Protein–RNA interactions for Protein: Q8N8F7

LSMEM1, Leucine-rich single-pass membrane protein 1, humanhuman

Predictions only

Length 131 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LSMEM1Q8N8F7 FGFR4-203ENST00000393648 2733 ntAPPRIS ALT2 TSL 2 BASIC16.64■□□□□ 0.25
LSMEM1Q8N8F7 POLI-207ENST00000579434 2705 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
LSMEM1Q8N8F7 GNE-201ENST00000377902 2565 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
LSMEM1Q8N8F7 ARNT-202ENST00000358595 4887 ntAPPRIS P3 TSL 1 (best) BASIC16.64■□□□□ 0.25
LSMEM1Q8N8F7 TBKBP1-204ENST00000622396 2010 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
LSMEM1Q8N8F7 ZCCHC24-202ENST00000372336 4933 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
LSMEM1Q8N8F7 LRRC23-202ENST00000323702 1208 ntAPPRIS ALT2 TSL 1 (best) BASIC16.64■□□□□ 0.25
LSMEM1Q8N8F7 ZFYVE1-202ENST00000394207 1183 ntTSL 2 BASIC16.64■□□□□ 0.25
LSMEM1Q8N8F7 COL11A2-204ENST00000395194 1194 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
LSMEM1Q8N8F7 DHRS4L2-202ENST00000397071 1117 ntTSL 2 BASIC16.64■□□□□ 0.25
LSMEM1Q8N8F7 SLC25A48-202ENST00000412661 1148 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
LSMEM1Q8N8F7 ECEL1P3-201ENST00000427961 737 ntBASIC16.64■□□□□ 0.25
LSMEM1Q8N8F7 AL390719.1-201ENST00000427998 977 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
LSMEM1Q8N8F7 SLC25A48-204ENST00000433282 1111 ntAPPRIS P1 TSL 5 BASIC16.64■□□□□ 0.25
LSMEM1Q8N8F7 FAHD2CP-202ENST00000443258 893 ntTSL 3 BASIC16.64■□□□□ 0.25
LSMEM1Q8N8F7 AC007563.2-201ENST00000447289 552 ntTSL 5 BASIC16.64■□□□□ 0.25
LSMEM1Q8N8F7 ADCYAP1-202ENST00000450565 918 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
LSMEM1Q8N8F7 REEP1-207ENST00000535845 1196 ntTSL 2 BASIC16.64■□□□□ 0.25
LSMEM1Q8N8F7 REEP1-209ENST00000541910 969 ntTSL 2 BASIC16.64■□□□□ 0.25
LSMEM1Q8N8F7 MNT-208ENST00000575394 606 ntTSL 4 BASIC16.64■□□□□ 0.25
LSMEM1Q8N8F7 AC024243.1-201ENST00000609234 778 ntBASIC16.64■□□□□ 0.25
LSMEM1Q8N8F7 RNF187-203ENST00000639044 708 ntAPPRIS P2 TSL 1 (best) BASIC16.64■□□□□ 0.25
LSMEM1Q8N8F7 NDUFA10-214ENST00000620965 1489 ntAPPRIS ALT1 TSL 5 BASIC16.64■□□□□ 0.25
LSMEM1Q8N8F7 TBC1D2-205ENST00000465784 3349 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
LSMEM1Q8N8F7 IL17RC-206ENST00000416074 2342 ntAPPRIS ALT2 TSL 1 (best) BASIC16.64■□□□□ 0.25
LSMEM1Q8N8F7 WSCD1-209ENST00000574232 2129 ntAPPRIS P1 TSL 5 BASIC16.64■□□□□ 0.25
LSMEM1Q8N8F7 SDK1-202ENST00000404826 10397 ntAPPRIS P2 TSL 1 (best) BASIC16.64■□□□□ 0.25
LSMEM1Q8N8F7 CHTOP-203ENST00000368690 2165 ntAPPRIS ALT1 TSL 1 (best) BASIC16.64■□□□□ 0.25
LSMEM1Q8N8F7 CSAD-209ENST00000453446 1774 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
LSMEM1Q8N8F7 WIPI1-202ENST00000546360 1575 ntTSL 2 BASIC16.64■□□□□ 0.25
LSMEM1Q8N8F7 PRSS35-201ENST00000369700 2440 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
LSMEM1Q8N8F7 ELP5-214ENST00000574993 2209 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
