Protein–RNA interactions for Protein: Q96SM3

CPXM1, Probable carboxypeptidase X1, humanhuman

Predictions only

Length 734 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CPXM1Q96SM3 ZACN-201ENST00000334586 1335 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
CPXM1Q96SM3 TRIM36-202ENST00000379617 1322 ntTSL 2 BASIC19.1■□□□□ 0.65
CPXM1Q96SM3 VPS37D-202ENST00000451519 1303 ntTSL 5 BASIC19.1■□□□□ 0.65
CPXM1Q96SM3 SORCS3-201ENST00000369699 5530 ntAPPRIS P1 TSL 5 BASIC19.1■□□□□ 0.65
CPXM1Q96SM3 SUSD4-203ENST00000344029 1056 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
CPXM1Q96SM3 MIR3936HG-202ENST00000457998 733 ntTSL 2 BASIC19.1■□□□□ 0.65
CPXM1Q96SM3 AP003733.1-201ENST00000491725 852 ntBASIC19.1■□□□□ 0.65
CPXM1Q96SM3 CLN6-204ENST00000564752 900 ntTSL 3 BASIC19.1■□□□□ 0.65
CPXM1Q96SM3 COLCA2-205ENST00000614153 1264 ntTSL 3 BASIC19.1■□□□□ 0.65
CPXM1Q96SM3 AC004263.2-201ENST00000617183 678 ntBASIC19.1■□□□□ 0.65
CPXM1Q96SM3 CLN6-214ENST00000636314 442 ntTSL 3 BASIC19.1■□□□□ 0.65
CPXM1Q96SM3 CLN3-259ENST00000637551 1083 ntTSL 5 BASIC19.1■□□□□ 0.65
CPXM1Q96SM3 MAPK9-208ENST00000455781 4336 ntAPPRIS ALT1 TSL 2 BASIC19.1■□□□□ 0.65
CPXM1Q96SM3 CCDC92-201ENST00000238156 2787 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
CPXM1Q96SM3 SLC35E4-201ENST00000343605 2714 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
CPXM1Q96SM3 ARNTL-203ENST00000403290 2746 ntAPPRIS ALT1 TSL 1 (best) BASIC19.1■□□□□ 0.65
CPXM1Q96SM3 ANXA6-201ENST00000354546 2593 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
CPXM1Q96SM3 TMEM59L-201ENST00000262817 1613 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
CPXM1Q96SM3 DUS1L-201ENST00000306796 2068 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
CPXM1Q96SM3 FERMT2-204ENST00000399304 2082 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
CPXM1Q96SM3 LINC00311-201ENST00000366314 1566 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
CPXM1Q96SM3 CRYL1-202ENST00000382812 1581 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
CPXM1Q96SM3 ALDH3A1-206ENST00000457500 1925 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
CPXM1Q96SM3 CYP4F8-210ENST00000612078 1889 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
CPXM1Q96SM3 UBE2QL1-201ENST00000399816 4317 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
CPXM1Q96SM3 MBD3-201ENST00000156825 5518 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
CPXM1Q96SM3 SLC22A4-201ENST00000200652 2201 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
CPXM1Q96SM3 KIRREL2-205ENST00000592409 2563 ntAPPRIS ALT2 TSL 1 (best) BASIC19.09■□□□□ 0.65
CPXM1Q96SM3 TFEB-206ENST00000403298 2162 ntAPPRIS P1 TSL 5 BASIC19.09■□□□□ 0.65
CPXM1Q96SM3 CD40-202ENST00000372285 1729 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
CPXM1Q96SM3 PTPRE-201ENST00000254667 5331 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
