Protein–RNA interactions for Protein: Q8NE35

CPEB3, Cytoplasmic polyadenylation element-binding protein 3, humanhuman

Known RBP Predictions only

Length 698 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CPEB3Q8NE35 DFFB-212ENST00000625756 649 ntTSL 5 BASIC15.9■□□□□ 0.14
CPEB3Q8NE35 AC092902.2-222ENST00000626312 568 ntTSL 5 BASIC15.9■□□□□ 0.14
CPEB3Q8NE35 LEFTY2-201ENST00000366820 2287 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
CPEB3Q8NE35 AC008687.8-201ENST00000599795 1748 ntAPPRIS P1 TSL 2 BASIC15.9■□□□□ 0.14
CPEB3Q8NE35 FIBCD1-201ENST00000372337 1868 ntTSL 5 BASIC15.9■□□□□ 0.14
CPEB3Q8NE35 FLYWCH1P1-201ENST00000460917 1874 ntBASIC15.9■□□□□ 0.14
CPEB3Q8NE35 RPS6KA1-204ENST00000374168 3186 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
CPEB3Q8NE35 ZFC3H1-211ENST00000552037 1484 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
CPEB3Q8NE35 ADCK5-201ENST00000308860 1949 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
CPEB3Q8NE35 LINC00535-201ENST00000501400 1914 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
CPEB3Q8NE35 CLMP-201ENST00000448775 5072 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
CPEB3Q8NE35 CHRNB1-201ENST00000306071 2557 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
CPEB3Q8NE35 AC142086.1-202ENST00000398669 1839 ntTSL 2 BASIC15.89■□□□□ 0.13
CPEB3Q8NE35 KRT13-201ENST00000246635 1699 ntAPPRIS P4 TSL 1 (best) BASIC15.89■□□□□ 0.13
CPEB3Q8NE35 C21orf59-201ENST00000290155 1692 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
CPEB3Q8NE35 GLCCI1-201ENST00000223145 4743 ntAPPRIS P2 TSL 1 (best) BASIC15.89■□□□□ 0.13
CPEB3Q8NE35 REPS2-201ENST00000303843 7771 ntAPPRIS ALT2 TSL 1 (best) BASIC15.89■□□□□ 0.13
CPEB3Q8NE35 UBE2E1-202ENST00000346855 1398 ntTSL 3 BASIC15.89■□□□□ 0.13
CPEB3Q8NE35 ZNF655-203ENST00000357864 1370 ntTSL 2 BASIC15.89■□□□□ 0.13
CPEB3Q8NE35 RNFT2-202ENST00000319176 2180 ntTSL 5 BASIC15.89■□□□□ 0.13
CPEB3Q8NE35 CMTM3-201ENST00000361909 2159 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
CPEB3Q8NE35 PXK-206ENST00000463280 2825 ntTSL 2 BASIC15.89■□□□□ 0.13
CPEB3Q8NE35 PDLIM7-203ENST00000359895 1567 ntAPPRIS ALT2 TSL 1 (best) BASIC15.89■□□□□ 0.13
CPEB3Q8NE35 PSMD8-207ENST00000592035 1581 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
CPEB3Q8NE35 PYDC1-201ENST00000302964 813 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
CPEB3Q8NE35 MALL-203ENST00000427178 1070 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
CPEB3Q8NE35 AC112907.2-201ENST00000448639 330 ntBASIC15.89■□□□□ 0.13
CPEB3Q8NE35 GSTZ1-218ENST00000557053 580 ntTSL 3 BASIC15.89■□□□□ 0.13
CPEB3Q8NE35 DCTN5-208ENST00000568589 772 ntTSL 2 BASIC15.89■□□□□ 0.13
CPEB3Q8NE35 AL136038.4-201ENST00000603606 1261 ntBASIC15.89■□□□□ 0.13
CPEB3Q8NE35 HYMAI.1-201ENST00000620949 238 ntBASIC15.89■□□□□ 0.13
CPEB3Q8NE35 ZNF668-202ENST00000394983 2717 ntAPPRIS P1 TSL 5 BASIC15.89■□□□□ 0.13
