Protein–RNA interactions for Protein: Q96RK4

BBS4, Bardet-Biedl syndrome 4 protein, humanhuman

Predictions only

Length 519 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BBS4Q96RK4 PTPRU-202ENST00000373779 5579 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
BBS4Q96RK4 ACD-215ENST00000620761 1483 ntAPPRIS ALT2 TSL 1 (best) BASIC17.24■□□□□ 0.35
BBS4Q96RK4 LYSMD4-201ENST00000332728 2847 ntTSL 4 BASIC17.24■□□□□ 0.35
BBS4Q96RK4 NOMO3-201ENST00000263012 3911 ntAPPRIS ALT2 TSL 1 (best) BASIC17.24■□□□□ 0.35
BBS4Q96RK4 SLC37A2-203ENST00000403796 2910 ntAPPRIS ALT1 TSL 2 BASIC17.24■□□□□ 0.35
BBS4Q96RK4 WDSUB1-203ENST00000392796 1812 ntAPPRIS P1 TSL 2 BASIC17.24■□□□□ 0.35
BBS4Q96RK4 DHRS11-210ENST00000611337 1341 ntTSL 5 BASIC17.23■□□□□ 0.35
BBS4Q96RK4 PRDM1-202ENST00000369091 2612 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
BBS4Q96RK4 PHGDH-209ENST00000641074 1780 ntBASIC17.23■□□□□ 0.35
BBS4Q96RK4 POLD3-203ENST00000527458 2122 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
BBS4Q96RK4 MEST-201ENST00000223215 2465 ntAPPRIS P4 TSL 1 (best) BASIC17.23■□□□□ 0.35
BBS4Q96RK4 CDX4-201ENST00000373514 1515 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
BBS4Q96RK4 FAM213B-202ENST00000378425 2665 ntAPPRIS ALT2 TSL 2 BASIC17.23■□□□□ 0.35
BBS4Q96RK4 AC005865.2-201ENST00000505276 2303 ntTSL 2 BASIC17.23■□□□□ 0.35
BBS4Q96RK4 AL096828.2-201ENST00000567259 1965 ntBASIC17.23■□□□□ 0.35
BBS4Q96RK4 KDM4B-201ENST00000159111 5593 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
BBS4Q96RK4 OCIAD2-201ENST00000273860 636 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
BBS4Q96RK4 SCGB3A1-201ENST00000292641 521 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
BBS4Q96RK4 ROMO1-205ENST00000397416 288 ntAPPRIS P1 TSL 3 BASIC17.23■□□□□ 0.35
BBS4Q96RK4 AC007952.1-201ENST00000399087 553 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
BBS4Q96RK4 AC007952.2-202ENST00000399093 556 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
BBS4Q96RK4 RPS20-210ENST00000523936 899 ntTSL 2 BASIC17.23■□□□□ 0.35
BBS4Q96RK4 FOSL1-203ENST00000531493 1200 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
BBS4Q96RK4 PRTN3-202ENST00000544537 1036 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
BBS4Q96RK4 BCL2L12-208ENST00000600947 633 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
BBS4Q96RK4 SYNGR4-204ENST00000601610 859 ntTSL 3 BASIC17.23■□□□□ 0.35
BBS4Q96RK4 PHOSPHO2-206ENST00000616481 1252 ntAPPRIS P1 TSL 3 BASIC17.23■□□□□ 0.35
BBS4Q96RK4 PHOSPHO2-208ENST00000617738 1053 ntAPPRIS P1 TSL 2 BASIC17.23■□□□□ 0.35
BBS4Q96RK4 OCIAD2-210ENST00000620187 697 ntTSL 3 BASIC17.23■□□□□ 0.35
BBS4Q96RK4 AC106017.2-202ENST00000628484 536 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
BBS4Q96RK4 ZNF385A-202ENST00000352268 2076 ntTSL 2 BASIC17.23■□□□□ 0.35
BBS4Q96RK4 TTLL9-205ENST00000375938 2623 ntAPPRIS P2 TSL 2 BASIC17.23■□□□□ 0.35