LSMEM1Q8N8F7 STK4-201ENST00000372801 2038 ntTSL 2 BASIC16.63■□□□□ 0.25
LSMEM1Q8N8F7 ADAMTS16-203ENST00000511368 2682 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
LSMEM1Q8N8F7 C1orf159-205ENST00000421241 1841 ntAPPRIS P3 TSL 2 BASIC16.63■□□□□ 0.25
LSMEM1Q8N8F7 ACSM2B-208ENST00000565322 1834 ntTSL 2 BASIC16.63■□□□□ 0.25
LSMEM1Q8N8F7 JMJD6-202ENST00000397625 1603 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
LSMEM1Q8N8F7 DCP1B-201ENST00000280665 2086 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
LSMEM1Q8N8F7 DUS1L-201ENST00000306796 2068 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
LSMEM1Q8N8F7 MID1IP1-201ENST00000336949 2536 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
LSMEM1Q8N8F7 RAP1GDS1-201ENST00000264572 1686 ntTSL 5 BASIC16.63■□□□□ 0.25
LSMEM1Q8N8F7 LHFPL6-201ENST00000379589 2110 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
LSMEM1Q8N8F7 SP100-208ENST00000427101 1922 ntTSL 2 BASIC16.63■□□□□ 0.25
LSMEM1Q8N8F7 PAK4-209ENST00000599470 1715 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
LSMEM1Q8N8F7 MPC2-201ENST00000271373 798 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
LSMEM1Q8N8F7 TSPAN14-202ENST00000341863 1037 ntTSL 5 BASIC16.63■□□□□ 0.25
LSMEM1Q8N8F7 HYAL3-203ENST00000415204 959 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
LSMEM1Q8N8F7 EHMT1-211ENST00000482340 691 ntTSL 5 BASIC16.63■□□□□ 0.25
LSMEM1Q8N8F7 AC104596.1-202ENST00000507486 759 ntTSL 3 BASIC16.63■□□□□ 0.25
LSMEM1Q8N8F7 PRTN3-202ENST00000544537 1036 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
LSMEM1Q8N8F7 MIR3917-201ENST00000580971 93 ntBASIC16.63■□□□□ 0.25
LSMEM1Q8N8F7 AC006942.1-201ENST00000600669 520 ntTSL 2 BASIC16.63■□□□□ 0.25
LSMEM1Q8N8F7 AC145285.6-201ENST00000604632 637 ntBASIC16.63■□□□□ 0.25
LSMEM1Q8N8F7 AC009542.2-201ENST00000637483 1189 ntTSL 5 BASIC16.63■□□□□ 0.25
LSMEM1Q8N8F7 AC066615.1-201ENST00000640911 628 ntBASIC16.63■□□□□ 0.25
LSMEM1Q8N8F7 AC092865.7-201ENST00000641832 219 ntBASIC16.63■□□□□ 0.25
LSMEM1Q8N8F7 RASL11B-201ENST00000248706 1995 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
LSMEM1Q8N8F7 IGSF9-206ENST00000611023 2663 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
LSMEM1Q8N8F7 FCGRT-201ENST00000221466 1798 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
LSMEM1Q8N8F7 DLK2-203ENST00000372488 1590 ntAPPRIS P3 TSL 1 (best) BASIC16.63■□□□□ 0.25
LSMEM1Q8N8F7 BIN1-208ENST00000376113 1832 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
LSMEM1Q8N8F7 RNPS1-205ENST00000561718 1806 ntTSL 3 BASIC16.63■□□□□ 0.25
LSMEM1Q8N8F7 C11orf24-201ENST00000304271 2063 ntAPPRIS P3 TSL 1 (best) BASIC16.63■□□□□ 0.25
LSMEM1Q8N8F7 SLC35G2-202ENST00000446465 2060 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
LSMEM1Q8N8F7 WNT9B-201ENST00000290015 1376 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
LSMEM1Q8N8F7 FO681492.1-203ENST00000622861 1362 ntAPPRIS ALT2 TSL 5 BASIC16.63■□□□□ 0.25
