Protein–RNA interactions for Protein: Q6PJG6

BRAT1, BRCA1-associated ATM activator 1, humanhuman

Predictions only

Length 821 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BRAT1Q6PJG6 RTBDN-213ENST00000592204 1024 ntAPPRIS ALT2 TSL 1 (best) BASIC18.14■□□□□ 0.49
BRAT1Q6PJG6 KCNQ2-218ENST00000629676 2399 ntTSL 5 BASIC18.14■□□□□ 0.49
BRAT1Q6PJG6 AC132938.6-201ENST00000623828 1655 ntBASIC18.14■□□□□ 0.49
BRAT1Q6PJG6 TAX1BP3-202ENST00000611779 1302 ntTSL 2 BASIC18.14■□□□□ 0.49
BRAT1Q6PJG6 BMP8B-201ENST00000372827 4822 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
BRAT1Q6PJG6 CCDC7-203ENST00000362006 2133 ntAPPRIS P2 TSL 1 (best) BASIC18.14■□□□□ 0.49
BRAT1Q6PJG6 ABHD14B-204ENST00000461108 1397 ntTSL 2 BASIC18.14■□□□□ 0.49
BRAT1Q6PJG6 CSF3-206ENST00000577675 1360 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
BRAT1Q6PJG6 CDK10-202ENST00000353379 1798 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
BRAT1Q6PJG6 TADA3-202ENST00000343450 2554 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
BRAT1Q6PJG6 SAMD11-210ENST00000616016 2391 ntTSL 5 BASIC18.13■□□□□ 0.49
BRAT1Q6PJG6 SAMD11-215ENST00000618779 2368 ntAPPRIS ALT2 TSL 5 BASIC18.13■□□□□ 0.49
BRAT1Q6PJG6 CASR-204ENST00000638421 5088 ntAPPRIS P1 TSL 5 BASIC18.13■□□□□ 0.49
BRAT1Q6PJG6 CHTF8-203ENST00000448552 2903 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
BRAT1Q6PJG6 AC138356.1-201ENST00000330539 2086 ntTSL 2 BASIC18.13■□□□□ 0.49
BRAT1Q6PJG6 PLA2G2F-201ENST00000375102 2723 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
BRAT1Q6PJG6 SNRPA1-201ENST00000254193 1055 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
BRAT1Q6PJG6 SSSCA1-201ENST00000309328 698 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
BRAT1Q6PJG6 ISCU-201ENST00000311893 994 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
BRAT1Q6PJG6 RASGRP2-208ENST00000394428 444 ntTSL 2 BASIC18.13■□□□□ 0.49
BRAT1Q6PJG6 RPL36-202ENST00000394580 556 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
BRAT1Q6PJG6 AGBL5-AS1-201ENST00000444217 407 ntTSL 5 BASIC18.13■□□□□ 0.49
BRAT1Q6PJG6 AP000867.3-201ENST00000524675 377 ntBASIC18.13■□□□□ 0.49
BRAT1Q6PJG6 CHMP2A-208ENST00000601220 885 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
BRAT1Q6PJG6 BCL2L12-210ENST00000611631 1259 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
BRAT1Q6PJG6 Metazoa_SRP.104-201ENST00000622099 280 ntBASIC18.13■□□□□ 0.49
BRAT1Q6PJG6 LINC00960-201ENST00000463183 1333 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
BRAT1Q6PJG6 TIMM13-201ENST00000215570 1973 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
BRAT1Q6PJG6 POLD4-205ENST00000529704 1486 ntTSL 2 BASIC18.13■□□□□ 0.49
BRAT1Q6PJG6 CYTH1-209ENST00000589296 2159 ntTSL 5 BASIC18.13■□□□□ 0.49
BRAT1Q6PJG6 DLK2-203ENST00000372488 1590 ntAPPRIS P3 TSL 1 (best) BASIC18.13■□□□□ 0.49