CPEB3Q8NE35 SCYL1-203ENST00000420247 2583 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
CPEB3Q8NE35 RCAN3-205ENST00000436717 2574 ntTSL 3 BASIC15.89■□□□□ 0.13
CPEB3Q8NE35 LANCL3-201ENST00000378619 3063 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
CPEB3Q8NE35 KIFC3-201ENST00000379655 3427 ntAPPRIS P3 TSL 1 (best) BASIC15.89■□□□□ 0.13
CPEB3Q8NE35 CHRFAM7A-202ENST00000397827 2794 ntTSL 5 BASIC15.89■□□□□ 0.13
CPEB3Q8NE35 FCMR-201ENST00000367091 1950 ntAPPRIS P3 TSL 1 (best) BASIC15.89■□□□□ 0.13
CPEB3Q8NE35 CAPN5-205ENST00000529629 2333 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
CPEB3Q8NE35 MSLN-202ENST00000545450 2162 ntAPPRIS ALT2 TSL 1 (best) BASIC15.89■□□□□ 0.13
CPEB3Q8NE35 HTR7P1-202ENST00000624664 4411 ntBASIC15.88■□□□□ 0.13
CPEB3Q8NE35 MAPRE3-201ENST00000233121 1892 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
CPEB3Q8NE35 MID1IP1-202ENST00000378474 1889 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
CPEB3Q8NE35 GPT-202ENST00000394955 1885 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
CPEB3Q8NE35 EWSR1-207ENST00000406548 2207 ntAPPRIS ALT2 TSL 1 (best) BASIC15.88■□□□□ 0.13
CPEB3Q8NE35 SYNGAP1-202ENST00000418600 5828 ntTSL 5 BASIC15.88■□□□□ 0.13
CPEB3Q8NE35 C1QTNF1-209ENST00000581774 1368 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
CPEB3Q8NE35 ACSL6-205ENST00000379246 2622 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
CPEB3Q8NE35 IL15-201ENST00000296545 2472 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
CPEB3Q8NE35 GPATCH3-201ENST00000361720 2123 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
CPEB3Q8NE35 RRN3-205ENST00000563559 2128 ntTSL 5 BASIC15.88■□□□□ 0.13
CPEB3Q8NE35 LAT-204ENST00000395461 1448 ntAPPRIS ALT2 TSL 1 (best) BASIC15.88■□□□□ 0.13
CPEB3Q8NE35 C6orf203-202ENST00000405204 1420 ntAPPRIS P1 TSL 2 BASIC15.88■□□□□ 0.13
CPEB3Q8NE35 SLC6A17-201ENST00000331565 6427 ntAPPRIS P1 TSL 2 BASIC15.88■□□□□ 0.13
CPEB3Q8NE35 SOST-201ENST00000301691 2300 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
CPEB3Q8NE35 GGT3P-201ENST00000412448 2340 ntTSL 2 BASIC15.88■□□□□ 0.13
CPEB3Q8NE35 EMC8-201ENST00000253457 1962 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
CPEB3Q8NE35 AL096828.2-201ENST00000567259 1965 ntBASIC15.88■□□□□ 0.13
CPEB3Q8NE35 TM2D2-201ENST00000397070 1631 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
CPEB3Q8NE35 CENPT-215ENST00000564817 1638 ntAPPRIS ALT2 TSL 5 BASIC15.88■□□□□ 0.13
CPEB3Q8NE35 DNAJC4-201ENST00000321460 1015 ntAPPRIS ALT2 TSL 1 (best) BASIC15.88■□□□□ 0.13
CPEB3Q8NE35 HLA-F-217ENST00000334668 1283 ntAPPRIS ALT2 BASIC15.88■□□□□ 0.13
CPEB3Q8NE35 GUK1-204ENST00000366721 689 ntTSL 3 BASIC15.88■□□□□ 0.13
CPEB3Q8NE35 TSPY8-203ENST00000383005 435 ntTSL 5 BASIC15.88■□□□□ 0.13
CPEB3Q8NE35 MIR1224-201ENST00000408193 85 ntBASIC15.88■□□□□ 0.13
CPEB3Q8NE35 HLA-F-220ENST00000434407 884 ntBASIC15.88■□□□□ 0.13
