Protein–RNA interactions for Protein: Q8IWA6

CCDC60, Coiled-coil domain-containing protein 60, humanhuman

Predicted RBP Predictions only

Length 550 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC60Q8IWA6 TAPT1-201ENST00000405303 4591 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
CCDC60Q8IWA6 PPP2R2C-206ENST00000507294 1667 ntTSL 2 BASIC20.13■□□□□ 0.81
CCDC60Q8IWA6 ADGRB1-201ENST00000323289 5527 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
CCDC60Q8IWA6 AGAP5-203ENST00000581191 2779 ntAPPRIS ALT2 TSL 5 BASIC20.12■□□□□ 0.81
CCDC60Q8IWA6 TSEN34-202ENST00000396383 1548 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
CCDC60Q8IWA6 C11orf58-201ENST00000228136 2049 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
CCDC60Q8IWA6 PPA2-202ENST00000348706 1414 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
CCDC60Q8IWA6 SP100-208ENST00000427101 1922 ntTSL 2 BASIC20.12■□□□□ 0.81
CCDC60Q8IWA6 TMEM14A-201ENST00000211314 992 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
CCDC60Q8IWA6 AKR1C7P-201ENST00000305623 895 ntBASIC20.12■□□□□ 0.81
CCDC60Q8IWA6 CCS-201ENST00000310190 942 ntTSL 5 BASIC20.12■□□□□ 0.81
CCDC60Q8IWA6 TPM1-203ENST00000317516 738 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
CCDC60Q8IWA6 ID2-202ENST00000331129 623 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
CCDC60Q8IWA6 DFFB-203ENST00000341385 572 ntTSL 5 BASIC20.12■□□□□ 0.81
CCDC60Q8IWA6 CKLF-202ENST00000345436 571 ntAPPRIS ALT2 TSL 1 (best) BASIC20.12■□□□□ 0.81
CCDC60Q8IWA6 EDN3-203ENST00000371025 1153 ntAPPRIS ALT2 TSL 1 (best) BASIC20.12■□□□□ 0.81
CCDC60Q8IWA6 AC112698.1-201ENST00000510299 916 ntBASIC20.12■□□□□ 0.81
CCDC60Q8IWA6 AC139749.1-201ENST00000534584 1094 ntTSL 3 BASIC20.12■□□□□ 0.81
CCDC60Q8IWA6 TPM1-218ENST00000559281 851 ntTSL 5 BASIC20.12■□□□□ 0.81
CCDC60Q8IWA6 PLAUR-214ENST00000601723 1205 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
CCDC60Q8IWA6 AL138831.2-201ENST00000606564 490 ntBASIC20.12■□□□□ 0.81
CCDC60Q8IWA6 MCOLN2-201ENST00000284027 1729 ntAPPRIS P1 TSL 5 BASIC20.12■□□□□ 0.81
CCDC60Q8IWA6 PML-205ENST00000395132 1738 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
CCDC60Q8IWA6 DISC1-204ENST00000366633 2676 ntAPPRIS ALT2 TSL 1 (best) BASIC20.12■□□□□ 0.81
CCDC60Q8IWA6 DISC1-214ENST00000539444 2658 ntAPPRIS ALT2 TSL 1 (best) BASIC20.12■□□□□ 0.81
CCDC60Q8IWA6 CAMKK2-207ENST00000404169 2116 ntAPPRIS P4 TSL 1 (best) BASIC20.12■□□□□ 0.81
CCDC60Q8IWA6 IRF3-203ENST00000377139 1613 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
CCDC60Q8IWA6 FAM214B-203ENST00000378561 5771 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
CCDC60Q8IWA6 TRMT2A-201ENST00000252136 2964 ntAPPRIS P3 TSL 1 (best) BASIC20.12■□□□□ 0.81
CCDC60Q8IWA6 PIP4K2C-202ENST00000422156 1558 ntTSL 2 BASIC20.12■□□□□ 0.81
CCDC60Q8IWA6 ZDHHC5-201ENST00000287169 4666 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
