Protein–RNA interactions for Protein: Q70EL3

USP50, Inactive ubiquitin carboxyl-terminal hydrolase 50, humanhuman

Predicted RBP Predictions only

Length 339 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP50Q70EL3 RUSC1-214ENST00000490373 1700 ntTSL 1 (best) BASIC21.31■■□□□ 1
USP50Q70EL3 GLIPR2-203ENST00000396613 1917 ntTSL 4 BASIC21.31■■□□□ 1
USP50Q70EL3 IFRD2-202ENST00000417626 2109 ntTSL 1 (best) BASIC21.31■■□□□ 1
USP50Q70EL3 OARD1-202ENST00000424266 1337 ntAPPRIS P1 TSL 2 BASIC21.3■■□□□ 1
USP50Q70EL3 SEC61A2-201ENST00000298428 1893 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
USP50Q70EL3 AC010619.2-201ENST00000595815 1421 ntTSL 2 BASIC21.3■■□□□ 1
USP50Q70EL3 PARD3-210ENST00000374794 5669 ntAPPRIS ALT2 TSL 1 (best) BASIC21.3■■□□□ 1
USP50Q70EL3 KIF25-202ENST00000354419 1510 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
USP50Q70EL3 UBE2G1-204ENST00000572484 1514 ntTSL 5 BASIC21.3■■□□□ 1
USP50Q70EL3 PRICKLE4-204ENST00000458694 1646 ntAPPRIS P2 TSL 5 BASIC21.3■■□□□ 1
USP50Q70EL3 SLC25A47-201ENST00000361529 1738 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
USP50Q70EL3 LPAR3-201ENST00000370611 1720 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
USP50Q70EL3 UBE2Z-201ENST00000360943 3122 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
USP50Q70EL3 DTNB-201ENST00000288642 2464 ntAPPRIS ALT2 TSL 2 BASIC21.3■■□□□ 1
USP50Q70EL3 DTNB-208ENST00000406818 2474 ntAPPRIS P4 TSL 1 (best) BASIC21.3■■□□□ 1
USP50Q70EL3 UBXN1-201ENST00000294119 1291 ntTSL 1 (best) BASIC21.3■■□□□ 1
USP50Q70EL3 AL139400.1-201ENST00000366220 510 ntBASIC21.3■■□□□ 1
USP50Q70EL3 GUK1-210ENST00000391865 990 ntAPPRIS ALT1 TSL 1 (best) BASIC21.3■■□□□ 1
USP50Q70EL3 LINC00029-202ENST00000414668 1117 ntTSL 1 (best) BASIC21.3■■□□□ 1
USP50Q70EL3 NKIRAS1-204ENST00000416026 795 ntAPPRIS P2 TSL 3 BASIC21.3■■□□□ 1
USP50Q70EL3 AC096633.1-201ENST00000422446 749 ntBASIC21.3■■□□□ 1
USP50Q70EL3 ACTG1P14-201ENST00000446382 1122 ntBASIC21.3■■□□□ 1
USP50Q70EL3 TMEM263-206ENST00000550344 925 ntAPPRIS P1 TSL 2 BASIC21.3■■□□□ 1
USP50Q70EL3 PDPK2P-202ENST00000562415 1191 ntBASIC21.3■■□□□ 1
USP50Q70EL3 LCE1E-203ENST00000619588 267 ntAPPRIS ALT2 TSL 5 BASIC21.3■■□□□ 1
USP50Q70EL3 C2orf81-201ENST00000290390 2227 ntAPPRIS P5 TSL 5 BASIC21.3■■□□□ 1
USP50Q70EL3 NHLRC1-201ENST00000340650 2248 ntAPPRIS P1 BASIC21.3■■□□□ 1
USP50Q70EL3 TRIM61-201ENST00000329314 1582 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
USP50Q70EL3 AC138969.1-205ENST00000381497 1552 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
USP50Q70EL3 NRXN2-205ENST00000409571 6381 ntAPPRIS ALT2 TSL 5 BASIC21.3■■□□□ 1
USP50Q70EL3 SMIM4-203ENST00000477703 1770 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
