Protein–RNA interactions for Protein: Q99743

NPAS2, Neuronal PAS domain-containing protein 2, humanhuman

Predictions only

Length 824 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPAS2Q99743 CYP2W1-201ENST00000308919 2304 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
NPAS2Q99743 NR2E1-202ENST00000368986 3212 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
NPAS2Q99743 FAM69C-201ENST00000343998 3671 ntAPPRIS P1 TSL 5 BASIC17.79■□□□□ 0.44
NPAS2Q99743 C17orf62-202ENST00000342572 1849 ntTSL 2 BASIC17.79■□□□□ 0.44
NPAS2Q99743 PSMD8-207ENST00000592035 1581 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
NPAS2Q99743 AC080080.1-201ENST00000625121 2420 ntBASIC17.79■□□□□ 0.44
NPAS2Q99743 CTSB-232ENST00000534510 1989 ntAPPRIS P1 TSL 5 BASIC17.79■□□□□ 0.44
NPAS2Q99743 CDK13-201ENST00000181839 7298 ntAPPRIS P4 TSL 1 (best) BASIC17.79■□□□□ 0.44
NPAS2Q99743 SEMA6C-210ENST00000621728 1918 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
NPAS2Q99743 POMZP3-201ENST00000275569 1259 ntTSL 2 BASIC17.79■□□□□ 0.44
NPAS2Q99743 C4orf32-201ENST00000309733 8901 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
NPAS2Q99743 TERF1P1-201ENST00000311003 1181 ntBASIC17.79■□□□□ 0.44
NPAS2Q99743 MDK-201ENST00000359803 985 ntAPPRIS P2 TSL 2 BASIC17.79■□□□□ 0.44
NPAS2Q99743 CKS1B-203ENST00000368439 912 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
NPAS2Q99743 AL050404.1-201ENST00000424566 802 ntTSL 2 BASIC17.79■□□□□ 0.44
NPAS2Q99743 KRT18P57-201ENST00000443599 1254 ntBASIC17.79■□□□□ 0.44
NPAS2Q99743 ECEL1P2-202ENST00000465689 757 ntBASIC17.79■□□□□ 0.44
NPAS2Q99743 C2orf69P3-201ENST00000565542 1120 ntBASIC17.79■□□□□ 0.44
NPAS2Q99743 RPN2-201ENST00000237530 2515 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
NPAS2Q99743 FAM131A-204ENST00000418281 1664 ntTSL 5 BASIC17.79■□□□□ 0.44
NPAS2Q99743 SEC61A2-201ENST00000298428 1893 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
NPAS2Q99743 MPP2-206ENST00000518766 1896 ntTSL 2 BASIC17.79■□□□□ 0.44
NPAS2Q99743 CYP4F8-210ENST00000612078 1889 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
NPAS2Q99743 AL645608.8-201ENST00000606034 2086 ntBASIC17.79■□□□□ 0.44
NPAS2Q99743 SNAPC3-207ENST00000610884 2453 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
NPAS2Q99743 TCIRG1-201ENST00000265686 2677 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
NPAS2Q99743 CACNA1A-227ENST00000636549 6792 ntAPPRIS ALT2 TSL 5 BASIC17.79■□□□□ 0.44
NPAS2Q99743 MYO19-225ENST00000621344 1640 ntTSL 2 BASIC17.79■□□□□ 0.44
NPAS2Q99743 AC013275.1-201ENST00000413602 2019 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
NPAS2Q99743 CEP78-204ENST00000415759 2623 ntAPPRIS ALT2 TSL 5 BASIC17.79■□□□□ 0.44
NPAS2Q99743 MOCS2-202ENST00000396954 1785 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
NPAS2Q99743 IFNAR2-204ENST00000382264 1389 ntAPPRIS ALT2 TSL 1 (best) BASIC17.79■□□□□ 0.44
