Protein–RNA interactions for Protein: Q6ZP82

CCDC141, Coiled-coil domain-containing protein 141, humanhuman

Predictions only

Length 1,450 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC141Q6ZP82 AC034243.1-201ENST00000520838 587 ntTSL 2 BASIC26.93■■□□□ 1.9
CCDC141Q6ZP82 AC006557.2-201ENST00000592985 1240 ntBASIC26.93■■□□□ 1.9
CCDC141Q6ZP82 HCK-202ENST00000375852 2082 ntAPPRIS ALT2 TSL 1 (best) BASIC26.93■■□□□ 1.9
CCDC141Q6ZP82 RBFOX1-222ENST00000585867 1580 ntTSL 2 BASIC26.93■■□□□ 1.9
CCDC141Q6ZP82 ISL2-201ENST00000290759 1881 ntAPPRIS P1 TSL 1 (best) BASIC26.93■■□□□ 1.9
CCDC141Q6ZP82 RCN1-201ENST00000054950 2572 ntAPPRIS P2 TSL 1 (best) BASIC26.93■■□□□ 1.9
CCDC141Q6ZP82 PCDHA4-201ENST00000378125 2328 ntTSL 5 BASIC26.93■■□□□ 1.9
CCDC141Q6ZP82 AL031598.1-201ENST00000561511 1773 ntBASIC26.93■■□□□ 1.9
CCDC141Q6ZP82 AR-204ENST00000504326 3615 ntTSL 1 (best) BASIC26.93■■□□□ 1.9
CCDC141Q6ZP82 MOSPD3-201ENST00000223054 1053 ntAPPRIS P1 TSL 2 BASIC26.93■■□□□ 1.9
CCDC141Q6ZP82 PIGU-202ENST00000374820 1248 ntAPPRIS ALT2 TSL 1 (best) BASIC26.93■■□□□ 1.9
CCDC141Q6ZP82 C22orf39-203ENST00000399568 1005 ntTSL 1 (best) BASIC26.93■■□□□ 1.9
CCDC141Q6ZP82 RNA5SP416-201ENST00000516838 111 ntBASIC26.93■■□□□ 1.9
CCDC141Q6ZP82 AC106782.2-201ENST00000563252 992 ntTSL 3 BASIC26.93■■□□□ 1.9
CCDC141Q6ZP82 ACYP2-209ENST00000607452 831 ntTSL 2 BASIC26.93■■□□□ 1.9
CCDC141Q6ZP82 CSF3-202ENST00000331769 1673 ntAPPRIS ALT2 TSL 1 (best) BASIC26.92■■□□□ 1.9
CCDC141Q6ZP82 UQCC3-201ENST00000377953 1947 ntAPPRIS P1 TSL 1 (best) BASIC26.92■■□□□ 1.9
CCDC141Q6ZP82 ADARB1-205ENST00000437626 5032 ntTSL 1 (best) BASIC26.92■■□□□ 1.9
CCDC141Q6ZP82 CD19-202ENST00000538922 1957 ntAPPRIS ALT2 TSL 5 BASIC26.92■■□□□ 1.9
CCDC141Q6ZP82 LINC01011-201ENST00000445000 2811 ntTSL 2 BASIC26.92■■□□□ 1.9
CCDC141Q6ZP82 METTL21C-201ENST00000267273 1088 ntAPPRIS P1 TSL 1 (best) BASIC26.92■■□□□ 1.9
CCDC141Q6ZP82 ATPIF1-201ENST00000335514 494 ntAPPRIS P1 TSL 1 (best) BASIC26.92■■□□□ 1.9
CCDC141Q6ZP82 AL512785.2-202ENST00000367932 830 ntTSL 4 BASIC26.92■■□□□ 1.9