BRAT1Q6PJG6 KRT6C-201ENST00000252250 2289 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
BRAT1Q6PJG6 KRT6B-201ENST00000252252 2282 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
BRAT1Q6PJG6 LRRC61-201ENST00000323078 1684 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
BRAT1Q6PJG6 KDM4B-202ENST00000381759 3058 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
BRAT1Q6PJG6 MAPK8IP3-202ENST00000356010 4456 ntTSL 5 BASIC18.12■□□□□ 0.49
BRAT1Q6PJG6 TM9SF1-206ENST00000528669 2425 ntTSL 5 BASIC18.12■□□□□ 0.49
BRAT1Q6PJG6 AC135776.1-201ENST00000319817 2481 ntBASIC18.12■□□□□ 0.49
BRAT1Q6PJG6 KLHL40-201ENST00000287777 2517 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
BRAT1Q6PJG6 KCNA3-201ENST00000369769 2569 ntAPPRIS P1 BASIC18.12■□□□□ 0.49
BRAT1Q6PJG6 FCMR-201ENST00000367091 1950 ntAPPRIS P3 TSL 1 (best) BASIC18.12■□□□□ 0.49
BRAT1Q6PJG6 LDHD-202ENST00000450168 1966 ntAPPRIS ALT2 TSL 1 (best) BASIC18.12■□□□□ 0.49
BRAT1Q6PJG6 AL096828.2-201ENST00000567259 1965 ntBASIC18.12■□□□□ 0.49
BRAT1Q6PJG6 ZKSCAN7-205ENST00000426540 2791 ntAPPRIS P1 TSL 2 BASIC18.12■□□□□ 0.49
BRAT1Q6PJG6 SEPT8-201ENST00000296873 4394 ntAPPRIS P2 TSL 1 (best) BASIC18.12■□□□□ 0.49
BRAT1Q6PJG6 TMEM129-202ENST00000382936 2810 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
BRAT1Q6PJG6 MSC-201ENST00000325509 2023 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
BRAT1Q6PJG6 CCDC43-201ENST00000315286 2082 ntAPPRIS P2 TSL 1 (best) BASIC18.12■□□□□ 0.49
BRAT1Q6PJG6 INPP5F-203ENST00000369081 874 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
BRAT1Q6PJG6 LINC01315-202ENST00000424852 1142 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
BRAT1Q6PJG6 PDE6B-202ENST00000429163 2120 ntTSL 2 BASIC18.12■□□□□ 0.49
BRAT1Q6PJG6 MTCL1P1-201ENST00000446207 792 ntBASIC18.12■□□□□ 0.49
BRAT1Q6PJG6 ENDOV-205ENST00000518644 625 ntTSL 4 BASIC18.12■□□□□ 0.49
BRAT1Q6PJG6 LINC02237-202ENST00000521904 477 ntTSL 3 BASIC18.12■□□□□ 0.49
BRAT1Q6PJG6 APBB1-215ENST00000608394 2128 ntTSL 5 BASIC18.12■□□□□ 0.49
BRAT1Q6PJG6 APBB1-222ENST00000610474 2147 ntTSL 5 BASIC18.12■□□□□ 0.49
BRAT1Q6PJG6 DTNBP1-203ENST00000355917 1359 ntTSL 5 BASIC18.12■□□□□ 0.49
BRAT1Q6PJG6 IDS-202ENST00000370441 1399 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
BRAT1Q6PJG6 GNAS-AS1-202ENST00000443966 2341 ntTSL 5 BASIC18.12■□□□□ 0.49
BRAT1Q6PJG6 GTF3C5-202ENST00000372097 2406 ntAPPRIS P3 TSL 1 (best) BASIC18.12■□□□□ 0.49
BRAT1Q6PJG6 PTTG1IP-203ENST00000397887 2413 ntTSL 4 BASIC18.12■□□□□ 0.49
BRAT1Q6PJG6 PDLIM2-206ENST00000409141 1463 ntTSL 2 BASIC18.12■□□□□ 0.49
BRAT1Q6PJG6 DHRS4L2-203ENST00000534993 1450 ntTSL 3 BASIC18.12■□□□□ 0.49
BRAT1Q6PJG6 HNRNPM-201ENST00000325495 2494 ntAPPRIS P4 TSL 1 (best) BASIC18.12■□□□□ 0.49
BRAT1Q6PJG6 NTRK1-201ENST00000358660 2492 ntAPPRIS ALT2 TSL 2 BASIC18.12■□□□□ 0.49
BRAT1Q6PJG6 CEP78-201ENST00000277082 2542 ntAPPRIS ALT2 TSL 2 BASIC18.12■□□□□ 0.49