USP50Q70EL3 STARD3-219ENST00000580611 1989 ntTSL 5 BASIC21.3■■□□□ 1
USP50Q70EL3 MTFR1L-202ENST00000374301 2099 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
USP50Q70EL3 DCAF4-202ENST00000358377 2024 ntAPPRIS P4 TSL 1 (best) BASIC21.29■■□□□ 1
USP50Q70EL3 UNG-202ENST00000336865 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC21.29■■□□□ 1
USP50Q70EL3 KCNC2-204ENST00000540018 2168 ntAPPRIS ALT2 TSL 2 BASIC21.29■■□□□ 1
USP50Q70EL3 TAF15-215ENST00000605844 2191 ntAPPRIS P3 TSL 1 (best) BASIC21.29■■□□□ 1
USP50Q70EL3 EXO5-202ENST00000358527 1892 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
USP50Q70EL3 CAMKMT-204ENST00000407131 652 ntTSL 3 BASIC21.29■■□□□ 1
USP50Q70EL3 AC092474.2-201ENST00000424288 719 ntBASIC21.29■■□□□ 1
USP50Q70EL3 STT3A-AS1-201ENST00000530526 429 ntTSL 3 BASIC21.29■■□□□ 1
USP50Q70EL3 TMEM106C-214ENST00000550161 976 ntTSL 3 BASIC21.29■■□□□ 1
USP50Q70EL3 LINGO1-AS2-201ENST00000557799 663 ntTSL 1 (best) BASIC21.29■■□□□ 1
USP50Q70EL3 AC016168.1-201ENST00000591422 722 ntTSL 3 BASIC21.29■■□□□ 1
USP50Q70EL3 KCNMA1-252ENST00000639120 2308 ntTSL 5 BASIC21.29■■□□□ 1
USP50Q70EL3 HOXC4-201ENST00000303406 1524 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
USP50Q70EL3 STRADB-201ENST00000194530 2293 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
USP50Q70EL3 CLDND1-203ENST00000394181 2170 ntTSL 1 (best) BASIC21.29■■□□□ 1
USP50Q70EL3 AL137060.1-201ENST00000618151 2648 ntBASIC21.28■■□□□ 1
USP50Q70EL3 ST6GALNAC4-201ENST00000335791 1691 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
USP50Q70EL3 AC055811.2-201ENST00000427497 1693 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
USP50Q70EL3 TRMT6-202ENST00000453074 2239 ntTSL 2 BASIC21.28■■□□□ 1
USP50Q70EL3 PHYHD1-201ENST00000308941 1599 ntTSL 1 (best) BASIC21.28■■□□□ 1
USP50Q70EL3 FAM83D-202ENST00000619850 2361 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
USP50Q70EL3 FAM3A-215ENST00000447601 1800 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
USP50Q70EL3 HMGN4-201ENST00000377575 1225 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
USP50Q70EL3 CD99-202ENST00000381180 530 ntTSL 2 BASIC21.28■■□□□ 1
USP50Q70EL3 CD63-210ENST00000550776 870 ntTSL 5 BASIC21.28■■□□□ 1
USP50Q70EL3 GIPC1-213ENST00000591349 1068 ntTSL 2 BASIC21.28■■□□□ 1
USP50Q70EL3 SLC9A3-AS1-205ENST00000606319 477 ntTSL 3 BASIC21.28■■□□□ 1
USP50Q70EL3 ZEB1-AS1-209ENST00000607455 559 ntTSL 4 BASIC21.28■■□□□ 1
USP50Q70EL3 AC004790.2-201ENST00000623588 572 ntBASIC21.28■■□□□ 1
USP50Q70EL3 ZNF582-207ENST00000619584 2297 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
USP50Q70EL3 DBNDD2-204ENST00000372712 1537 ntAPPRIS P1 TSL 5 BASIC21.28■■□□□ 1
USP50Q70EL3 GMPPA-204ENST00000373908 1501 ntAPPRIS P1 TSL 5 BASIC21.28■■□□□ 1
