Protein–RNA interactions for Protein: Q86VH4

LRRTM4, Leucine-rich repeat transmembrane neuronal protein 4, humanhuman

Predictions only

Length 590 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRRTM4Q86VH4 GBGT1-208ENST00000540636 1934 ntTSL 2 BASIC17.78■□□□□ 0.44
LRRTM4Q86VH4 ZNF707-202ENST00000418203 2661 ntAPPRIS P1 TSL 5 BASIC17.78■□□□□ 0.44
LRRTM4Q86VH4 TTLL10-203ENST00000379290 2283 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
LRRTM4Q86VH4 C1QTNF1-201ENST00000311661 2624 ntTSL 2 BASIC17.78■□□□□ 0.44
LRRTM4Q86VH4 ATP1B1-201ENST00000367815 1883 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
LRRTM4Q86VH4 NOP56-201ENST00000329276 2400 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
LRRTM4Q86VH4 PTTG1IP-203ENST00000397887 2413 ntTSL 4 BASIC17.78■□□□□ 0.44
LRRTM4Q86VH4 SMARCD3-202ENST00000356800 1669 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
LRRTM4Q86VH4 ZNF74-203ENST00000403682 2789 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
LRRTM4Q86VH4 PPIH-202ENST00000372549 327 ntTSL 3 BASIC17.78■□□□□ 0.44
LRRTM4Q86VH4 AC131097.3-201ENST00000413820 1228 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
LRRTM4Q86VH4 UBE2E1-AS1-201ENST00000426702 778 ntTSL 3 BASIC17.78■□□□□ 0.44
LRRTM4Q86VH4 KRT18P65-201ENST00000439811 1286 ntBASIC17.78■□□□□ 0.44
LRRTM4Q86VH4 LINC00265-3P-201ENST00000447588 903 ntBASIC17.78■□□□□ 0.44
LRRTM4Q86VH4 RBM14-RBM4-203ENST00000500635 829 ntTSL 2 BASIC17.78■□□□□ 0.44
LRRTM4Q86VH4 KRT18P56-201ENST00000507275 550 ntBASIC17.78■□□□□ 0.44
LRRTM4Q86VH4 PHB2-207ENST00000542912 1138 ntTSL 5 BASIC17.78■□□□□ 0.44
LRRTM4Q86VH4 C1QTNF1-205ENST00000578229 1294 ntTSL 4 BASIC17.78■□□□□ 0.44
LRRTM4Q86VH4 AC104971.2-201ENST00000588144 1209 ntTSL 2 BASIC17.78■□□□□ 0.44
LRRTM4Q86VH4 ZNF549-203ENST00000594943 556 ntTSL 4 BASIC17.78■□□□□ 0.44
LRRTM4Q86VH4 CABP7-201ENST00000216144 3259 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
LRRTM4Q86VH4 FBXO41-204ENST00000520530 3293 ntAPPRIS P1 TSL 5 BASIC17.78■□□□□ 0.44
LRRTM4Q86VH4 COL18A1-204ENST00000400337 5436 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
LRRTM4Q86VH4 AC093010.1-201ENST00000473625 1624 ntBASIC17.78■□□□□ 0.44
LRRTM4Q86VH4 KLHL40-201ENST00000287777 2517 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
LRRTM4Q86VH4 DKK1-201ENST00000373970 1790 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
LRRTM4Q86VH4 FAM206A-201ENST00000322940 2134 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
LRRTM4Q86VH4 FOXP1-214ENST00000493089 2703 ntAPPRIS ALT1 TSL 2 BASIC17.78■□□□□ 0.44
LRRTM4Q86VH4 SULF2-201ENST00000359930 4915 ntAPPRIS P4 TSL 1 (best) BASIC17.77■□□□□ 0.44
LRRTM4Q86VH4 NEUROD2-201ENST00000302584 2041 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
LRRTM4Q86VH4 HNRNPM-201ENST00000325495 2494 ntAPPRIS P4 TSL 1 (best) BASIC17.77■□□□□ 0.44
LRRTM4Q86VH4 TIMM13-201ENST00000215570 1973 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
