00000380821 5680 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
POLR2J3Q9H1A7 TNIP1-221ENST00000610874 2629 ntTSL 5 BASIC16.8■□□□□ 0.28
POLR2J3Q9H1A7 TSPYL5-201ENST00000322128 4491 ntAPPRIS P1 BASIC16.8■□□□□ 0.28
POLR2J3Q9H1A7 INPP5A-203ENST00000368594 2967 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
POLR2J3Q9H1A7 TMEM45B-201ENST00000281441 2234 ntAPPRIS P1 TSL 2 BASIC16.8■□□□□ 0.28
POLR2J3Q9H1A7 AC004890.2-202ENST00000463462 1494 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
POLR2J3Q9H1A7 MRGPRF-AS1-201ENST00000538407 1490 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
POLR2J3Q9H1A7 LRP4-201ENST00000378623 8076 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
POLR2J3Q9H1A7 IRF7-202ENST00000348655 1801 ntAPPRIS ALT2 TSL 1 (best) BASIC16.8■□□□□ 0.28
POLR2J3Q9H1A7 GABRB3-202ENST00000311550 5781 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
POLR2J3Q9H1A7 TMEM110-MUSTN1-202ENST00000504329 1405 ntAPPRIS P1 TSL 5 BASIC16.79■□□□□ 0.28
POLR2J3Q9H1A7 JAM2-202ENST00000400532 1757 ntAPPRIS ALT2 TSL 1 (best) BASIC16.79■□□□□ 0.28
POLR2J3Q9H1A7 PHGDH-209ENST00000641074 1780 ntBASIC16.79■□□□□ 0.28
POLR2J3Q9H1A7 COL4A3BP-203ENST00000380494 5651 ntTSL 2 BASIC16.79■□□□□ 0.28
POLR2J3Q9H1A7 KIAA1324L-207ENST00000444627 3527 ntTSL 5 BASIC16.79■□□□□ 0.28
POLR2J3Q9H1A7 RAI1-201ENST00000353383 7662 ntAPPRIS P2 TSL 1 (best) BASIC16.79■□□□□ 0.28
POLR2J3Q9H1A7 C16orf45-201ENST00000300006 2404 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
POLR2J3Q9H1A7 C1orf159-204ENST00000379339 2429 ntAPPRIS ALT2 TSL 2 BASIC16.79■□□□□ 0.28
POLR2J3Q9H1A7 AC120049.1-201ENST00000592638 2065 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
POLR2J3Q9H1A7 OPRK1-205ENST00000612786 5196 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
POLR2J3Q9H1A7 CD151-213ENST00000528011 1369 ntAPPRIS ALT1 TSL 5 BASIC16.79■□□□□ 0.28
POLR2J3Q9H1A7 RHOB-201ENST00000272233 2372 ntAPPRIS P1 BASIC16.79■□□□□ 0.28
POLR2J3Q9H1A7 HNRNPK-202ENST00000360384 2038 ntAPPRIS ALT1 TSL 1 (best) BASIC16.79■□□□□ 0.28
POLR2J3Q9H1A7 AC005498.3-201ENST00000596587 2045 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
POLR2J3Q9H1A7 NSUN5-201ENST00000252594 1672 ntAPPRIS ALT2 TSL 1 (best) BASIC16.79■□□□□ 0.28
POLR2J3Q9H1A7 ZNF48-205ENST00000613509 3339 ntAPPRIS P1 TSL 2 BASIC16.79■□□□□ 0.28
POLR2J3Q9H1A7 PPP1R7-202ENST00000272983 1954 ntTSL 2 BASIC16.79■□□□□ 0.28
POLR2J3Q9H1A7 MIB2-201ENST00000355826 3290 ntAPPRIS ALT2 TSL 1 (best) BASIC16.79■□□□□ 0.28
POLR2J3Q9H1A7 MRPL10-203ENST00000414011 1622 ntTSL 3 BASIC16.79■□□□□ 0.28
POLR2J3Q9H1A7 ASB6-203ENST00000450050 4535 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
POLR2J3Q9H1A7 AL360181.5-201ENST00000368554 1044 ntAPPRIS P1 TSL 2 BASIC16.79■□□□□ 0.28
POLR2J3Q9H1A7 TCEAL6-202ENST00000372774 1106 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
POLR2J3Q9H1A7 IL15RA-208ENST00000397251 1046 ntAPPRIS ALT2 TSL 1 (best) BASIC16.79■□□□□ 0.28