CPXM1Q96SM3 NOX4-201ENST00000263317 2388 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
CPXM1Q96SM3 PNOC-201ENST00000301908 1200 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
CPXM1Q96SM3 ATP6V0C-201ENST00000330398 1175 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
CPXM1Q96SM3 IGHGP-201ENST00000390555 1178 ntBASIC19.09■□□□□ 0.65
CPXM1Q96SM3 BECN2-201ENST00000419583 1296 ntAPPRIS P1 BASIC19.09■□□□□ 0.65
CPXM1Q96SM3 AC004540.1-201ENST00000439120 891 ntTSL 2 BASIC19.09■□□□□ 0.65
CPXM1Q96SM3 AC005091.1-201ENST00000441955 1190 ntTSL 3 BASIC19.09■□□□□ 0.65
CPXM1Q96SM3 RNF126P1-202ENST00000569893 925 ntBASIC19.09■□□□□ 0.65
CPXM1Q96SM3 MIR2117HG-201ENST00000588060 506 ntTSL 4 BASIC19.09■□□□□ 0.65
CPXM1Q96SM3 ZIC3-202ENST00000370606 1968 ntTSL 5 BASIC19.09■□□□□ 0.65
CPXM1Q96SM3 RELA-226ENST00000612991 2266 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
CPXM1Q96SM3 GTPBP2-202ENST00000307126 2933 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
CPXM1Q96SM3 SLC25A48-201ENST00000274513 1880 ntTSL 2 BASIC19.09■□□□□ 0.65
CPXM1Q96SM3 TRAF3-203ENST00000392745 2459 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
CPXM1Q96SM3 TRIM13-206ENST00000457662 1489 ntAPPRIS P3 TSL 1 (best) BASIC19.09■□□□□ 0.65
CPXM1Q96SM3 DCLK1-203ENST00000379892 2101 ntTSL 5 BASIC19.09■□□□□ 0.65
CPXM1Q96SM3 NFKB2-201ENST00000189444 3011 ntAPPRIS ALT1 TSL 1 (best) BASIC19.09■□□□□ 0.65
CPXM1Q96SM3 SPSB3-201ENST00000301717 1449 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
CPXM1Q96SM3 MRI1-201ENST00000040663 1735 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
CPXM1Q96SM3 MAPKAPK2-202ENST00000367103 2961 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
CPXM1Q96SM3 NAA60-201ENST00000360862 2522 ntTSL 2 BASIC19.08■□□□□ 0.65
CPXM1Q96SM3 ATP6AP2-214ENST00000636287 1904 ntAPPRIS ALT2 TSL 5 BASIC19.08■□□□□ 0.65
CPXM1Q96SM3 ARHGEF2-204ENST00000368315 1645 ntTSL 5 BASIC19.08■□□□□ 0.65
CPXM1Q96SM3 BTNL9-202ENST00000376841 1626 ntTSL 1 (best) BASIC19.08■□□□□ 0.65
CPXM1Q96SM3 NTMT1-203ENST00000372483 1315 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
CPXM1Q96SM3 DLK2-203ENST00000372488 1590 ntAPPRIS P3 TSL 1 (best) BASIC19.08■□□□□ 0.65
CPXM1Q96SM3 FCGRT-202ENST00000426395 1559 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
CPXM1Q96SM3 CABIN1-202ENST00000337989 2422 ntAPPRIS ALT2 TSL 1 (best) BASIC19.08■□□□□ 0.64
CPXM1Q96SM3 ECHDC1-214ENST00000474289 2443 ntAPPRIS P3 TSL 5 BASIC19.08■□□□□ 0.64
CPXM1Q96SM3 OXT-201ENST00000217386 513 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
CPXM1Q96SM3 EXOSC5-201ENST00000221233 1118 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
CPXM1Q96SM3 FAM187B-201ENST00000324675 1184 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
CPXM1Q96SM3 SPNS3-201ENST00000355530 2133 ntAPPRIS P1 TSL 2 BASIC19.08■□□□□ 0.64
CPXM1Q96SM3 UBE2J2-205ENST00000400930 1021 ntTSL 5 BASIC19.08■□□□□ 0.64