CCDC60Q8IWA6 ZIC3-202ENST00000370606 1968 ntTSL 5 BASIC20.12■□□□□ 0.81
CCDC60Q8IWA6 STMN3-202ENST00000540534 2351 ntTSL 2 BASIC20.12■□□□□ 0.81
CCDC60Q8IWA6 ASIC3-202ENST00000349064 1895 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
CCDC60Q8IWA6 PLCXD1-202ENST00000381663 1863 ntAPPRIS P2 TSL 5 BASIC20.11■□□□□ 0.81
CCDC60Q8IWA6 AK1-203ENST00000373176 2266 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
CCDC60Q8IWA6 SMARCC2-203ENST00000394023 4271 ntAPPRIS ALT2 TSL 1 (best) BASIC20.11■□□□□ 0.81
CCDC60Q8IWA6 KIF25-AS1-201ENST00000414364 1420 ntTSL 2 BASIC20.11■□□□□ 0.81
CCDC60Q8IWA6 FDXR-202ENST00000413947 1809 ntTSL 2 BASIC20.11■□□□□ 0.81
CCDC60Q8IWA6 CABP1-201ENST00000288616 1369 ntAPPRIS P4 TSL 1 (best) BASIC20.11■□□□□ 0.81
CCDC60Q8IWA6 BAIAP2-204ENST00000428708 2095 ntAPPRIS ALT2 TSL 1 (best) BASIC20.11■□□□□ 0.81
CCDC60Q8IWA6 HCLS1-201ENST00000314583 2000 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
CCDC60Q8IWA6 CHCHD1-201ENST00000372833 835 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
CCDC60Q8IWA6 POM121L3P-201ENST00000419331 1163 ntBASIC20.11■□□□□ 0.81
CCDC60Q8IWA6 MEG3-211ENST00000452514 461 ntTSL 3 BASIC20.11■□□□□ 0.81
CCDC60Q8IWA6 KRT16P4-201ENST00000453883 522 ntBASIC20.11■□□□□ 0.81
CCDC60Q8IWA6 AL611929.1-201ENST00000457340 449 ntTSL 3 BASIC20.11■□□□□ 0.81
CCDC60Q8IWA6 HOXB-AS2-201ENST00000464382 845 ntTSL 4 BASIC20.11■□□□□ 0.81
CCDC60Q8IWA6 RNASEH2C-202ENST00000527610 835 ntTSL 2 BASIC20.11■□□□□ 0.81
CCDC60Q8IWA6 AC013356.2-201ENST00000559730 729 ntTSL 3 BASIC20.11■□□□□ 0.81
CCDC60Q8IWA6 TRAF7-205ENST00000567653 666 ntTSL 2 BASIC20.11■□□□□ 0.81
CCDC60Q8IWA6 AC114341.1-201ENST00000618070 349 ntBASIC20.11■□□□□ 0.81
CCDC60Q8IWA6 ACP5-201ENST00000218758 1630 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
CCDC60Q8IWA6 AL079301.1-201ENST00000424580 1633 ntTSL 2 BASIC20.11■□□□□ 0.81
CCDC60Q8IWA6 ALKBH5-203ENST00000541285 1605 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
CCDC60Q8IWA6 SEMA3B-210ENST00000611067 2292 ntAPPRIS ALT2 TSL 1 (best) BASIC20.11■□□□□ 0.81
CCDC60Q8IWA6 PCBP3-206ENST00000400314 2202 ntAPPRIS P2 TSL 5 BASIC20.11■□□□□ 0.81
CCDC60Q8IWA6 C2CD2-202ENST00000380486 6345 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
CCDC60Q8IWA6 MID2-201ENST00000262843 2876 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
CCDC60Q8IWA6 ADAMTS9-202ENST00000459780 2871 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
CCDC60Q8IWA6 DGKI-202ENST00000424189 4163 ntAPPRIS ALT2 TSL 5 BASIC20.11■□□□□ 0.81
CCDC60Q8IWA6 CHRAC1-201ENST00000220913 2488 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
CCDC60Q8IWA6 YAP1-208ENST00000531439 1490 ntAPPRIS ALT2 TSL 1 (best) BASIC20.11■□□□□ 0.81
CCDC60Q8IWA6 DHRS4L2-203ENST00000534993 1450 ntTSL 3 BASIC20.11■□□□□ 0.81
CCDC60Q8IWA6 SCRN2-202ENST00000407215 1779 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