BBS4Q96RK4 ACSL6-205ENST00000379246 2622 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
BBS4Q96RK4 CCDC3-201ENST00000378825 2731 ntAPPRIS P3 TSL 1 (best) BASIC17.23■□□□□ 0.35
BBS4Q96RK4 NOP14-204ENST00000502735 2723 ntAPPRIS ALT2 TSL 5 BASIC17.23■□□□□ 0.35
BBS4Q96RK4 HPCA-201ENST00000373467 1468 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
BBS4Q96RK4 LINC00535-201ENST00000501400 1914 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
BBS4Q96RK4 LHX8-201ENST00000294638 2373 ntAPPRIS P3 TSL 1 (best) BASIC17.23■□□□□ 0.35
BBS4Q96RK4 NUDT10-202ENST00000376006 2001 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
BBS4Q96RK4 EIPR1-201ENST00000382125 1766 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
BBS4Q96RK4 EXO5-202ENST00000358527 1892 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
BBS4Q96RK4 FNBP1-201ENST00000355681 1977 ntTSL 2 BASIC17.22■□□□□ 0.35
BBS4Q96RK4 KLHDC4-227ENST00000622456 1422 ntTSL 5 BASIC17.22■□□□□ 0.35
BBS4Q96RK4 LINC00634-201ENST00000381348 1510 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
BBS4Q96RK4 LRRC58-201ENST00000295628 7903 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
BBS4Q96RK4 TBC1D3I-202ENST00000618620 1900 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
BBS4Q96RK4 TRAF3IP1-201ENST00000373327 4279 ntAPPRIS P3 TSL 1 (best) BASIC17.22■□□□□ 0.35
BBS4Q96RK4 TDRKH-207ENST00000458431 2768 ntAPPRIS P2 TSL 1 (best) BASIC17.22■□□□□ 0.35
BBS4Q96RK4 SLC35A3-217ENST00000639807 2767 ntTSL 5 BASIC17.22■□□□□ 0.35
BBS4Q96RK4 WHAMMP3-203ENST00000621139 4494 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
BBS4Q96RK4 EXOC3L2-201ENST00000252482 1230 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
BBS4Q96RK4 TPD52L1-202ENST00000368388 2147 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
BBS4Q96RK4 ACTN4-202ENST00000390009 2102 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
BBS4Q96RK4 SMIM1-201ENST00000444870 546 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
BBS4Q96RK4 MAP3K13-213ENST00000454237 526 ntTSL 3 BASIC17.22■□□□□ 0.35
BBS4Q96RK4 CBLN1-202ENST00000536749 718 ntAPPRIS P1 TSL 5 BASIC17.22■□□□□ 0.35
BBS4Q96RK4 AC002094.1-201ENST00000591482 1050 ntTSL 2 BASIC17.22■□□□□ 0.35
BBS4Q96RK4 AC140113.3-201ENST00000605663 199 ntBASIC17.22■□□□□ 0.35
BBS4Q96RK4 RNF187-203ENST00000639044 708 ntAPPRIS P2 TSL 1 (best) BASIC17.22■□□□□ 0.35
BBS4Q96RK4 MEN1-203ENST00000337652 3162 ntAPPRIS P3 TSL 5 BASIC17.22■□□□□ 0.35
BBS4Q96RK4 CABIN1-202ENST00000337989 2422 ntAPPRIS ALT2 TSL 1 (best) BASIC17.22■□□□□ 0.35
BBS4Q96RK4 DAPK2-205ENST00000558069 1473 ntTSL 5 BASIC17.22■□□□□ 0.35
BBS4Q96RK4 ARHGAP8-202ENST00000356099 1584 ntAPPRIS P3 TSL 1 (best) BASIC17.22■□□□□ 0.35
BBS4Q96RK4 KCNH2-203ENST00000430723 2648 ntTSL 5 BASIC17.22■□□□□ 0.35
BBS4Q96RK4 B4GALT4-202ENST00000393765 2459 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
BBS4Q96RK4 STRA6-209ENST00000563965 2565 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