NPAS2Q99743 RUNX2-202ENST00000371432 5487 ntAPPRIS ALT2 TSL 5 BASIC17.78■□□□□ 0.44
NPAS2Q99743 SCFD2-204ENST00000611795 1320 ntTSL 5 BASIC17.78■□□□□ 0.44
NPAS2Q99743 ENTPD2-202ENST00000355097 2095 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
NPAS2Q99743 NADSYN1-201ENST00000319023 2773 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
NPAS2Q99743 RBM17-201ENST00000379888 2755 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
NPAS2Q99743 TBX18-202ENST00000369663 6245 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
NPAS2Q99743 LRRC20-203ENST00000358141 2924 ntTSL 2 BASIC17.78■□□□□ 0.44
NPAS2Q99743 HES7-201ENST00000317814 678 ntAPPRIS P3 TSL 1 (best) BASIC17.78■□□□□ 0.44
NPAS2Q99743 TSPY1-201ENST00000423647 1171 ntAPPRIS ALT2 TSL 1 (best) BASIC17.78■□□□□ 0.44
NPAS2Q99743 NDUFA13-201ENST00000428459 576 ntTSL 2 BASIC17.78■□□□□ 0.44
NPAS2Q99743 HMGB3P22-201ENST00000442010 597 ntTSL 2 BASIC17.78■□□□□ 0.44
NPAS2Q99743 AC008771.1-201ENST00000508000 1151 ntTSL 2 BASIC17.78■□□□□ 0.44
NPAS2Q99743 SLC52A2-205ENST00000526752 710 ntTSL 3 BASIC17.78■□□□□ 0.44
NPAS2Q99743 AC027682.4-201ENST00000605277 798 ntTSL 5 BASIC17.78■□□□□ 0.44
NPAS2Q99743 AC092865.7-201ENST00000641832 219 ntBASIC17.78■□□□□ 0.44
NPAS2Q99743 CAMK4-210ENST00000512453 1640 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
NPAS2Q99743 CD24-204ENST00000619133 2513 ntAPPRIS P3 TSL 2 BASIC17.78■□□□□ 0.44
NPAS2Q99743 FZD1-201ENST00000287934 6963 ntAPPRIS P1 BASIC17.78■□□□□ 0.44
NPAS2Q99743 TCF3-204ENST00000453954 3585 ntTSL 5 BASIC17.78■□□□□ 0.44
NPAS2Q99743 CYP2D6-201ENST00000359033 1433 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
NPAS2Q99743 KRT8P11-201ENST00000409686 1436 ntBASIC17.78■□□□□ 0.44
NPAS2Q99743 TLE2-219ENST00000591529 2483 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
NPAS2Q99743 PRRT1-201ENST00000211413 1909 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
NPAS2Q99743 ARHGAP27-214ENST00000532891 2604 ntAPPRIS ALT2 TSL 5 BASIC17.78■□□□□ 0.44
NPAS2Q99743 GTF2IRD2-207ENST00000625377 1910 ntTSL 5 BASIC17.78■□□□□ 0.44
NPAS2Q99743 ZBTB44-201ENST00000357899 2781 ntAPPRIS ALT2 TSL 1 (best) BASIC17.78■□□□□ 0.44
NPAS2Q99743 MIEF2-204ENST00000395706 2441 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
NPAS2Q99743 JMJD4-207ENST00000620518 2432 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
NPAS2Q99743 ADO-201ENST00000373783 3627 ntAPPRIS P1 BASIC17.78■□□□□ 0.44
NPAS2Q99743 TEX261-201ENST00000272438 3441 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
NPAS2Q99743 FRRS1L-201ENST00000561981 8197 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
NPAS2Q99743 SCARF1-205ENST00000571272 2871 ntAPPRIS ALT2 TSL 1 (best) BASIC17.77■□□□□ 0.44
NPAS2Q99743 LYPD3-201ENST00000244333 1694 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
NPAS2Q99743 SLC9A1-203ENST00000374086 2183 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
