Protein–RNA interactions for Protein: Q8NF37

LPCAT1, Lysophosphatidylcholine acyltransferase 1, humanhuman

Predictions only

Length 534 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LPCAT1Q8NF37 PSMD8-207ENST00000592035 1581 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
LPCAT1Q8NF37 FBXO44-201ENST00000251546 1896 ntTSL 2 BASIC18.32■□□□□ 0.52
LPCAT1Q8NF37 CBS-203ENST00000398158 2453 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
LPCAT1Q8NF37 CBSL-206ENST00000624406 2453 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
LPCAT1Q8NF37 SLCO4A1-201ENST00000217159 2776 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
LPCAT1Q8NF37 RAPH1-201ENST00000308091 2768 ntAPPRIS ALT2 TSL 1 (best) BASIC18.32■□□□□ 0.52
LPCAT1Q8NF37 STARD10-218ENST00000543304 1513 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
LPCAT1Q8NF37 SHKBP1-201ENST00000291842 2363 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
LPCAT1Q8NF37 NARF-204ENST00000390006 1766 ntTSL 2 BASIC18.32■□□□□ 0.52
LPCAT1Q8NF37 LRCH1-201ENST00000311191 4710 ntAPPRIS ALT2 TSL 1 (best) BASIC18.32■□□□□ 0.52
LPCAT1Q8NF37 STARD4-203ENST00000502322 1467 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
LPCAT1Q8NF37 TTLL9-205ENST00000375938 2623 ntAPPRIS P2 TSL 2 BASIC18.32■□□□□ 0.52
LPCAT1Q8NF37 POMC-204ENST00000405623 1426 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
LPCAT1Q8NF37 PLD3-205ENST00000409419 1966 ntAPPRIS P1 TSL 5 BASIC18.31■□□□□ 0.52
LPCAT1Q8NF37 SKOR1-204ENST00000554240 3597 ntAPPRIS ALT2 TSL 5 BASIC18.31■□□□□ 0.52
LPCAT1Q8NF37 TM2D2-201ENST00000397070 1631 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
LPCAT1Q8NF37 REXO1L9P-201ENST00000604264 2108 ntBASIC18.31■□□□□ 0.52
LPCAT1Q8NF37 PDLIM7-203ENST00000359895 1567 ntAPPRIS ALT2 TSL 1 (best) BASIC18.31■□□□□ 0.52
LPCAT1Q8NF37 ACSL6-205ENST00000379246 2622 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
LPCAT1Q8NF37 CACNA1B-203ENST00000371355 9647 ntAPPRIS ALT2 TSL 5 BASIC18.31■□□□□ 0.52
LPCAT1Q8NF37 PARK7-201ENST00000338639 949 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
LPCAT1Q8NF37 NFU1-202ENST00000394305 1058 ntTSL 5 BASIC18.31■□□□□ 0.52
LPCAT1Q8NF37 AC093901.1-201ENST00000414886 778 ntTSL 5 BASIC18.31■□□□□ 0.52
LPCAT1Q8NF37 TTTY14-203ENST00000447937 920 ntTSL 3 BASIC18.31■□□□□ 0.52
LPCAT1Q8NF37 AP006284.1-202ENST00000527113 527 ntTSL 4 BASIC18.31■□□□□ 0.52
LPCAT1Q8NF37 AL121956.5-201ENST00000625261 221 ntBASIC18.31■□□□□ 0.52
LPCAT1Q8NF37 IMP3-201ENST00000314852 2028 ntAPPRIS P1 TSL 2 BASIC18.31■□□□□ 0.52
LPCAT1Q8NF37 GPC2-201ENST00000292377 2532 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
LPCAT1Q8NF37 CHPF-201ENST00000243776 3013 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
LPCAT1Q8NF37 MAPKAPK2-202ENST00000367103 2961 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
LPCAT1Q8NF37 JKAMP-201ENST00000261247 1726 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