BBS4Q96RK4 CDH23-205ENST00000398809 4533 ntTSL 5 BASIC17.22■□□□□ 0.35
BBS4Q96RK4 FAM213B-201ENST00000378424 2765 ntAPPRIS ALT2 TSL 5 BASIC17.22■□□□□ 0.35
BBS4Q96RK4 WNT5B-203ENST00000537031 1437 ntAPPRIS P1 TSL 2 BASIC17.21■□□□□ 0.35
BBS4Q96RK4 CCDC88C-203ENST00000389856 1641 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
BBS4Q96RK4 MYBPH-201ENST00000255416 1805 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
BBS4Q96RK4 PDS5A-201ENST00000303538 7176 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
BBS4Q96RK4 ULK3-220ENST00000569437 2611 ntAPPRIS ALT1 TSL 1 (best) BASIC17.21■□□□□ 0.35
BBS4Q96RK4 GTPBP2-202ENST00000307126 2933 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
BBS4Q96RK4 TMEM65-201ENST00000297632 9029 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
BBS4Q96RK4 ARHGAP11A-201ENST00000361627 5898 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
BBS4Q96RK4 RGS12-203ENST00000344733 5469 ntAPPRIS P4 TSL 1 (best) BASIC17.21■□□□□ 0.35
BBS4Q96RK4 TEF-201ENST00000266304 4394 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
BBS4Q96RK4 ENTPD6-202ENST00000360031 2766 ntAPPRIS ALT2 TSL 1 (best) BASIC17.21■□□□□ 0.35
BBS4Q96RK4 NOMO2-202ENST00000381474 3911 ntAPPRIS ALT2 TSL 5 BASIC17.21■□□□□ 0.35
BBS4Q96RK4 TSPO2-202ENST00000373161 958 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
BBS4Q96RK4 ROMO1-202ENST00000374072 350 ntTSL 5 BASIC17.21■□□□□ 0.35
BBS4Q96RK4 ICAM1-202ENST00000423829 1296 ntTSL 2 BASIC17.21■□□□□ 0.35
BBS4Q96RK4 MUC1-211ENST00000438413 927 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
BBS4Q96RK4 CR769775.1-204ENST00000439760 747 ntTSL 5 BASIC17.21■□□□□ 0.35
BBS4Q96RK4 AL365295.1-202ENST00000456100 562 ntTSL 4 BASIC17.21■□□□□ 0.35
BBS4Q96RK4 TSPO2-203ENST00000470917 699 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
BBS4Q96RK4 NDUFV2-207ENST00000497577 868 ntTSL 2 BASIC17.21■□□□□ 0.35
BBS4Q96RK4 SNCB-205ENST00000510387 730 ntAPPRIS P1 TSL 2 BASIC17.21■□□□□ 0.35
BBS4Q96RK4 SLC9A3R2-208ENST00000566198 1199 ntTSL 2 BASIC17.21■□□□□ 0.35
BBS4Q96RK4 MIR3917-201ENST00000580971 93 ntBASIC17.21■□□□□ 0.35
BBS4Q96RK4 PMAIP1-202ENST00000316660 1948 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
BBS4Q96RK4 C12orf65-202ENST00000366329 1901 ntAPPRIS P2 TSL 2 BASIC17.21■□□□□ 0.35
BBS4Q96RK4 CLASRP-203ENST00000391953 1941 ntTSL 2 BASIC17.21■□□□□ 0.35
BBS4Q96RK4 PNLDC1-207ENST00000610273 1940 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
BBS4Q96RK4 FAM210A-201ENST00000322247 4340 ntAPPRIS P1 TSL 2 BASIC17.21■□□□□ 0.35
BBS4Q96RK4 AC138028.4-201ENST00000564984 1845 ntBASIC17.21■□□□□ 0.35
BBS4Q96RK4 RUNX2-201ENST00000359524 5390 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
BBS4Q96RK4 VIPR1-201ENST00000325123 2773 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
BBS4Q96RK4 AC118553.2-203ENST00000639037 2590 ntAPPRIS P5 TSL 5 BASIC17.21■□□□□ 0.35
Retrieved 100 of 98,524 protein–RNA pairs in 27.7 ms