USP50Q70EL3 DRD2-202ENST00000362072 2789 ntAPPRIS P2 TSL 1 (best) BASIC21.28■■□□□ 1
USP50Q70EL3 PARD3-214ENST00000545693 5962 ntAPPRIS ALT2 TSL 1 (best) BASIC21.28■■□□□ 1
USP50Q70EL3 PTPRM-211ENST00000580170 5941 ntAPPRIS ALT2 TSL 1 (best) BASIC21.27■■□□□ 1
USP50Q70EL3 FDXR-205ENST00000544854 1827 ntTSL 2 BASIC21.27■■□□□ 1
USP50Q70EL3 TMED9-201ENST00000332598 1473 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
USP50Q70EL3 RNF38-204ENST00000357058 5254 ntAPPRIS P1 TSL 5 BASIC21.27■■□□□ 1
USP50Q70EL3 TMEM121B-201ENST00000331437 4954 ntAPPRIS P3 BASIC21.27■■□□□ 1
USP50Q70EL3 AC105285.1-202ENST00000499322 1866 ntTSL 1 (best) BASIC21.27■■□□□ 1
USP50Q70EL3 CLTA-201ENST00000242285 1152 ntAPPRIS P4 TSL 1 (best) BASIC21.27■■□□□ 1
USP50Q70EL3 THAP3-202ENST00000307896 1046 ntAPPRIS ALT2 TSL 2 BASIC21.27■■□□□ 1
USP50Q70EL3 NUPR2-201ENST00000329309 603 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
USP50Q70EL3 GPX7-201ENST00000361314 1228 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
USP50Q70EL3 GPR3-201ENST00000374024 2115 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
USP50Q70EL3 CLTA-203ENST00000396603 1090 ntTSL 1 (best) BASIC21.27■■□□□ 1
USP50Q70EL3 HDAC11-202ENST00000402259 1000 ntTSL 3 BASIC21.27■■□□□ 1
USP50Q70EL3 AL049612.1-201ENST00000427017 694 ntTSL 5 BASIC21.27■■□□□ 1
USP50Q70EL3 AP000695.1-201ENST00000429588 893 ntTSL 3 BASIC21.27■■□□□ 1
USP50Q70EL3 AC103564.2-201ENST00000432853 1299 ntBASIC21.27■■□□□ 1
USP50Q70EL3 INTS11-208ENST00000435064 2148 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
USP50Q70EL3 IRF3-204ENST00000442265 315 ntTSL 1 (best) BASIC21.27■■□□□ 1
USP50Q70EL3 PAWRP1-201ENST00000451083 565 ntBASIC21.27■■□□□ 1
USP50Q70EL3 RPS15P9-201ENST00000494093 319 ntBASIC21.27■■□□□ 1
USP50Q70EL3 NTRK3-206ENST00000540489 2145 ntTSL 5 BASIC21.27■■□□□ 1
USP50Q70EL3 AC108449.3-201ENST00000560714 585 ntTSL 3 BASIC21.27■■□□□ 1
USP50Q70EL3 AC012645.3-201ENST00000568506 470 ntTSL 3 BASIC21.27■■□□□ 1
USP50Q70EL3 AC093512.1-201ENST00000617969 520 ntBASIC21.27■■□□□ 1
USP50Q70EL3 AC073592.5-201ENST00000624854 528 ntBASIC21.27■■□□□ 1
USP50Q70EL3 AL359644.1-202ENST00000637541 571 ntTSL 3 BASIC21.27■■□□□ 1
USP50Q70EL3 LUC7L-221ENST00000629543 1520 ntTSL 5 BASIC21.27■■□□□ 1
USP50Q70EL3 ASMTL-206ENST00000534940 2048 ntTSL 2 BASIC21.27■■□□□ 1
USP50Q70EL3 HSPB9-201ENST00000565659 1922 ntAPPRIS P1 BASIC21.27■■□□□ 1
USP50Q70EL3 MYCN-201ENST00000281043 2602 ntAPPRIS P1 TSL 5 BASIC21.26■□□□□ 0.99
USP50Q70EL3 UBE2J2-201ENST00000347370 2387 ntTSL 3 BASIC21.26■□□□□ 0.99
USP50Q70EL3 KRT85-202ENST00000544265 1387 ntTSL 2 BASIC21.26■□□□□ 0.99
USP50Q70EL3 NMRK2-201ENST00000168977 1126 ntAPPRIS P3 TSL 2 BASIC21.26■□□□□ 0.99
Retrieved 100 of 98,524 protein–RNA pairs in 57.3 ms