CCDC60Q8IWA6 TNFRSF8-202ENST00000413146 2363 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
CCDC60Q8IWA6 TPGS2-219ENST00000593035 1727 ntAPPRIS ALT2 TSL 2 BASIC20.1■□□□□ 0.81
CCDC60Q8IWA6 GOLGA6L10-207ENST00000610657 1705 ntAPPRIS P2 TSL 2 BASIC20.1■□□□□ 0.81
CCDC60Q8IWA6 A4GALT-201ENST00000249005 2020 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
CCDC60Q8IWA6 NDRG2-208ENST00000397851 2022 ntAPPRIS P4 TSL 2 BASIC20.1■□□□□ 0.81
CCDC60Q8IWA6 COPS7A-204ENST00000534947 2034 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
CCDC60Q8IWA6 ESYT3-201ENST00000289135 1356 ntTSL 5 BASIC20.1■□□□□ 0.81
CCDC60Q8IWA6 RGS20-203ENST00000344277 1667 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
CCDC60Q8IWA6 UBTF-202ENST00000343638 4684 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
CCDC60Q8IWA6 KRT81-201ENST00000327741 1929 ntAPPRIS P2 TSL 1 (best) BASIC20.1■□□□□ 0.81
CCDC60Q8IWA6 FAM50B-202ENST00000380274 1932 ntAPPRIS P1 BASIC20.1■□□□□ 0.81
CCDC60Q8IWA6 CDK13-202ENST00000340829 5066 ntAPPRIS ALT1 TSL 1 (best) BASIC20.1■□□□□ 0.81
CCDC60Q8IWA6 AC093677.2-201ENST00000600169 1863 ntBASIC20.1■□□□□ 0.81
CCDC60Q8IWA6 SSSCA1-201ENST00000309328 698 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
CCDC60Q8IWA6 CD1E-203ENST00000368156 861 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
CCDC60Q8IWA6 KCNAB2-205ENST00000378092 1202 ntAPPRIS ALT1 TSL 5 BASIC20.1■□□□□ 0.81
CCDC60Q8IWA6 IGF2-202ENST00000381392 1005 ntAPPRIS ALT1 TSL 1 (best) BASIC20.1■□□□□ 0.81
CCDC60Q8IWA6 CLDN7-202ENST00000397317 1228 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
CCDC60Q8IWA6 CYCS-202ENST00000409409 974 ntAPPRIS P1 TSL 3 BASIC20.1■□□□□ 0.81
CCDC60Q8IWA6 EEF1E1-202ENST00000429723 562 ntTSL 3 BASIC20.1■□□□□ 0.81
CCDC60Q8IWA6 FAM41C-202ENST00000432963 504 ntTSL 2 BASIC20.1■□□□□ 0.81
CCDC60Q8IWA6 AL591212.1-201ENST00000433646 615 ntTSL 5 BASIC20.1■□□□□ 0.81
CCDC60Q8IWA6 UBXN10-AS1-201ENST00000442226 510 ntTSL 2 BASIC20.1■□□□□ 0.81
CCDC60Q8IWA6 FAAHP1-202ENST00000446499 1238 ntBASIC20.1■□□□□ 0.81
CCDC60Q8IWA6 AC079781.3-201ENST00000449110 356 ntBASIC20.1■□□□□ 0.81
CCDC60Q8IWA6 AC136604.3-201ENST00000508188 429 ntTSL 3 BASIC20.1■□□□□ 0.81
CCDC60Q8IWA6 AC008735.1-201ENST00000592252 802 ntTSL 5 BASIC20.1■□□□□ 0.81
CCDC60Q8IWA6 AL031008.1-201ENST00000619963 541 ntBASIC20.1■□□□□ 0.81
CCDC60Q8IWA6 MAP2K3-215ENST00000627447 351 ntTSL 5 BASIC20.1■□□□□ 0.81
CCDC60Q8IWA6 PTENP1-AS-201ENST00000627688 873 ntTSL 5 BASIC20.1■□□□□ 0.81
CCDC60Q8IWA6 SEPT8-216ENST00000620483 4335 ntTSL 5 BASIC20.1■□□□□ 0.81
CCDC60Q8IWA6 ZMAT3-203ENST00000432729 2944 ntAPPRIS ALT1 TSL 2 BASIC20.1■□□□□ 0.81
CCDC60Q8IWA6 GMPR-201ENST00000259727 1515 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
CCDC60Q8IWA6 FAM189B-204ENST00000368368 2609 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
CCDC60Q8IWA6 NDOR1-203ENST00000427047 2315 ntTSL 2 BASIC20.1■□□□□ 0.81
Retrieved 100 of 98,524 protein–RNA pairs in 23 ms