LRRTM4Q86VH4 AP5S1-201ENST00000246041 1960 ntAPPRIS P1 TSL 4 BASIC17.77■□□□□ 0.44
LRRTM4Q86VH4 PITPNC1-201ENST00000299954 6359 ntAPPRIS ALT2 TSL 5 BASIC17.77■□□□□ 0.44
LRRTM4Q86VH4 APBB1-215ENST00000608394 2128 ntTSL 5 BASIC17.77■□□□□ 0.44
LRRTM4Q86VH4 APBB1-222ENST00000610474 2147 ntTSL 5 BASIC17.77■□□□□ 0.44
LRRTM4Q86VH4 IFIH1-202ENST00000421365 1617 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
LRRTM4Q86VH4 ANKS3-202ENST00000446014 2265 ntTSL 5 BASIC17.77■□□□□ 0.44
LRRTM4Q86VH4 NUMBL-202ENST00000540131 1931 ntAPPRIS ALT2 TSL 2 BASIC17.77■□□□□ 0.44
LRRTM4Q86VH4 CGB7-201ENST00000377280 918 ntAPPRIS P1 TSL 3 BASIC17.77■□□□□ 0.44
LRRTM4Q86VH4 FAM239B-201ENST00000381106 1099 ntTSL 2 BASIC17.77■□□□□ 0.44
LRRTM4Q86VH4 CXCL12-204ENST00000395793 665 ntTSL 5 BASIC17.77■□□□□ 0.44
LRRTM4Q86VH4 LENG8-AS1-201ENST00000416022 582 ntTSL 3 BASIC17.77■□□□□ 0.44
LRRTM4Q86VH4 ENO1-AS1-201ENST00000442636 456 ntTSL 2 BASIC17.77■□□□□ 0.44
LRRTM4Q86VH4 IMMP2L-207ENST00000452895 833 ntAPPRIS P1 TSL 5 BASIC17.77■□□□□ 0.44
LRRTM4Q86VH4 TOB2P1-201ENST00000469761 992 ntBASIC17.77■□□□□ 0.44
LRRTM4Q86VH4 VENTXP7-201ENST00000475503 772 ntBASIC17.77■□□□□ 0.44
LRRTM4Q86VH4 AC106791.1-202ENST00000508281 1148 ntTSL 2 BASIC17.77■□□□□ 0.44
LRRTM4Q86VH4 COX6C-204ENST00000520271 571 ntAPPRIS P1 TSL 2 BASIC17.77■□□□□ 0.44
LRRTM4Q86VH4 AP1S2-206ENST00000545766 576 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
LRRTM4Q86VH4 BRICD5-203ENST00000566018 555 ntTSL 2 BASIC17.77■□□□□ 0.44
LRRTM4Q86VH4 LAT-211ENST00000566177 786 ntAPPRIS ALT2 TSL 1 (best) BASIC17.77■□□□□ 0.44
LRRTM4Q86VH4 TMIGD2-202ENST00000595645 1212 ntAPPRIS ALT2 TSL 1 (best) BASIC17.77■□□□□ 0.44
LRRTM4Q86VH4 IGFBP4-201ENST00000269593 2200 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
LRRTM4Q86VH4 TMEM198-202ENST00000373883 2218 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
LRRTM4Q86VH4 SIM2-201ENST00000290399 4442 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
LRRTM4Q86VH4 SNX4-201ENST00000251775 2513 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
LRRTM4Q86VH4 PSMD8-207ENST00000592035 1581 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
LRRTM4Q86VH4 WWOX-203ENST00000406884 1701 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
LRRTM4Q86VH4 ARSE-201ENST00000381134 1853 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
LRRTM4Q86VH4 AC093677.2-201ENST00000600169 1863 ntBASIC17.77■□□□□ 0.43
LRRTM4Q86VH4 CYTH1-209ENST00000589296 2159 ntTSL 5 BASIC17.77■□□□□ 0.43
LRRTM4Q86VH4 FBXL20-202ENST00000394294 2309 ntTSL 1 (best) BASIC17.77■□□□□ 0.43
LRRTM4Q86VH4 SLC22A17-204ENST00000397267 2455 ntAPPRIS P4 TSL 5 BASIC17.77■□□□□ 0.43
LRRTM4Q86VH4 DIP2A-203ENST00000435722 2760 ntTSL 2 BASIC17.77■□□□□ 0.43
LRRTM4Q86VH4 AMIGO1-202ENST00000369864 5088 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
LRRTM4Q86VH4 KLHDC10-201ENST00000335420 6437 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