CCDC141Q6ZP82 ELK2BP-201ENST00000415014 1224 ntBASIC26.92■■□□□ 1.9
CCDC141Q6ZP82 MRNIP-205ENST00000518235 1244 ntAPPRIS ALT2 TSL 2 BASIC26.92■■□□□ 1.9
CCDC141Q6ZP82 AC005256.1-202ENST00000592934 415 ntTSL 2 BASIC26.92■■□□□ 1.9
CCDC141Q6ZP82 SMIM22-210ENST00000615471 928 ntAPPRIS ALT2 TSL 3 BASIC26.92■■□□□ 1.9
CCDC141Q6ZP82 ZXDC-201ENST00000336332 2579 ntAPPRIS ALT2 TSL 1 (best) BASIC26.92■■□□□ 1.9
CCDC141Q6ZP82 AP001476.1-201ENST00000451618 2198 ntTSL 2 BASIC26.92■■□□□ 1.9
CCDC141Q6ZP82 RASSF1-210ENST00000616212 1842 ntTSL 2 BASIC26.92■■□□□ 1.9
CCDC141Q6ZP82 SRSF2-205ENST00000508921 1390 ntTSL 2 BASIC26.92■■□□□ 1.9
CCDC141Q6ZP82 AP001351.1-201ENST00000501397 1865 ntTSL 2 BASIC26.92■■□□□ 1.9
CCDC141Q6ZP82 PLEKHA8-203ENST00000396259 2840 ntTSL 2 BASIC26.92■■□□□ 1.9
CCDC141Q6ZP82 INO80E-207ENST00000563197 2103 ntAPPRIS P1 TSL 1 (best) BASIC26.91■■□□□ 1.9
CCDC141Q6ZP82 IRF3-203ENST00000377139 1613 ntAPPRIS P1 TSL 1 (best) BASIC26.91■■□□□ 1.9
CCDC141Q6ZP82 SWSAP1-201ENST00000312423 1684 ntAPPRIS P1 TSL 1 (best) BASIC26.91■■□□□ 1.9
CCDC141Q6ZP82 DGKZ-203ENST00000421244 2862 ntAPPRIS ALT2 TSL 1 (best) BASIC26.91■■□□□ 1.9
CCDC141Q6ZP82 AL355310.2-201ENST00000369843 688 ntTSL 3 BASIC26.91■■□□□ 1.9
CCDC141Q6ZP82 C6orf48-203ENST00000375638 847 ntAPPRIS P1 TSL 2 BASIC26.91■■□□□ 1.9
CCDC141Q6ZP82 C6orf48-207ENST00000375642 962 ntAPPRIS P1 TSL 2 BASIC26.91■■□□□ 1.9
CCDC141Q6ZP82 CST3-201ENST00000376925 873 ntAPPRIS P1 TSL 1 (best) BASIC26.91■■□□□ 1.9
CCDC141Q6ZP82 GNB2-205ENST00000419828 1285 ntTSL 5 BASIC26.91■■□□□ 1.9
CCDC141Q6ZP82 AC016999.1-201ENST00000447880 452 ntTSL 3 BASIC26.91■■□□□ 1.9
CCDC141Q6ZP82 NDUFA6-202ENST00000498737 1256 ntTSL 1 (best) BASIC26.91■■□□□ 1.9
CCDC141Q6ZP82 NDUFA6-203ENST00000602404 1080 ntAPPRIS P1 TSL 1 (best) BASIC26.91■■□□□ 1.9
CCDC141Q6ZP82 PPP1R7-202ENST00000272983 1954 ntTSL 2 BASIC26.91■■□□□ 1.9
CCDC141Q6ZP82 KNOP1-205ENST00000568230 1311 ntAPPRIS ALT2 TSL 5 BASIC26.91■■□□□ 1.9
CCDC141Q6ZP82 CNTNAP3B-202ENST00000341990 2666 ntTSL 2 BASIC26.91■■□□□ 1.9
CCDC141Q6ZP82 REEP2-202ENST00000378339 2170 ntAPPRIS ALT1 TSL 1 (best) BASIC26.91■■□□□ 1.9