LSMEM1Q8N8F7 LRRC32-202ENST00000404995 2656 ntAPPRIS P1 TSL 5 BASIC16.63■□□□□ 0.25
LSMEM1Q8N8F7 KLHDC7B-201ENST00000395676 2991 ntAPPRIS P1 BASIC16.62■□□□□ 0.25
LSMEM1Q8N8F7 KLHDC4-227ENST00000622456 1422 ntTSL 5 BASIC16.62■□□□□ 0.25
LSMEM1Q8N8F7 MATN4-205ENST00000537548 1991 ntAPPRIS ALT2 TSL 5 BASIC16.62■□□□□ 0.25
LSMEM1Q8N8F7 UBQLN4-201ENST00000368309 3576 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
LSMEM1Q8N8F7 PSRC1-201ENST00000369903 1710 ntAPPRIS P3 TSL 5 BASIC16.62■□□□□ 0.25
LSMEM1Q8N8F7 PSRC1-206ENST00000409267 1730 ntAPPRIS P3 TSL 5 BASIC16.62■□□□□ 0.25
LSMEM1Q8N8F7 LGI4-202ENST00000392225 2891 ntTSL 5 BASIC16.62■□□□□ 0.25
LSMEM1Q8N8F7 BMP8B-201ENST00000372827 4822 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
LSMEM1Q8N8F7 CDX4-201ENST00000373514 1515 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
LSMEM1Q8N8F7 ALDH4A1-201ENST00000290597 2124 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
LSMEM1Q8N8F7 SNAPIN-201ENST00000368685 1030 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
LSMEM1Q8N8F7 TMEM53-201ENST00000372235 890 ntTSL 2 BASIC16.62■□□□□ 0.25
LSMEM1Q8N8F7 TMA16-209ENST00000513272 803 ntTSL 2 BASIC16.62■□□□□ 0.25
LSMEM1Q8N8F7 MTHFS-202ENST00000559722 948 ntTSL 2 BASIC16.62■□□□□ 0.25
LSMEM1Q8N8F7 CMTM3-210ENST00000565666 769 ntTSL 3 BASIC16.62■□□□□ 0.25
LSMEM1Q8N8F7 AC008687.5-201ENST00000593746 558 ntBASIC16.62■□□□□ 0.25
LSMEM1Q8N8F7 DPAGT1-203ENST00000409993 3274 ntAPPRIS P1 TSL 2 BASIC16.62■□□□□ 0.25
LSMEM1Q8N8F7 ZDHHC4-205ENST00000396713 1552 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
LSMEM1Q8N8F7 YPEL3-202ENST00000398841 1588 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
LSMEM1Q8N8F7 MID1IP1-202ENST00000378474 1889 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
LSMEM1Q8N8F7 SLC9A1-203ENST00000374086 2183 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
LSMEM1Q8N8F7 ZMYND11-208ENST00000397962 2150 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
LSMEM1Q8N8F7 AC006064.2-201ENST00000501075 2196 ntTSL 2 BASIC16.62■□□□□ 0.25
LSMEM1Q8N8F7 BTNL9-202ENST00000376841 1626 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
LSMEM1Q8N8F7 TP53BP2-201ENST00000343537 4651 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
LSMEM1Q8N8F7 HLA-DQB1-201ENST00000374943 1656 ntBASIC16.62■□□□□ 0.25
LSMEM1Q8N8F7 PRRT4-201ENST00000446477 3544 ntAPPRIS P1 TSL 5 BASIC16.62■□□□□ 0.25
LSMEM1Q8N8F7 AC067852.2-201ENST00000590513 2313 ntBASIC16.62■□□□□ 0.25
LSMEM1Q8N8F7 ACBD3-201ENST00000366812 3573 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
LSMEM1Q8N8F7 HNRNPK-202ENST00000360384 2038 ntAPPRIS ALT1 TSL 1 (best) BASIC16.62■□□□□ 0.25
LSMEM1Q8N8F7 MRI1-201ENST00000040663 1735 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
LSMEM1Q8N8F7 NPBWR1-201ENST00000331251 2687 ntAPPRIS P1 BASIC16.62■□□□□ 0.25
LSMEM1Q8N8F7 CDK11B-204ENST00000407249 2677 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
Retrieved 100 of 98,524 protein–RNA pairs in 37 ms