Protein–RNA interactions for Protein: Q8IV32

CCDC71, Coiled-coil domain-containing protein 71, humanhuman

Predicted RBP Predictions only

Length 467 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC71Q8IV32 KRTCAP3-207ENST00000543753 956 ntAPPRIS P1 TSL 5 BASIC17.03■□□□□ 0.32
CCDC71Q8IV32 METTL23-204ENST00000586752 904 ntTSL 2 BASIC17.03■□□□□ 0.32
CCDC71Q8IV32 RPARP-AS1-206ENST00000596366 631 ntTSL 3 BASIC17.03■□□□□ 0.32
CCDC71Q8IV32 AC243829.1-201ENST00000615128 1059 ntTSL 2 BASIC17.03■□□□□ 0.32
CCDC71Q8IV32 AC009477.2-201ENST00000635976 171 ntAPPRIS P1 BASIC17.03■□□□□ 0.32
CCDC71Q8IV32 ARFGAP2-229ENST00000627920 2613 ntTSL 2 BASIC17.03■□□□□ 0.32
CCDC71Q8IV32 RPRM-201ENST00000325926 1471 ntAPPRIS P1 BASIC17.03■□□□□ 0.32
CCDC71Q8IV32 HSPB6-201ENST00000004982 1457 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
CCDC71Q8IV32 PFDN6-206ENST00000463584 1915 ntTSL 3 BASIC17.03■□□□□ 0.32
CCDC71Q8IV32 SEPHS1-202ENST00000378614 2387 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
CCDC71Q8IV32 PLD3-207ENST00000409735 2140 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
CCDC71Q8IV32 FAM131A-204ENST00000418281 1664 ntTSL 5 BASIC17.03■□□□□ 0.32
CCDC71Q8IV32 RAI2-201ENST00000331511 2317 ntAPPRIS P1 TSL 2 BASIC17.03■□□□□ 0.32
CCDC71Q8IV32 PCCB-208ENST00000468777 1877 ntAPPRIS ALT2 TSL 3 BASIC17.03■□□□□ 0.32
CCDC71Q8IV32 INPP5J-207ENST00000405300 2515 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
CCDC71Q8IV32 NUBP2-201ENST00000262302 1413 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
CCDC71Q8IV32 THOC3-212ENST00000628318 1442 ntTSL 5 BASIC17.03■□□□□ 0.32
CCDC71Q8IV32 RNPS1-203ENST00000397086 2069 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
CCDC71Q8IV32 ACSS2-201ENST00000253382 2925 ntTSL 2 BASIC17.03■□□□□ 0.32
CCDC71Q8IV32 TM2D2-201ENST00000397070 1631 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
CCDC71Q8IV32 AL365232.1-201ENST00000423730 1636 ntAPPRIS P1 TSL 5 BASIC17.03■□□□□ 0.32
CCDC71Q8IV32 APBB1-210ENST00000530885 1626 ntTSL 2 BASIC17.03■□□□□ 0.32
CCDC71Q8IV32 LSR-212ENST00000602122 2480 ntAPPRIS ALT2 TSL 2 BASIC17.03■□□□□ 0.32
CCDC71Q8IV32 OSBPL1A-204ENST00000399443 3317 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
CCDC71Q8IV32 PRMT1-201ENST00000391851 1393 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
CCDC71Q8IV32 NOL3-211ENST00000568146 1351 ntAPPRIS ALT2 TSL 1 (best) BASIC17.02■□□□□ 0.32
CCDC71Q8IV32 ARHGAP27-214ENST00000532891 2604 ntAPPRIS ALT2 TSL 5 BASIC17.02■□□□□ 0.32
CCDC71Q8IV32 CTSB-232ENST00000534510 1989 ntAPPRIS P1 TSL 5 BASIC17.02■□□□□ 0.32
CCDC71Q8IV32 CLN3-204ENST00000357857 1720 ntTSL 2 BASIC17.02■□□□□ 0.32
CCDC71Q8IV32 PRRT1-201ENST00000211413 1909 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
CCDC71Q8IV32 AP2M1-201ENST00000292807 1931 ntAPPRIS P4 TSL 5 BASIC17.02■□□□□ 0.32
CCDC71Q8IV32 ALAS2-203ENST00000396198 1936 ntTSL 5 BASIC17.02■□□□□ 0.32