CPXM1Q96SM3 FNDC5-205ENST00000496770 837 ntTSL 1 (best) BASIC19.08■□□□□ 0.64
CPXM1Q96SM3 LIMD2-211ENST00000583211 1298 ntTSL 3 BASIC19.08■□□□□ 0.64
CPXM1Q96SM3 AL590326.2-201ENST00000625139 305 ntBASIC19.08■□□□□ 0.64
CPXM1Q96SM3 RIMKLB-202ENST00000357529 5830 ntAPPRIS P1 TSL 5 BASIC19.08■□□□□ 0.64
CPXM1Q96SM3 TMEM128-201ENST00000254742 1737 ntTSL 1 (best) BASIC19.08■□□□□ 0.64
CPXM1Q96SM3 ZNF296-201ENST00000303809 1744 ntAPPRIS P2 TSL 1 (best) BASIC19.08■□□□□ 0.64
CPXM1Q96SM3 REEP4-201ENST00000306306 1710 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
CPXM1Q96SM3 GOLGA6L10-207ENST00000610657 1705 ntAPPRIS P2 TSL 2 BASIC19.08■□□□□ 0.64
CPXM1Q96SM3 PANX1-201ENST00000227638 2769 ntAPPRIS P2 TSL 1 (best) BASIC19.08■□□□□ 0.64
CPXM1Q96SM3 OCIAD1-204ENST00000425583 1915 ntTSL 3 BASIC19.08■□□□□ 0.64
CPXM1Q96SM3 SLX1B-SULT1A4-201ENST00000344620 2424 ntTSL 2 BASIC19.08■□□□□ 0.64
CPXM1Q96SM3 SLC37A2-203ENST00000403796 2910 ntAPPRIS ALT1 TSL 2 BASIC19.07■□□□□ 0.64
CPXM1Q96SM3 EMD-202ENST00000369842 1379 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
CPXM1Q96SM3 DLGAP1-222ENST00000639615 1898 ntTSL 5 BASIC19.07■□□□□ 0.64
CPXM1Q96SM3 ASCC2-202ENST00000397771 2823 ntAPPRIS P1 TSL 5 BASIC19.07■□□□□ 0.64
CPXM1Q96SM3 AC008764.6-201ENST00000595909 2069 ntBASIC19.07■□□□□ 0.64
CPXM1Q96SM3 ACOT7-202ENST00000377842 1813 ntAPPRIS ALT2 TSL 1 (best) BASIC19.07■□□□□ 0.64
CPXM1Q96SM3 SMIM24-201ENST00000215531 1329 ntAPPRIS P2 TSL 1 (best) BASIC19.07■□□□□ 0.64
CPXM1Q96SM3 ZNF131-206ENST00000505606 3209 ntAPPRIS P1 TSL 5 BASIC19.07■□□□□ 0.64
CPXM1Q96SM3 WDTC1-201ENST00000319394 4819 ntAPPRIS ALT1 TSL 1 (best) BASIC19.07■□□□□ 0.64
CPXM1Q96SM3 PTPRJ-202ENST00000440289 3158 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
CPXM1Q96SM3 GALNT13-201ENST00000392825 5536 ntAPPRIS P1 TSL 2 BASIC19.07■□□□□ 0.64
CPXM1Q96SM3 EMX1-202ENST00000394111 1528 ntTSL 3 BASIC19.07■□□□□ 0.64
CPXM1Q96SM3 CBX1-201ENST00000225603 2232 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
CPXM1Q96SM3 PLA2G4C-222ENST00000599921 1984 ntAPPRIS P3 TSL 1 (best) BASIC19.07■□□□□ 0.64
CPXM1Q96SM3 AGTRAP-201ENST00000314340 1107 ntAPPRIS P3 TSL 1 (best) BASIC19.07■□□□□ 0.64
CPXM1Q96SM3 TBPL1-203ENST00000367871 808 ntTSL 2 BASIC19.07■□□□□ 0.64
CPXM1Q96SM3 AL645929.1-201ENST00000420084 975 ntBASIC19.07■□□□□ 0.64
CPXM1Q96SM3 DAP-202ENST00000432074 1048 ntTSL 2 BASIC19.07■□□□□ 0.64
CPXM1Q96SM3 AP005717.1-202ENST00000523563 419 ntTSL 3 BASIC19.07■□□□□ 0.64
CPXM1Q96SM3 TMEM218-206ENST00000527766 812 ntAPPRIS P1 TSL 3 BASIC19.07■□□□□ 0.64
CPXM1Q96SM3 PPOX-214ENST00000535223 664 ntTSL 3 BASIC19.07■□□□□ 0.64
CPXM1Q96SM3 IFI27L1-206ENST00000554562 571 ntTSL 3 BASIC19.07■□□□□ 0.64
CPXM1Q96SM3 AC027682.4-201ENST00000605277 798 ntTSL 5 BASIC19.07■□□□□ 0.64
CPXM1Q96SM3 MALAT1-215ENST00000619449 794 ntTSL 3 BASIC19.07■□□□□ 0.64
Retrieved 100 of 98,524 protein–RNA pairs in 20.2 ms