LRRTM4Q86VH4 UPP1-203ENST00000395564 1375 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
LRRTM4Q86VH4 IMPAD1-201ENST00000262644 7199 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
LRRTM4Q86VH4 USP32-201ENST00000300896 5171 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
LRRTM4Q86VH4 LDHD-202ENST00000450168 1966 ntAPPRIS ALT2 TSL 1 (best) BASIC17.77■□□□□ 0.43
LRRTM4Q86VH4 UAP1-204ENST00000367926 2294 ntAPPRIS P3 TSL 1 (best) BASIC17.77■□□□□ 0.43
LRRTM4Q86VH4 FAM91A1-201ENST00000334705 5511 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
LRRTM4Q86VH4 CARHSP1-219ENST00000618335 2972 ntAPPRIS P1 TSL 4 BASIC17.76■□□□□ 0.43
LRRTM4Q86VH4 SNAP47-201ENST00000315781 2367 ntAPPRIS P3 TSL 1 (best) BASIC17.76■□□□□ 0.43
LRRTM4Q86VH4 AHRR-204ENST00000506456 2350 ntTSL 2 BASIC17.76■□□□□ 0.43
LRRTM4Q86VH4 TBC1D3I-202ENST00000618620 1900 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
LRRTM4Q86VH4 FGFR3-205ENST00000440486 4287 ntAPPRIS P3 TSL 5 BASIC17.76■□□□□ 0.43
LRRTM4Q86VH4 SRSF1-208ENST00000584773 1317 ntTSL 5 BASIC17.76■□□□□ 0.43
LRRTM4Q86VH4 CDCA7L-203ENST00000406877 3066 ntAPPRIS P3 TSL 1 (best) BASIC17.76■□□□□ 0.43
LRRTM4Q86VH4 WT1-205ENST00000452863 2768 ntAPPRIS ALT2 TSL 1 (best) BASIC17.76■□□□□ 0.43
LRRTM4Q86VH4 CDK11A-205ENST00000378633 2458 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
LRRTM4Q86VH4 GNAS-AS1-202ENST00000443966 2341 ntTSL 5 BASIC17.76■□□□□ 0.43
LRRTM4Q86VH4 KCNN4-209ENST00000615047 2029 ntTSL 5 BASIC17.76■□□□□ 0.43
LRRTM4Q86VH4 POMT2-201ENST00000261534 4876 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
LRRTM4Q86VH4 LINC01700-201ENST00000433952 1598 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
LRRTM4Q86VH4 CST3-202ENST00000398409 832 ntAPPRIS P1 TSL 3 BASIC17.76■□□□□ 0.43
LRRTM4Q86VH4 NDUFB9-202ENST00000517367 636 ntTSL 3 BASIC17.76■□□□□ 0.43
LRRTM4Q86VH4 COPS7A-215ENST00000543155 2127 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
LRRTM4Q86VH4 VASH1-204ENST00000554743 1096 ntTSL 3 BASIC17.76■□□□□ 0.43
LRRTM4Q86VH4 MPI-205ENST00000562606 1052 ntTSL 3 BASIC17.76■□□□□ 0.43
LRRTM4Q86VH4 ANAPC11-204ENST00000571024 668 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
LRRTM4Q86VH4 AC011840.4-201ENST00000578471 627 ntBASIC17.76■□□□□ 0.43
LRRTM4Q86VH4 ANAPC11-218ENST00000582222 523 ntTSL 2 BASIC17.76■□□□□ 0.43
LRRTM4Q86VH4 ZNF524-203ENST00000591046 1260 ntAPPRIS P1 BASIC17.76■□□□□ 0.43
LRRTM4Q86VH4 H2BFWT-202ENST00000611083 528 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
LRRTM4Q86VH4 DHRS4L2-211ENST00000621761 1049 ntTSL 5 BASIC17.76■□□□□ 0.43
LRRTM4Q86VH4 CPXM2-204ENST00000615851 2512 ntTSL 5 BASIC17.76■□□□□ 0.43
LRRTM4Q86VH4 TSEN34-202ENST00000396383 1548 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
LRRTM4Q86VH4 CCDC43-201ENST00000315286 2082 ntAPPRIS P2 TSL 1 (best) BASIC17.76■□□□□ 0.43
Retrieved 100 of 98,524 protein–RNA pairs in 27.3 ms