CCDC71Q8IV32 LHFPL6-201ENST00000379589 2110 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
CCDC71Q8IV32 CYP2W1-201ENST00000308919 2304 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
CCDC71Q8IV32 CD24-204ENST00000619133 2513 ntAPPRIS P3 TSL 2 BASIC17.02■□□□□ 0.32
CCDC71Q8IV32 BFSP1-205ENST00000536626 2075 ntTSL 2 BASIC17.02■□□□□ 0.32
CCDC71Q8IV32 POR-209ENST00000439269 1858 ntTSL 2 BASIC17.02■□□□□ 0.32
CCDC71Q8IV32 OGFOD3-202ENST00000329197 1652 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
CCDC71Q8IV32 AGTRAP-201ENST00000314340 1107 ntAPPRIS P3 TSL 1 (best) BASIC17.02■□□□□ 0.32
CCDC71Q8IV32 NPM3-201ENST00000370110 877 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
CCDC71Q8IV32 C16orf91-201ENST00000442039 978 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
CCDC71Q8IV32 AL359075.1-203ENST00000462729 1002 ntBASIC17.02■□□□□ 0.32
CCDC71Q8IV32 SURF4-206ENST00000485435 1206 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
CCDC71Q8IV32 CCNG1-211ENST00000512163 919 ntTSL 2 BASIC17.02■□□□□ 0.32
CCDC71Q8IV32 CD320-202ENST00000537716 1119 ntTSL 2 BASIC17.02■□□□□ 0.32
CCDC71Q8IV32 TESMIN-209ENST00000544963 1235 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
CCDC71Q8IV32 AC005606.2-201ENST00000564438 614 ntTSL 2 BASIC17.02■□□□□ 0.32
CCDC71Q8IV32 AL512604.3-201ENST00000569583 964 ntBASIC17.02■□□□□ 0.32
CCDC71Q8IV32 SPINK2-207ENST00000631082 392 ntTSL 5 BASIC17.02■□□□□ 0.32
CCDC71Q8IV32 HDAC10-222ENST00000626012 2607 ntTSL 5 BASIC17.02■□□□□ 0.32
CCDC71Q8IV32 MCUR1-201ENST00000379170 5471 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
CCDC71Q8IV32 OSTM1-201ENST00000193322 4467 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
CCDC71Q8IV32 GMDS-208ENST00000530927 1440 ntAPPRIS ALT2 TSL 1 (best) BASIC17.02■□□□□ 0.31
CCDC71Q8IV32 MACROD2-201ENST00000217246 4994 ntAPPRIS P1 TSL 2 BASIC17.02■□□□□ 0.31
CCDC71Q8IV32 HOOK2-202ENST00000397668 2513 ntTSL 1 (best) BASIC17.02■□□□□ 0.31
CCDC71Q8IV32 QKI-205ENST00000392127 7911 ntTSL 1 (best) BASIC17.02■□□□□ 0.31
CCDC71Q8IV32 REXO1L9P-201ENST00000604264 2108 ntBASIC17.02■□□□□ 0.31
CCDC71Q8IV32 MEPCE-201ENST00000310512 3030 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
CCDC71Q8IV32 PLCL2-204ENST00000615277 4147 ntAPPRIS ALT2 TSL 1 (best) BASIC17.02■□□□□ 0.31
CCDC71Q8IV32 AC133785.1-201ENST00000429282 2824 ntTSL 2 BASIC17.02■□□□□ 0.31
CCDC71Q8IV32 CAMK2B-204ENST00000350811 2292 ntAPPRIS P4 TSL 2 BASIC17.01■□□□□ 0.31
CCDC71Q8IV32 AC012317.2-201ENST00000623305 2251 ntBASIC17.01■□□□□ 0.31
CCDC71Q8IV32 C22orf39-205ENST00000542103 1523 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
CCDC71Q8IV32 NADSYN1-201ENST00000319023 2773 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
CCDC71Q8IV32 TMEM45B-201ENST00000281441 2234 ntAPPRIS P1 TSL 2 BASIC17.01■□□□□ 0.31
CCDC71Q8IV32 MIB2-201ENST00000355826 3290 ntAPPRIS ALT2 TSL 1 (best) BASIC17.01■□□□□ 0.31