POLR2J3Q9H1A7 AL050404.1-201ENST00000424566 802 ntTSL 2 BASIC16.79■□□□□ 0.28
POLR2J3Q9H1A7 KRT18P23-201ENST00000435622 1283 ntBASIC16.79■□□□□ 0.28
POLR2J3Q9H1A7 OOEP-AS1-201ENST00000445350 463 ntTSL 3 BASIC16.79■□□□□ 0.28
POLR2J3Q9H1A7 AL158047.1-201ENST00000445918 881 ntBASIC16.79■□□□□ 0.28
POLR2J3Q9H1A7 BCL7B-206ENST00000455335 985 ntTSL 3 BASIC16.79■□□□□ 0.28
POLR2J3Q9H1A7 DCTPP1-205ENST00000568973 878 ntTSL 2 BASIC16.79■□□□□ 0.28
POLR2J3Q9H1A7 AC027796.4-201ENST00000575741 874 ntTSL 5 BASIC16.79■□□□□ 0.28
POLR2J3Q9H1A7 NAT14-202ENST00000587400 416 ntTSL 5 BASIC16.79■□□□□ 0.28
POLR2J3Q9H1A7 CD177-202ENST00000607855 536 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
POLR2J3Q9H1A7 LRCH1-201ENST00000311191 4710 ntAPPRIS ALT2 TSL 1 (best) BASIC16.79■□□□□ 0.28
POLR2J3Q9H1A7 SNAPC3-207ENST00000610884 2453 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
POLR2J3Q9H1A7 ARNTL-201ENST00000389707 2776 ntAPPRIS P3 TSL 1 (best) BASIC16.79■□□□□ 0.28
POLR2J3Q9H1A7 IPMK-201ENST00000373935 6133 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
POLR2J3Q9H1A7 ASL-204ENST00000395331 1538 ntTSL 5 BASIC16.79■□□□□ 0.28
POLR2J3Q9H1A7 AC139713.2-201ENST00000641328 2723 ntBASIC16.79■□□□□ 0.28
POLR2J3Q9H1A7 KCNT1-202ENST00000371757 4717 ntAPPRIS P3 TSL 1 (best) BASIC16.79■□□□□ 0.28
POLR2J3Q9H1A7 BRPF1-201ENST00000383829 4736 ntAPPRIS ALT1 TSL 1 (best) BASIC16.79■□□□□ 0.28
POLR2J3Q9H1A7 RASSF7-205ENST00000454668 1450 ntAPPRIS ALT2 TSL 1 (best) BASIC16.79■□□□□ 0.28
POLR2J3Q9H1A7 CEBPG-201ENST00000284000 4109 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
POLR2J3Q9H1A7 C18orf8-208ENST00000590868 2002 ntTSL 2 BASIC16.79■□□□□ 0.28
POLR2J3Q9H1A7 TPGS2-219ENST00000593035 1727 ntAPPRIS ALT2 TSL 2 BASIC16.79■□□□□ 0.28
POLR2J3Q9H1A7 KCNA2-201ENST00000316361 2827 ntAPPRIS P1 TSL 2 BASIC16.78■□□□□ 0.28
POLR2J3Q9H1A7 KCNK3-201ENST00000302909 6162 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
POLR2J3Q9H1A7 RASSF5-205ENST00000581503 5586 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
POLR2J3Q9H1A7 SSC5D-202ENST00000587166 3017 ntAPPRIS ALT2 TSL 1 (best) BASIC16.78■□□□□ 0.28
POLR2J3Q9H1A7 CEP83-AS1-201ENST00000623122 2482 ntBASIC16.78■□□□□ 0.28
POLR2J3Q9H1A7 SLBP-201ENST00000318386 1635 ntAPPRIS ALT1 TSL 3 BASIC16.78■□□□□ 0.28
POLR2J3Q9H1A7 ETNK2-203ENST00000367202 2434 ntAPPRIS P3 TSL 1 (best) BASIC16.78■□□□□ 0.28
POLR2J3Q9H1A7 REPS2-201ENST00000303843 7771 ntAPPRIS ALT2 TSL 1 (best) BASIC16.78■□□□□ 0.28
POLR2J3Q9H1A7 VIM-201ENST00000224237 1868 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
POLR2J3Q9H1A7 PEX16-202ENST00000378750 1335 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
POLR2J3Q9H1A7 MME-217ENST00000616757 1315 ntTSL 5 BASIC16.78■□□□□ 0.28
POLR2J3Q9H1A7 CACNA1A-214ENST00000614285 8410 ntAPPRIS ALT2 TSL 5 BASIC16.78■□□□□ 0.28
POLR2J3Q9H1A7 EDNRA-206ENST00000511804 1569 ntTSL 2 BASIC16.78■□□□□ 0.28
Retrieved 100 of 98,524 protein–RNA pairs in 25.4 ms