CPEB3Q8NE35 MYD88-211ENST00000495303 976 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
CPEB3Q8NE35 SLC9A3R2-208ENST00000566198 1199 ntTSL 2 BASIC15.88■□□□□ 0.13
CPEB3Q8NE35 RMI2-205ENST00000576027 818 ntTSL 2 BASIC15.88■□□□□ 0.13
CPEB3Q8NE35 ELAVL1-202ENST00000593807 856 ntTSL 3 BASIC15.88■□□□□ 0.13
CPEB3Q8NE35 RNASET2-213ENST00000611959 1124 ntTSL 5 BASIC15.88■□□□□ 0.13
CPEB3Q8NE35 STRA6-209ENST00000563965 2565 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
CPEB3Q8NE35 SMC4-201ENST00000344722 5356 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
CPEB3Q8NE35 SPPL2C-201ENST00000329196 2238 ntAPPRIS P1 BASIC15.88■□□□□ 0.13
CPEB3Q8NE35 NUMBL-207ENST00000598779 2249 ntAPPRIS ALT2 TSL 1 (best) BASIC15.88■□□□□ 0.13
CPEB3Q8NE35 FBXO44-201ENST00000251546 1896 ntTSL 2 BASIC15.88■□□□□ 0.13
CPEB3Q8NE35 WAC-202ENST00000347934 2839 ntTSL 5 BASIC15.88■□□□□ 0.13
CPEB3Q8NE35 HYAL1-204ENST00000395144 2081 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
CPEB3Q8NE35 WIZ-201ENST00000263381 5695 ntAPPRIS P2 TSL 2 BASIC15.88■□□□□ 0.13
CPEB3Q8NE35 DHRS2-201ENST00000250383 1705 ntAPPRIS P3 TSL 1 (best) BASIC15.88■□□□□ 0.13
CPEB3Q8NE35 SYBU-201ENST00000276646 2870 ntAPPRIS ALT2 TSL 1 (best) BASIC15.88■□□□□ 0.13
CPEB3Q8NE35 MSI2-203ENST00000416426 1714 ntTSL 2 BASIC15.88■□□□□ 0.13
CPEB3Q8NE35 REXO1L9P-201ENST00000604264 2108 ntBASIC15.88■□□□□ 0.13
CPEB3Q8NE35 CLEC10A-201ENST00000254868 1797 ntAPPRIS P3 TSL 1 (best) BASIC15.87■□□□□ 0.13
CPEB3Q8NE35 PLD3-205ENST00000409419 1966 ntAPPRIS P1 TSL 5 BASIC15.87■□□□□ 0.13
CPEB3Q8NE35 FBXL15-201ENST00000224862 2362 ntAPPRIS P2 TSL 1 (best) BASIC15.87■□□□□ 0.13
CPEB3Q8NE35 KCNC4-203ENST00000413138 3018 ntAPPRIS ALT2 TSL 5 BASIC15.87■□□□□ 0.13
CPEB3Q8NE35 DOK4-218ENST00000569548 1848 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
CPEB3Q8NE35 OR6D1P-202ENST00000641007 5290 ntBASIC15.87■□□□□ 0.13
CPEB3Q8NE35 FAM50B-201ENST00000380272 1628 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
CPEB3Q8NE35 WDR45-205ENST00000376358 1432 ntTSL 2 BASIC15.87■□□□□ 0.13
CPEB3Q8NE35 CPEB3-203ENST00000614585 5789 ntAPPRIS P3 TSL 5 BASIC15.87■□□□□ 0.13
CPEB3Q8NE35 YAP1-209ENST00000537274 5350 ntAPPRIS ALT2 TSL 5 BASIC15.87■□□□□ 0.13
CPEB3Q8NE35 NOMO1-201ENST00000287667 4355 ntAPPRIS P2 TSL 1 (best) BASIC15.87■□□□□ 0.13
CPEB3Q8NE35 ADORA1-202ENST00000337894 2919 ntAPPRIS P1 TSL 2 BASIC15.87■□□□□ 0.13
CPEB3Q8NE35 RNPS1-219ENST00000566397 1685 ntTSL 2 BASIC15.87■□□□□ 0.13
CPEB3Q8NE35 C2CD2L-205ENST00000528586 2320 ntTSL 2 BASIC15.87■□□□□ 0.13
CPEB3Q8NE35 PEX11G-201ENST00000221480 1062 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
CPEB3Q8NE35 TMEM190-201ENST00000291934 593 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
CPEB3Q8NE35 PTCRA-201ENST00000304672 1080 ntAPPRIS P3 TSL 1 (best) BASIC15.87■□□□□ 0.13
Retrieved 100 of 98,524 protein–RNA pairs in 23.6 ms