CCDC71Q8IV32 ANKRD29-201ENST00000322980 1658 ntTSL 2 BASIC17.01■□□□□ 0.31
CCDC71Q8IV32 RGS20-203ENST00000344277 1667 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
CCDC71Q8IV32 CADPS2-208ENST00000615869 6066 ntAPPRIS ALT1 TSL 5 BASIC17.01■□□□□ 0.31
CCDC71Q8IV32 SLC12A4-201ENST00000316341 4765 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
CCDC71Q8IV32 COQ9-210ENST00000567072 1482 ntTSL 3 BASIC17.01■□□□□ 0.31
CCDC71Q8IV32 UBE3C-201ENST00000348165 5229 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
CCDC71Q8IV32 GRAMD1B-214ENST00000635736 2814 ntAPPRIS P1 TSL 5 BASIC17.01■□□□□ 0.31
CCDC71Q8IV32 DDRGK1-202ENST00000380201 1128 ntTSL 2 BASIC17.01■□□□□ 0.31
CCDC71Q8IV32 AC012618.3-203ENST00000426044 917 ntTSL 2 BASIC17.01■□□□□ 0.31
CCDC71Q8IV32 CA15P1-201ENST00000481698 905 ntBASIC17.01■□□□□ 0.31
CCDC71Q8IV32 LCN10-205ENST00000497771 723 ntAPPRIS P2 TSL 1 (best) BASIC17.01■□□□□ 0.31
CCDC71Q8IV32 AZIN1-AS1-214ENST00000522850 473 ntTSL 3 BASIC17.01■□□□□ 0.31
CCDC71Q8IV32 RAB6A-207ENST00000541588 758 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
CCDC71Q8IV32 AL441883.1-201ENST00000566170 1045 ntBASIC17.01■□□□□ 0.31
CCDC71Q8IV32 METRN-205ENST00000568415 612 ntAPPRIS ALT2 TSL 3 BASIC17.01■□□□□ 0.31
CCDC71Q8IV32 AC005625.1-201ENST00000590304 472 ntTSL 3 BASIC17.01■□□□□ 0.31
CCDC71Q8IV32 FFAR2-202ENST00000599180 2133 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
CCDC71Q8IV32 OBP2B-205ENST00000618116 961 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
CCDC71Q8IV32 AC027682.6-202ENST00000621378 795 ntTSL 2 BASIC17.01■□□□□ 0.31
CCDC71Q8IV32 AL513523.10-201ENST00000623024 1186 ntAPPRIS P1 TSL 5 BASIC17.01■□□□□ 0.31
CCDC71Q8IV32 SPAG6-203ENST00000376624 2605 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
CCDC71Q8IV32 MOCS2-202ENST00000396954 1785 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
CCDC71Q8IV32 SELENOF-207ENST00000611507 1785 ntTSL 5 BASIC17.01■□□□□ 0.31
CCDC71Q8IV32 POLR1D-221ENST00000637180 2262 ntTSL 5 BASIC17.01■□□□□ 0.31
CCDC71Q8IV32 TRAM1-201ENST00000262213 2785 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
CCDC71Q8IV32 JMJD4-207ENST00000620518 2432 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
CCDC71Q8IV32 TULP1-208ENST00000614066 2084 ntAPPRIS ALT2 TSL 5 BASIC17.01■□□□□ 0.31
CCDC71Q8IV32 AVPR1B-201ENST00000367126 2237 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
CCDC71Q8IV32 TPRA1-204ENST00000450633 1865 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
CCDC71Q8IV32 SAAL1-201ENST00000300013 1518 ntAPPRIS ALT1 TSL 2 BASIC17.01■□□□□ 0.31
CCDC71Q8IV32 PLAUR-203ENST00000340093 1548 ntAPPRIS P3 TSL 1 (best) BASIC17.01■□□□□ 0.31
CCDC71Q8IV32 PHB2-203ENST00000535923 1515 ntAPPRIS P2 TSL 5 BASIC17.01■□□□□ 0.31
CCDC71Q8IV32 CCDC144A-210ENST00000456009 2306 ntTSL 5 BASIC17.01■□□□□ 0.31
CCDC71Q8IV32 PDE2A-226ENST00000544570 3119 ntTSL 5 BASIC17.01■□□□□ 0.31
Retrieved 100 of 98,524 protein–RNA pairs in 23.5 ms