LPCAT1Q8NF37 MAP2K5-202ENST00000340972 1491 ntTSL 2 BASIC18.31■□□□□ 0.52
LPCAT1Q8NF37 PLCG1-AS1-201ENST00000454626 1462 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
LPCAT1Q8NF37 ANKS3-201ENST00000304283 2662 ntAPPRIS P1 TSL 2 BASIC18.31■□□□□ 0.52
LPCAT1Q8NF37 MSLN-202ENST00000545450 2162 ntAPPRIS ALT2 TSL 1 (best) BASIC18.31■□□□□ 0.52
LPCAT1Q8NF37 ABALON-201ENST00000629058 1903 ntBASIC18.31■□□□□ 0.52
LPCAT1Q8NF37 ARPC4-201ENST00000397261 2582 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
LPCAT1Q8NF37 RPH3A-203ENST00000543106 2581 ntAPPRIS ALT2 TSL 2 BASIC18.31■□□□□ 0.52
LPCAT1Q8NF37 TNFAIP2-201ENST00000333007 4175 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
LPCAT1Q8NF37 SHE-201ENST00000304760 6243 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
LPCAT1Q8NF37 EMX2-201ENST00000442245 2710 ntTSL 2 BASIC18.3■□□□□ 0.52
LPCAT1Q8NF37 TCF25-225ENST00000614813 2047 ntTSL 5 BASIC18.3■□□□□ 0.52
LPCAT1Q8NF37 NOMO2-212ENST00000622306 4252 ntAPPRIS P3 TSL 1 (best) BASIC18.3■□□□□ 0.52
LPCAT1Q8NF37 AP001626.1-201ENST00000424890 2854 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
LPCAT1Q8NF37 ADORA2A-214ENST00000611543 2412 ntAPPRIS P1 TSL 5 BASIC18.3■□□□□ 0.52
LPCAT1Q8NF37 ZNF667-AS1-201ENST00000585445 1521 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
LPCAT1Q8NF37 TPGS2-219ENST00000593035 1727 ntAPPRIS ALT2 TSL 2 BASIC18.3■□□□□ 0.52
LPCAT1Q8NF37 LONP1-201ENST00000360614 3236 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
LPCAT1Q8NF37 KHDC1-201ENST00000257765 1134 ntAPPRIS P3 TSL 1 (best) BASIC18.3■□□□□ 0.52
LPCAT1Q8NF37 RPA2-201ENST00000313433 1237 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
LPCAT1Q8NF37 CD1E-210ENST00000368165 1003 ntAPPRIS ALT2 TSL 1 (best) BASIC18.3■□□□□ 0.52
LPCAT1Q8NF37 GNG5-202ENST00000370645 790 ntAPPRIS P1 TSL 2 BASIC18.3■□□□□ 0.52
LPCAT1Q8NF37 AC131097.3-201ENST00000413820 1228 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
LPCAT1Q8NF37 CD1E-214ENST00000452291 745 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
LPCAT1Q8NF37 MRPL52-210ENST00000555345 895 ntTSL 2 BASIC18.3■□□□□ 0.52
LPCAT1Q8NF37 KHDC1-207ENST00000610435 1101 ntAPPRIS P3 TSL 5 BASIC18.3■□□□□ 0.52
LPCAT1Q8NF37 DACH1-202ENST00000613252 5233 ntAPPRIS P2 TSL 1 (best) BASIC18.3■□□□□ 0.52
LPCAT1Q8NF37 AL354751.1-201ENST00000412768 1863 ntBASIC18.3■□□□□ 0.52
LPCAT1Q8NF37 DAG1-222ENST00000545947 5829 ntAPPRIS P1 TSL 5 BASIC18.3■□□□□ 0.52
LPCAT1Q8NF37 LARGE2-206ENST00000529052 2459 ntAPPRIS ALT2 TSL 2 BASIC18.3■□□□□ 0.52
LPCAT1Q8NF37 RPL3-201ENST00000216146 1442 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
LPCAT1Q8NF37 AC142086.1-202ENST00000398669 1839 ntTSL 2 BASIC18.3■□□□□ 0.52
LPCAT1Q8NF37 HEXB-207ENST00000511181 2021 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
LPCAT1Q8NF37 PRELID3A-209ENST00000592149 2001 ntTSL 2 BASIC18.3■□□□□ 0.52
LPCAT1Q8NF37 PTPA-201ENST00000337738 2845 ntTSL 2 BASIC18.3■□□□□ 0.52