BRAT1Q6PJG6 RNF139-201ENST00000303545 2637 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
BRAT1Q6PJG6 AC027312.1-201ENST00000523591 1571 ntTSL 5 BASIC18.12■□□□□ 0.49
BRAT1Q6PJG6 ACP5-201ENST00000218758 1630 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
BRAT1Q6PJG6 TM2D2-201ENST00000397070 1631 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
BRAT1Q6PJG6 FOXP1-214ENST00000493089 2703 ntAPPRIS ALT1 TSL 2 BASIC18.12■□□□□ 0.49
BRAT1Q6PJG6 UBXN2A-201ENST00000309033 6066 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
BRAT1Q6PJG6 INF2-204ENST00000398337 1689 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
BRAT1Q6PJG6 ZIC1-201ENST00000282928 5241 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
BRAT1Q6PJG6 USP25-204ENST00000400183 5341 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
BRAT1Q6PJG6 POR-209ENST00000439269 1858 ntTSL 2 BASIC18.12■□□□□ 0.49
BRAT1Q6PJG6 TBC1D3I-202ENST00000618620 1900 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
BRAT1Q6PJG6 NEUROD2-201ENST00000302584 2041 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
BRAT1Q6PJG6 KCNN4-209ENST00000615047 2029 ntTSL 5 BASIC18.11■□□□□ 0.49
BRAT1Q6PJG6 ANKS3-202ENST00000446014 2265 ntTSL 5 BASIC18.11■□□□□ 0.49
BRAT1Q6PJG6 CARMIL2-201ENST00000334583 4687 ntAPPRIS P3 TSL 1 (best) BASIC18.11■□□□□ 0.49
BRAT1Q6PJG6 OTUD1-201ENST00000376495 2933 ntAPPRIS P1 BASIC18.11■□□□□ 0.49
BRAT1Q6PJG6 AC026471.1-201ENST00000564629 3026 ntBASIC18.11■□□□□ 0.49
BRAT1Q6PJG6 PFN1-201ENST00000225655 1291 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
BRAT1Q6PJG6 STX8-201ENST00000306357 1246 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
BRAT1Q6PJG6 C21orf2-201ENST00000325223 1283 ntAPPRIS ALT2 TSL 1 (best) BASIC18.11■□□□□ 0.49
BRAT1Q6PJG6 ANKRD37-201ENST00000335174 1141 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
BRAT1Q6PJG6 NT5E-202ENST00000369646 974 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
BRAT1Q6PJG6 IPPK-202ENST00000375522 882 ntTSL 3 BASIC18.11■□□□□ 0.49
BRAT1Q6PJG6 AL845331.1-201ENST00000424978 1190 ntBASIC18.11■□□□□ 0.49
BRAT1Q6PJG6 IFT27-205ENST00000433985 1095 ntAPPRIS ALT1 TSL 1 (best) BASIC18.11■□□□□ 0.49
BRAT1Q6PJG6 NUS1P1-201ENST00000446295 882 ntBASIC18.11■□□□□ 0.49
BRAT1Q6PJG6 KRT17P6-201ENST00000453795 1220 ntBASIC18.11■□□□□ 0.49
BRAT1Q6PJG6 ZNF655-218ENST00000454654 571 ntTSL 4 BASIC18.11■□□□□ 0.49
BRAT1Q6PJG6 AC104819.1-201ENST00000504587 486 ntBASIC18.11■□□□□ 0.49
BRAT1Q6PJG6 DUTP2-201ENST00000519164 463 ntBASIC18.11■□□□□ 0.49
BRAT1Q6PJG6 CCDC61-201ENST00000536603 1282 ntAPPRIS ALT2 TSL 1 (best) BASIC18.11■□□□□ 0.49
BRAT1Q6PJG6 ABR-204ENST00000543210 1049 ntTSL 2 BASIC18.11■□□□□ 0.49
BRAT1Q6PJG6 TSFM-208ENST00000543727 651 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
BRAT1Q6PJG6 AC079385.1-201ENST00000551505 570 ntTSL 4 BASIC18.11■□□□□ 0.49
Retrieved 100 of 98,524 protein–RNA pairs in 43.7 ms