CCDC141Q6ZP82 TRABD-203ENST00000395827 2172 ntAPPRIS P3 TSL 5 BASIC26.91■■□□□ 1.9
CCDC141Q6ZP82 ENTPD8-202ENST00000371506 2222 ntAPPRIS P1 TSL 5 BASIC26.91■■□□□ 1.9
CCDC141Q6ZP82 CLDN15-208ENST00000611078 1509 ntTSL 5 BASIC26.91■■□□□ 1.9
CCDC141Q6ZP82 PIANP-204ENST00000540656 2432 ntAPPRIS P3 TSL 2 BASIC26.91■■□□□ 1.9
CCDC141Q6ZP82 CBSL-210ENST00000624934 1992 ntTSL 5 BASIC26.9■■□□□ 1.9
CCDC141Q6ZP82 BRSK1-201ENST00000309383 3079 ntAPPRIS P1 TSL 1 (best) BASIC26.9■■□□□ 1.9
CCDC141Q6ZP82 WNT7B-202ENST00000409496 2285 ntAPPRIS ALT1 TSL 2 BASIC26.9■■□□□ 1.9
CCDC141Q6ZP82 COL9A3-201ENST00000343916 2485 ntAPPRIS P1 TSL 1 (best) BASIC26.9■■□□□ 1.9
CCDC141Q6ZP82 ANKRD54-202ENST00000406423 954 ntTSL 3 BASIC26.9■■□□□ 1.9
CCDC141Q6ZP82 DNAJB3-201ENST00000446806 729 ntBASIC26.9■■□□□ 1.9
CCDC141Q6ZP82 AL133375.1-201ENST00000500590 980 ntTSL 5 BASIC26.9■■□□□ 1.9
CCDC141Q6ZP82 PLA2G12A-202ENST00000502283 1189 ntAPPRIS ALT2 TSL 1 (best) BASIC26.9■■□□□ 1.9
CCDC141Q6ZP82 EEF1D-238ENST00000531621 840 ntTSL 3 BASIC26.9■■□□□ 1.9
CCDC141Q6ZP82 C2orf27B-201ENST00000623129 1325 ntTSL 1 (best) BASIC26.9■■□□□ 1.9
CCDC141Q6ZP82 SYCE1-203ENST00000368517 1377 ntAPPRIS P3 TSL 5 BASIC26.9■■□□□ 1.9
CCDC141Q6ZP82 FOXP3-206ENST00000557224 1371 ntTSL 2 BASIC26.9■■□□□ 1.9
CCDC141Q6ZP82 PLEKHH3-201ENST00000293349 2987 ntAPPRIS ALT1 TSL 5 BASIC26.9■■□□□ 1.9
CCDC141Q6ZP82 HOXC6-201ENST00000243108 1733 ntAPPRIS P1 TSL 1 (best) BASIC26.9■■□□□ 1.9
CCDC141Q6ZP82 REEP4-201ENST00000306306 1710 ntAPPRIS P1 TSL 1 (best) BASIC26.9■■□□□ 1.9
CCDC141Q6ZP82 LRRC43-201ENST00000339777 2028 ntAPPRIS P2 TSL 5 BASIC26.9■■□□□ 1.9
CCDC141Q6ZP82 PSMB11-201ENST00000408907 2110 ntAPPRIS P1 BASIC26.9■■□□□ 1.9
CCDC141Q6ZP82 TEX22-201ENST00000451127 2571 ntAPPRIS P1 TSL 2 BASIC26.9■■□□□ 1.9
CCDC141Q6ZP82 AKT2-210ENST00000424901 5170 ntTSL 5 BASIC26.9■■□□□ 1.9
CCDC141Q6ZP82 DPP10-203ENST00000393147 2758 ntAPPRIS ALT2 TSL 1 (best) BASIC26.9■■□□□ 1.9
CCDC141Q6ZP82 PDE9A-205ENST00000349112 1616 ntTSL 1 (best) BASIC26.89■■□□□ 1.9
CCDC141Q6ZP82 PRPS1-203ENST00000372428 1748 ntTSL 2 BASIC26.89■■□□□ 1.9
