Protein–RNA interactions for Protein: Q96MD7

C9orf85, Uncharacterized protein C9orf85, humanhuman

Predictions only

Length 179 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf85Q96MD7 FST-202ENST00000396947 2538 ntTSL 5 BASIC13.17□□□□□ -0.3
C9orf85Q96MD7 RNF2-201ENST00000367509 1677 ntTSL 2 BASIC13.17□□□□□ -0.3
C9orf85Q96MD7 TUFM-201ENST00000313511 2071 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
C9orf85Q96MD7 ADCK5-201ENST00000308860 1949 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
C9orf85Q96MD7 SEL1L3-202ENST00000399878 4520 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
C9orf85Q96MD7 ZNF346-208ENST00000511834 2306 ntTSL 5 BASIC13.17□□□□□ -0.3
C9orf85Q96MD7 SMOC1-201ENST00000361956 2040 ntAPPRIS ALT1 TSL 1 (best) BASIC13.17□□□□□ -0.3
C9orf85Q96MD7 C1orf159-204ENST00000379339 2429 ntAPPRIS ALT2 TSL 2 BASIC13.17□□□□□ -0.3
C9orf85Q96MD7 FIBCD1-201ENST00000372337 1868 ntTSL 5 BASIC13.16□□□□□ -0.3
C9orf85Q96MD7 PGM5-202ENST00000396396 3338 ntAPPRIS P1 TSL 2 BASIC13.16□□□□□ -0.3
C9orf85Q96MD7 NAA60-201ENST00000360862 2522 ntTSL 2 BASIC13.16□□□□□ -0.3
C9orf85Q96MD7 SDHA-213ENST00000510361 2148 ntTSL 2 BASIC13.16□□□□□ -0.3
C9orf85Q96MD7 ERI1-203ENST00000519292 2107 ntAPPRIS P1 TSL 2 BASIC13.16□□□□□ -0.3
C9orf85Q96MD7 DKK3-203ENST00000525493 1326 ntTSL 2 BASIC13.16□□□□□ -0.3
C9orf85Q96MD7 PHF20L1-209ENST00000395386 6237 ntAPPRIS P1 TSL 5 BASIC13.16□□□□□ -0.3
C9orf85Q96MD7 PLCG1-201ENST00000244007 5285 ntAPPRIS P4 TSL 5 BASIC13.16□□□□□ -0.3
C9orf85Q96MD7 PYGL-201ENST00000216392 3048 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
C9orf85Q96MD7 ZNF140-207ENST00000440550 1663 ntTSL 2 BASIC13.16□□□□□ -0.3
C9orf85Q96MD7 WAC-202ENST00000347934 2839 ntTSL 5 BASIC13.16□□□□□ -0.3
C9orf85Q96MD7 MCM9-201ENST00000316068 2442 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
C9orf85Q96MD7 CT47A4-201ENST00000415858 1298 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
C9orf85Q96MD7 CT47A9-201ENST00000417256 1298 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
C9orf85Q96MD7 CT47A6-201ENST00000419194 1298 ntAPPRIS P1 TSL 5 BASIC13.16□□□□□ -0.3
C9orf85Q96MD7 CT47A10-201ENST00000430448 1298 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
C9orf85Q96MD7 CT47A5-201ENST00000439466 1298 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
C9orf85Q96MD7 CT47A3-201ENST00000441330 1298 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
C9orf85Q96MD7 CT47A8-201ENST00000457977 1298 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
C9orf85Q96MD7 CT47A2-201ENST00000458218 1298 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
C9orf85Q96MD7 AC092718.1-201ENST00000501068 1088 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
C9orf85Q96MD7 ARHGEF28-214ENST00000545377 6351 ntAPPRIS P3 TSL 5 BASIC13.16□□□□□ -0.3
C9orf85Q96MD7 FITM1-202ENST00000559294 800 ntBASIC13.16□□□□□ -0.3
C9orf85Q96MD7 ETFA-216ENST00000560726 942 ntTSL 3 BASIC13.16□□□□□ -0.3