NPAS2Q99743 CALM2-201ENST00000272298 1302 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
NPAS2Q99743 SUZ12-204ENST00000580398 3977 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
NPAS2Q99743 ULK3-201ENST00000440863 2623 ntAPPRIS P3 TSL 2 BASIC17.77■□□□□ 0.44
NPAS2Q99743 RGL3-202ENST00000393423 2278 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
NPAS2Q99743 C16orf45-201ENST00000300006 2404 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
NPAS2Q99743 EIPR1-201ENST00000382125 1766 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
NPAS2Q99743 CLIC6-201ENST00000349499 3806 ntAPPRIS P3 TSL 1 (best) BASIC17.77■□□□□ 0.44
NPAS2Q99743 HLA-DRB1-201ENST00000360004 1229 ntAPPRIS P1 BASIC17.77■□□□□ 0.44
NPAS2Q99743 ZCCHC24-201ENST00000372333 906 ntTSL 2 BASIC17.77■□□□□ 0.44
NPAS2Q99743 ERICH4-201ENST00000378187 946 ntAPPRIS P1 TSL 5 BASIC17.77■□□□□ 0.44
NPAS2Q99743 TMEM88B-201ENST00000378821 492 ntAPPRIS P1 TSL 2 BASIC17.77■□□□□ 0.44
NPAS2Q99743 TLCD1-202ENST00000394933 784 ntTSL 2 BASIC17.77■□□□□ 0.44
NPAS2Q99743 POLR2D-202ENST00000409698 806 ntTSL 2 BASIC17.77■□□□□ 0.44
NPAS2Q99743 LY6E-211ENST00000521699 1256 ntAPPRIS P2 TSL 5 BASIC17.77■□□□□ 0.44
NPAS2Q99743 AC010203.1-204ENST00000548782 407 ntBASIC17.77■□□□□ 0.44
NPAS2Q99743 L34079.3-201ENST00000600242 546 ntTSL 4 BASIC17.77■□□□□ 0.44
NPAS2Q99743 FAM87A-204ENST00000613235 858 ntBASIC17.77■□□□□ 0.44
NPAS2Q99743 SEPHS1-202ENST00000378614 2387 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
NPAS2Q99743 NUDT16-201ENST00000502852 1552 ntTSL 2 BASIC17.77■□□□□ 0.44
NPAS2Q99743 CCDC144A-210ENST00000456009 2306 ntTSL 5 BASIC17.77■□□□□ 0.43
NPAS2Q99743 CHRM4-201ENST00000433765 1511 ntAPPRIS P1 BASIC17.77■□□□□ 0.43
NPAS2Q99743 PSMD8-210ENST00000620216 1538 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
NPAS2Q99743 HOXB8-201ENST00000239144 1823 ntAPPRIS P2 TSL 2 BASIC17.77■□□□□ 0.43
NPAS2Q99743 RAB43-201ENST00000315150 4467 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
NPAS2Q99743 MTMR14-203ENST00000353332 2368 ntAPPRIS ALT2 TSL 1 (best) BASIC17.76■□□□□ 0.43
NPAS2Q99743 MON1B-202ENST00000439557 1759 ntTSL 2 BASIC17.76■□□□□ 0.43
NPAS2Q99743 AC007743.1-203ENST00000447423 1623 ntTSL 2 BASIC17.76■□□□□ 0.43
NPAS2Q99743 TMEM91-210ENST00000542945 1610 ntTSL 2 BASIC17.76■□□□□ 0.43
NPAS2Q99743 RNF170-205ENST00000526349 1338 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
NPAS2Q99743 HSD11B1L-221ENST00000583928 1319 ntTSL 5 BASIC17.76■□□□□ 0.43
NPAS2Q99743 KLHL31-201ENST00000370905 5743 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
NPAS2Q99743 SPATC1L-201ENST00000291672 2303 ntAPPRIS P1 TSL 2 BASIC17.76■□□□□ 0.43
NPAS2Q99743 ADCY8-201ENST00000286355 5938 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
NPAS2Q99743 SUMF2-202ENST00000342190 1876 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
Retrieved 100 of 98,524 protein–RNA pairs in 28.1 ms