CCDC141Q6ZP82 FPGS-203ENST00000373247 2279 ntAPPRIS P1 TSL 1 (best) BASIC26.89■■□□□ 1.9
CCDC141Q6ZP82 ARHGAP22-203ENST00000374172 2380 ntTSL 2 BASIC26.89■■□□□ 1.9
CCDC141Q6ZP82 MOB1B-202ENST00000396051 1107 ntTSL 2 BASIC26.89■■□□□ 1.9
CCDC141Q6ZP82 RGS11-204ENST00000397770 2390 ntAPPRIS P1 TSL 1 (best) BASIC26.89■■□□□ 1.9
CCDC141Q6ZP82 LINC00894-202ENST00000425602 1597 ntTSL 2 BASIC26.89■■□□□ 1.9
CCDC141Q6ZP82 LMCD1-204ENST00000426878 1431 ntTSL 2 BASIC26.89■■□□□ 1.9
CCDC141Q6ZP82 ZNF295-AS1-202ENST00000429739 783 ntTSL 1 (best) BASIC26.89■■□□□ 1.9
CCDC141Q6ZP82 TMPRSS5-205ENST00000538955 1956 ntAPPRIS ALT2 TSL 1 (best) BASIC26.89■■□□□ 1.9
CCDC141Q6ZP82 AC002347.1-201ENST00000569543 541 ntBASIC26.89■■□□□ 1.9
CCDC141Q6ZP82 AOC3-204ENST00000591562 2522 ntTSL 2 BASIC26.89■■□□□ 1.9
CCDC141Q6ZP82 CRB3-204ENST00000600229 1078 ntAPPRIS ALT2 TSL 2 BASIC26.89■■□□□ 1.9
CCDC141Q6ZP82 AL139424.1-201ENST00000607572 797 ntBASIC26.89■■□□□ 1.9
CCDC141Q6ZP82 LINC00623-201ENST00000613486 486 ntTSL 5 BASIC26.89■■□□□ 1.9
CCDC141Q6ZP82 BIN2-210ENST00000615107 2255 ntAPPRIS P1 TSL 1 (best) BASIC26.89■■□□□ 1.9
CCDC141Q6ZP82 TPCN2-208ENST00000637342 2856 ntTSL 5 BASIC26.89■■□□□ 1.9
CCDC141Q6ZP82 MEN1-208ENST00000394374 3155 ntAPPRIS P3 TSL 5 BASIC26.89■■□□□ 1.89
CCDC141Q6ZP82 CHTF8-203ENST00000448552 2903 ntAPPRIS P1 TSL 1 (best) BASIC26.89■■□□□ 1.89
CCDC141Q6ZP82 SMIM10L2B-201ENST00000433425 2737 ntAPPRIS P1 TSL 1 (best) BASIC26.89■■□□□ 1.89
CCDC141Q6ZP82 YTHDC2-207ENST00000515883 2629 ntTSL 1 (best) BASIC26.89■■□□□ 1.89
CCDC141Q6ZP82 NEIL3-201ENST00000264596 2408 ntAPPRIS P1 TSL 1 (best) BASIC26.89■■□□□ 1.89
CCDC141Q6ZP82 TULP1-201ENST00000229771 2162 ntAPPRIS P2 TSL 1 (best) BASIC26.89■■□□□ 1.89
CCDC141Q6ZP82 MOXD1-203ENST00000392401 2191 ntTSL 4 BASIC26.89■■□□□ 1.89
CCDC141Q6ZP82 IAH1-202ENST00000470914 2137 ntTSL 1 (best) BASIC26.89■■□□□ 1.89
CCDC141Q6ZP82 LDHAL6A-202ENST00000396213 1716 ntAPPRIS P1 TSL 1 (best) BASIC26.89■■□□□ 1.89
CCDC141Q6ZP82 KIF25-203ENST00000443060 1613 ntAPPRIS P1 TSL 5 BASIC26.88■■□□□ 1.89
Retrieved 100 of 98,524 protein–RNA pairs in 45.9 ms