C9orf85Q96MD7 Z99916.2-201ENST00000604037 246 ntBASIC13.16□□□□□ -0.3
C9orf85Q96MD7 AC116562.4-202ENST00000641738 218 ntBASIC13.16□□□□□ -0.3
C9orf85Q96MD7 AC140125.2-201ENST00000502515 1517 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
C9orf85Q96MD7 NARF-204ENST00000390006 1766 ntTSL 2 BASIC13.16□□□□□ -0.3
C9orf85Q96MD7 SEMA3B-202ENST00000418576 1765 ntTSL 2 BASIC13.16□□□□□ -0.3
C9orf85Q96MD7 TXNRD2-218ENST00000542719 2024 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
C9orf85Q96MD7 LRCH3-201ENST00000334859 2258 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
C9orf85Q96MD7 PDCD7-201ENST00000204549 2851 ntAPPRIS P2 TSL 1 (best) BASIC13.16□□□□□ -0.3
C9orf85Q96MD7 PP7080-201ENST00000342584 1876 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
C9orf85Q96MD7 CCM2-207ENST00000475551 2471 ntAPPRIS ALT2 TSL 2 BASIC13.16□□□□□ -0.3
C9orf85Q96MD7 GNAZ-203ENST00000615612 3333 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
C9orf85Q96MD7 GYPC-202ENST00000356887 2067 ntAPPRIS ALT2 TSL 1 (best) BASIC13.16□□□□□ -0.3
C9orf85Q96MD7 ACSS2-201ENST00000253382 2925 ntTSL 2 BASIC13.16□□□□□ -0.3
C9orf85Q96MD7 ETNK2-203ENST00000367202 2434 ntAPPRIS P3 TSL 1 (best) BASIC13.15□□□□□ -0.3
C9orf85Q96MD7 ADCY8-201ENST00000286355 5938 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
C9orf85Q96MD7 CLDND1-204ENST00000394185 2159 ntAPPRIS P1 TSL 5 BASIC13.15□□□□□ -0.3
C9orf85Q96MD7 TAB2-209ENST00000637181 4230 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
C9orf85Q96MD7 RGMB-AS1-201ENST00000498871 1903 ntTSL 2 BASIC13.15□□□□□ -0.3
C9orf85Q96MD7 TIMM8A-201ENST00000372902 1664 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
C9orf85Q96MD7 UVSSA-209ENST00000512728 1668 ntAPPRIS ALT2 TSL 1 (best) BASIC13.15□□□□□ -0.3
C9orf85Q96MD7 AC079922.2-201ENST00000457336 2022 ntTSL 2 BASIC13.15□□□□□ -0.3
C9orf85Q96MD7 TAF4B-201ENST00000269142 5260 ntAPPRIS P3 TSL 1 (best) BASIC13.15□□□□□ -0.3
C9orf85Q96MD7 EIF3J-201ENST00000261868 2569 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
C9orf85Q96MD7 EML3-212ENST00000494176 2901 ntTSL 2 BASIC13.15□□□□□ -0.3
C9orf85Q96MD7 EML3-216ENST00000529309 2909 ntTSL 2 BASIC13.15□□□□□ -0.3
C9orf85Q96MD7 PRDM8-203ENST00000504452 3706 ntAPPRIS P1 TSL 5 BASIC13.15□□□□□ -0.3
C9orf85Q96MD7 APP-202ENST00000348990 3355 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
C9orf85Q96MD7 ZNF133-212ENST00000622607 2660 ntAPPRIS ALT2 TSL 4 BASIC13.15□□□□□ -0.3
C9orf85Q96MD7 CTSB-232ENST00000534510 1989 ntAPPRIS P1 TSL 5 BASIC13.15□□□□□ -0.3
C9orf85Q96MD7 SIGIRR-201ENST00000332725 1639 ntAPPRIS P1 TSL 2 BASIC13.15□□□□□ -0.3
C9orf85Q96MD7 CAPN10-202ENST00000270364 1267 ntTSL 2 BASIC13.15□□□□□ -0.3
C9orf85Q96MD7 CXCL3-201ENST00000296026 1075 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
C9orf85Q96MD7 NKAIN4-201ENST00000370307 793 ntTSL 5 BASIC13.15□□□□□ -0.3
C9orf85Q96MD7 TMSB4X-201ENST00000380633 495 ntAPPRIS P1 TSL 3 BASIC13.15□□□□□ -0.3