LPCAT1Q8NF37 EGFL6-201ENST00000361306 2398 ntAPPRIS P3 TSL 1 (best) BASIC18.3■□□□□ 0.52
LPCAT1Q8NF37 EMD-202ENST00000369842 1379 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
LPCAT1Q8NF37 METTL5-207ENST00000410097 1370 ntTSL 2 BASIC18.3■□□□□ 0.52
LPCAT1Q8NF37 TMEM155-201ENST00000337677 2313 ntAPPRIS P2 TSL 1 (best) BASIC18.29■□□□□ 0.52
LPCAT1Q8NF37 PFDN6-206ENST00000463584 1915 ntTSL 3 BASIC18.29■□□□□ 0.52
LPCAT1Q8NF37 SPRED3-201ENST00000338502 4778 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
LPCAT1Q8NF37 NTMT1-203ENST00000372483 1315 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
LPCAT1Q8NF37 MAPRE3-201ENST00000233121 1892 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
LPCAT1Q8NF37 AR-209ENST00000613054 3532 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
LPCAT1Q8NF37 SPPL2C-201ENST00000329196 2238 ntAPPRIS P1 BASIC18.29■□□□□ 0.52
LPCAT1Q8NF37 KRT89P-201ENST00000620027 1478 ntBASIC18.29■□□□□ 0.52
LPCAT1Q8NF37 CNIH3-201ENST00000272133 2558 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
LPCAT1Q8NF37 DOK7-201ENST00000340083 2562 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
LPCAT1Q8NF37 DOK7-203ENST00000507039 2551 ntTSL 2 BASIC18.29■□□□□ 0.52
LPCAT1Q8NF37 FDXR-205ENST00000544854 1827 ntTSL 2 BASIC18.29■□□□□ 0.52
LPCAT1Q8NF37 FAM187B-201ENST00000324675 1184 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
LPCAT1Q8NF37 TBPL1-203ENST00000367871 808 ntTSL 2 BASIC18.29■□□□□ 0.52
LPCAT1Q8NF37 CDC26-201ENST00000374206 872 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
LPCAT1Q8NF37 DUSP15-203ENST00000375966 1077 ntTSL 3 BASIC18.29■□□□□ 0.52
LPCAT1Q8NF37 HES2-202ENST00000377836 507 ntTSL 2 BASIC18.29■□□□□ 0.52
LPCAT1Q8NF37 EEF1D-202ENST00000395119 1249 ntAPPRIS ALT2 TSL 1 (best) BASIC18.29■□□□□ 0.52
LPCAT1Q8NF37 DUSP15-204ENST00000398083 1212 ntTSL 5 BASIC18.29■□□□□ 0.52
LPCAT1Q8NF37 KIRREL3-AS3-201ENST00000404882 831 ntBASIC18.29■□□□□ 0.52
LPCAT1Q8NF37 CRELD2-204ENST00000407217 1230 ntAPPRIS ALT2 TSL 1 (best) BASIC18.29■□□□□ 0.52
LPCAT1Q8NF37 AL603832.1-201ENST00000421943 449 ntTSL 5 BASIC18.29■□□□□ 0.52
LPCAT1Q8NF37 AC005091.1-201ENST00000441955 1190 ntTSL 3 BASIC18.29■□□□□ 0.52
LPCAT1Q8NF37 AP000777.3-201ENST00000538705 491 ntTSL 3 BASIC18.29■□□□□ 0.52
LPCAT1Q8NF37 AL136038.3-201ENST00000561909 1096 ntBASIC18.29■□□□□ 0.52
LPCAT1Q8NF37 NAA38-203ENST00000575071 553 ntTSL 2 BASIC18.29■□□□□ 0.52
LPCAT1Q8NF37 GFOD2-207ENST00000602855 819 ntTSL 3 BASIC18.29■□□□□ 0.52
LPCAT1Q8NF37 WDR6-223ENST00000627177 207 ntTSL 2 BASIC18.29■□□□□ 0.52
LPCAT1Q8NF37 FAM50B-201ENST00000380272 1628 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
LPCAT1Q8NF37 PLCG1-202ENST00000373271 7395 ntAPPRIS ALT1 TSL 1 (best) BASIC18.29■□□□□ 0.52
LPCAT1Q8NF37 LINC00461-203ENST00000504246 2300 ntTSL 2 BASIC18.29■□□□□ 0.52
LPCAT1Q8NF37 SPSB3-201ENST00000301717 1449 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Retrieved 100 of 98,524 protein–RNA pairs in 25.3 ms