C9orf85Q96MD7 AL162231.1-203ENST00000416454 465 ntAPPRIS ALT2 TSL 2 BASIC13.15□□□□□ -0.3
C9orf85Q96MD7 GRAMD4P1-201ENST00000435181 1110 ntBASIC13.15□□□□□ -0.3
C9orf85Q96MD7 AC007663.1-201ENST00000438948 1240 ntBASIC13.15□□□□□ -0.3
C9orf85Q96MD7 LINC01063-201ENST00000441644 348 ntTSL 3 BASIC13.15□□□□□ -0.3
C9orf85Q96MD7 AL365259.1-203ENST00000451660 707 ntTSL 3 BASIC13.15□□□□□ -0.3
C9orf85Q96MD7 PACRGL-207ENST00000502938 810 ntTSL 4 BASIC13.15□□□□□ -0.3
C9orf85Q96MD7 TMEM263-208ENST00000551489 621 ntTSL 4 BASIC13.15□□□□□ -0.3
C9orf85Q96MD7 PDCD5-207ENST00000590247 699 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
C9orf85Q96MD7 AC010240.3-201ENST00000607688 395 ntBASIC13.15□□□□□ -0.3
C9orf85Q96MD7 AC010653.2-201ENST00000623505 997 ntBASIC13.15□□□□□ -0.3
C9orf85Q96MD7 ANKRD36-207ENST00000639293 1168 ntAPPRIS ALT2 TSL 5 BASIC13.15□□□□□ -0.3
C9orf85Q96MD7 SDCBP-202ENST00000413219 2086 ntAPPRIS P3 TSL 2 BASIC13.15□□□□□ -0.3
C9orf85Q96MD7 PSRC1-203ENST00000369907 1717 ntAPPRIS P3 TSL 1 (best) BASIC13.15□□□□□ -0.3
C9orf85Q96MD7 BPIFB4-201ENST00000375483 2159 ntAPPRIS P1 TSL 5 BASIC13.15□□□□□ -0.3
C9orf85Q96MD7 TMEM214-201ENST00000238788 2990 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
C9orf85Q96MD7 TLK2-203ENST00000346027 3449 ntAPPRIS P3 TSL 1 (best) BASIC13.15□□□□□ -0.3
C9orf85Q96MD7 MYBPH-201ENST00000255416 1805 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
C9orf85Q96MD7 RAB39A-201ENST00000320578 1830 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
C9orf85Q96MD7 ELN-202ENST00000320399 2274 ntAPPRIS ALT2 TSL 5 BASIC13.15□□□□□ -0.3
C9orf85Q96MD7 AANAT-201ENST00000250615 1913 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
C9orf85Q96MD7 PTPDC1-202ENST00000375360 4517 ntAPPRIS ALT2 TSL 1 (best) BASIC13.15□□□□□ -0.3
C9orf85Q96MD7 GLB1-202ENST00000307377 2018 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
C9orf85Q96MD7 FCGRT-202ENST00000426395 1559 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
C9orf85Q96MD7 ARHGAP22-206ENST00000435790 2595 ntAPPRIS ALT2 TSL 2 BASIC13.15□□□□□ -0.3
C9orf85Q96MD7 HDAC10-201ENST00000216271 2687 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.31
C9orf85Q96MD7 VHL-202ENST00000345392 2696 ntTSL 1 (best) BASIC13.15□□□□□ -0.31
C9orf85Q96MD7 PDE1C-206ENST00000396193 5109 ntAPPRIS P4 TSL 2 BASIC13.15□□□□□ -0.31
C9orf85Q96MD7 DHX33-202ENST00000433302 2225 ntTSL 1 (best) BASIC13.15□□□□□ -0.31
C9orf85Q96MD7 NEIL1-221ENST00000569035 1797 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.31
C9orf85Q96MD7 MAP4K4-202ENST00000324219 7526 ntTSL 5 BASIC13.14□□□□□ -0.31
C9orf85Q96MD7 QRICH1-201ENST00000357496 3083 ntAPPRIS P1 TSL 2 BASIC13.14□□□□□ -0.31
C9orf85Q96MD7 ZBTB16-201ENST00000335953 2523 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
C9orf85Q96MD7 FBXW9-203ENST00000587955 1437 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
C9orf85Q96MD7 MRAS-204ENST00000464896 1534 ntTSL 2 BASIC13.14□□□□□ -0.31
Retrieved 100 of 98,524 protein–RNA pairs in 29.4 ms